RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	CDC42EP4	Q9H3Q1	356 aa	Known RBP	4.41	□□□□□ -1.7
SMARCA2-238	ENST00000635273	MMACHC	Q9Y4U1	282 aa		4.41	□□□□□ -1.7
SMARCA2-238	ENST00000635273	HEATR5A	Q86XA9	2040 aa		4.4	□□□□□ -1.7
SMARCA2-238	ENST00000635273	ABCA2	Q9BZC7	2435 aa		4.4	□□□□□ -1.7
SMARCA2-238	ENST00000635273	IGLV1-36	A0A0B4J1U3	117 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273		A6NDX4	124 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RAD51C	O43502	376 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	KRT16	P08779	473 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	GGT1	P19440	569 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CXCL5	P42830	114 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	TAS2R39	P59534	338 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	POU2AF1	Q16633	256 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	PIGG	Q5H8A4	983 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	FAM45BP	Q6NSW5	357 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	OPN5	Q6U736	354 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	MRPL21	Q7Z2W9	205 aa	Known RBP	4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ZNF429	Q86V71	674 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RNF175	Q8N4F7	328 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273		Q8N9W7	124 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	WFDC11	Q8NEX6	87 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	FAM45A	Q8TCE6	357 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ZNF721	Q8TF20	911 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	OR51B5	Q9H339	312 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ZC4H2	Q9NQZ6	224 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RPS6KB2	Q9UBS0	482 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ARID1A	O14497	2285 aa		4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.4	□□□□□ -1.71
SMARCA2-238	ENST00000635273	MED12L	Q86YW9	2145 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	FLNA	P21333	2647 aa	Known RBP	4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	NCBP2L	A6PVI3	153 aa	Known RBP	4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	PGRMC1	O00264	195 aa	Known RBP	4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	SS18L1	O75177	396 aa	Predicted RBP	4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	NR2C1	P13056	603 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	GABRA1	P14867	456 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CSNK2A2	P19784	350 aa	Predicted RBP	4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	IVD	P26440	423 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CARD18	P57730	90 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	SLAMF1	Q13291	335 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	OR4D1	Q15615	310 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RPEL1	Q2QD12	228 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ZNF791	Q3KP31	576 aa	Predicted RBP	4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	SLC25A35	Q3KQZ1	300 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	LCE3C	Q5T5A8	94 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	GPR107	Q5VW38	600 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	C12orf54	Q6X4T0	127 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CBLN2	Q8IUK8	224 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	LRRC8A	Q8IWT6	810 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	TTL	Q8NG68	377 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	OR51G1	Q8NGK1	321 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	TMEM230	Q96A57	120 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CREB3L1	Q96BA8	519 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	PROK2	Q9HC23	129 aa		4.39	□□□□□ -1.71
SMARCA2-238	ENST00000635273	TRIM49D1	C9J1S8	452 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CD5L	O43866	347 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	STK16	O75716	305 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	EPPIN	O95925	133 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	OXT	P01178	125 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	C1QA	P02745	245 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	FABP3	P05413	133 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RAB3B	P20337	219 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	HIST1H1T	P22492	207 aa	Predicted RBP	4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	OMG	P23515	440 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CEACAM6	P40199	344 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	SSR2	P43308	183 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RPS10	P46783	165 aa	Known RBP	4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ZNF136	P52737	540 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ZNF138	P52744	262 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	MRPS25	P82663	173 aa	Known RBP	4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	IFT88	Q13099	833 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	DEFB113	Q30KQ7	82 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	TPTE2P1	Q5T6R2	138 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	MED27	Q6P2C8	311 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	MBOAT2	Q6ZWT7	520 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	SLC35F6	Q8N357	371 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	FBXO36	Q8NEA4	188 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	OR52E2	Q8NGJ4	325 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	OR8K3	Q8NH51	312 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RNF138	Q8WVD3	245 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	APH1B	Q8WW43	257 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	ANKRD7	Q92527	254 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	RNASE6	Q93091	150 aa	Known RBP	4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	APH1A	Q96BI3	265 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	DOHH	Q9BU89	302 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	MS4A8	Q9BY19	250 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	BOK	Q9UMX3	212 aa	Predicted RBP	4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	PSG8	Q9UQ74	426 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	DSCAM	O60469	2012 aa		4.38	□□□□□ -1.71
SMARCA2-238	ENST00000635273	JMJD1C	Q15652	2540 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	IGHV3-64D	A0A0J9YX35	117 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273		A0A1W2PPV4	95 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	KRTAP9-6	A8MVA2	160 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	EEF1E1-BLOC1S5	C9J1V9	151 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	PLPP1	O14494	284 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	TP53I11	O14683	189 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	EEF1E1	O43324	174 aa	Known RBP	4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	FARS2	O95363	451 aa	Known RBP	4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	GPR75	O95800	540 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	MB	P02144	154 aa		4.37	□□□□□ -1.71
SMARCA2-238	ENST00000635273	IGKV3-11	P04433	115 aa		4.37	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms