RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SF3B6Q9Y3B4 125 aaKnown RBP11.59□□□□□ -0.55
COL1A1-201ENST00000225964 CLDN34H7C241 214 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 J3QT63 122 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 FAM106CPP0CH98 169 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 ZNF137PP52743 207 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 ISXQ2M1V0 245 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 PRSS54Q6PEW0 395 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 OR1K1Q8NGR3 316 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 OR1L8Q8NGR8 309 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 MRGPRFQ96AM1 343 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 MS4A10Q96PG2 267 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 CCL13Q99616 98 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 NAT8Q9UHE5 227 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 HELTA6NFD8 242 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 TCTEX1D1Q8N7M0 179 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 OR8A1Q8NGG7 326 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 OR10D4PQ8NGN7 298 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 HMGCLL1Q8TB92 370 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 C10orf35Q96D05 121 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 MBPP02686 304 aaPredicted RBP11.59□□□□□ -0.55
COL1A1-201ENST00000225964 TEX30Q5JUR7 227 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 LINC00596Q86U02 117 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 NFAM1Q8NET5 270 aaPredicted RBP11.59□□□□□ -0.55
COL1A1-201ENST00000225964 WDR54Q9H977 334 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 P2RY1P47900 373 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 FHL5Q5TD97 284 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 MRM1Q6IN84 353 aaKnown RBP11.59□□□□□ -0.55
COL1A1-201ENST00000225964 NUDT16L1Q9BRJ7 211 aaKnown RBP11.59□□□□□ -0.55
COL1A1-201ENST00000225964 LPAR5Q9H1C0 372 aa11.59□□□□□ -0.55
COL1A1-201ENST00000225964 CGB1A6NKQ9 187 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 ZNHIT1O43257 154 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 CLDN14O95500 239 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 FAM157CP0CG43 387 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 TM4SF20Q53R12 229 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 KRTCAP3Q53RY4 240 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 LRP11Q86VZ4 500 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 METTL26Q96S19 204 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 ZNF385DQ9H6B1 395 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 DUXBA0A1W2PPF3 345 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 OR4C46A6NHA9 309 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 PSG2P11465 335 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 GFRA1P56159 465 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 LY6EQ16553 131 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 OR10J6PQ8NGY7 276 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 SOSTQ9BQB4 213 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 M0R3E3 92 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 PRDX2P32119 198 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 SMAGPQ0VAQ4 97 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 C1orf53Q5VUE5 145 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 C9orf40Q8IXQ3 194 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 IGHV3-72A0A0B4J1Y9 119 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 RBFOX3A6NFN3 312 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 FXYD1O00168 92 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 SRSF9Q13242 221 aaKnown RBP eCLIP11.58□□□□□ -0.56
COL1A1-201ENST00000225964 KIAA0040Q15053 153 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 LGALSLQ3ZCW2 172 aaPredicted RBP11.58□□□□□ -0.56
COL1A1-201ENST00000225964 LIMS2Q7Z4I7 341 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 OR5A2Q8NGI9 324 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 ANKRD20A5PA0PJZ0 165 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 NKX2-8O15522 239 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 ADAP1O75689 374 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 ZP3P21754 424 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 TMEM33P57088 247 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 TEX29Q8N6K0 151 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 ZNF738Q8NE65 137 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 OIT3Q8WWZ8 545 aa11.58□□□□□ -0.56
COL1A1-201ENST00000225964 C5orf67F2Z3F1 127 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 DEDDO75618 318 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 TTRP02766 147 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 GCSHP23434 173 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 ZNF488Q96MN9 340 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 J3QR06 171 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 GALP22466 123 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 SCAND1P57086 179 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 PMS2CLQ68D20 193 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 AMMECR1LQ6DCA0 310 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 RPS4Y2Q8TD47 263 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 ADIPOR1Q96A54 375 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 RPL36A-HNRNPH2H7BZ11 118 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 K7N7A8 449 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 SULT1A2P50226 295 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 FOXL2P58012 376 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 HLA-DRB5Q30154 266 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 OR10G8Q8NGN5 311 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 SCN9AQ15858 1988 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 PSG6Q00889 435 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 FAM24BQ8N5W8 94 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 SYT8Q8NBV8 401 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 ANAPC16Q96DE5 110 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 CISD1Q9NZ45 108 aaKnown RBP11.57□□□□□ -0.56
COL1A1-201ENST00000225964 METTL1Q9UBP6 276 aaKnown RBP11.57□□□□□ -0.56
COL1A1-201ENST00000225964 IGKV3D-11A0A0A0MRZ8 115 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 IGHV1-45A0A0A0MS14 117 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 FFAR1O14842 300 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 IGKV3-11P04433 115 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 NAT2P11245 290 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 NUBP1P53384 320 aa11.57□□□□□ -0.56
COL1A1-201ENST00000225964 MRPL54Q6P161 138 aaKnown RBP11.57□□□□□ -0.56
COL1A1-201ENST00000225964 PPYP01298 95 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms