RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 CD177Q8N6Q3 437 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 KIR3DL3Q8N743 410 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 C3orf56Q8N813 242 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 OR51T1Q8NGJ9 327 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 FAM46BQ96A09 425 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 SDSLQ96GA7 329 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 DMRTB1Q96MA1 342 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 BANF2Q9H503 90 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 HES4Q9HCC6 221 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 SIRT7Q9NRC8 400 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 EXTL2Q9UBQ6 330 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 ZNF222Q9UK12 451 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 MAB21L2Q9Y586 359 aa11.9□□□□□ -0.5
COMMD4-225ENST00000569245 FAM90A10PA6NDY2 464 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM90A18PA6NE21 464 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM90A16PA6NEW6 464 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FABP12A6NFH5 140 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM90A20PA6NIJ5 464 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM90A8PA6NJQ4 464 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM90A7PA6NKC0 464 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM90A22PA8MWA6 464 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM90A12PA8MX19 464 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM90A5PA8MXJ8 464 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM90A23PA8MXZ1 464 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 F8VVB4 439 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 F8VWA3 439 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 HOXA3O43365 443 aaPredicted RBP11.89□□□□□ -0.51
COMMD4-225ENST00000569245 XRCC3O43542 346 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM90A15PP0C7V4 464 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM90A13PP0C7W8 464 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM90A14PP0C7W9 464 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM90A24PP0C7X0 464 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 MNDAP41218 407 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 CEBPDP49716 269 aaPredicted RBP11.89□□□□□ -0.51
COMMD4-225ENST00000569245 PRB3Q04118 309 aaPredicted RBP11.89□□□□□ -0.51
COMMD4-225ENST00000569245 RAB12Q6IQ22 244 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 BAIAP2L2Q6UXY1 529 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM58AQ8N1B3 248 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 ZNF561Q8N587 486 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 OR4M1Q8NGD0 313 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 C8orf46Q8TAG6 207 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 Q96M66 194 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 SELENOIQ9C0D9 397 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 ATG5Q9H1Y0 275 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 HMG20AQ9NP66 347 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 DIABLOQ9NR28 239 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 RBFOX1Q9NWB1 397 aaKnown RBP11.89□□□□□ -0.51
COMMD4-225ENST00000569245 FAM96BQ9Y3D0 163 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 V9GYH0 126 aa11.89□□□□□ -0.51
COMMD4-225ENST00000569245 TRBV23-1A0A0A0MS06 115 aa11.88□□□□□ -0.51
COMMD4-225ENST00000569245 A0A0A6YYD4 124 aa11.88□□□□□ -0.51
COMMD4-225ENST00000569245 FOXI3A8MTJ6 420 aaPredicted RBP11.88□□□□□ -0.51
COMMD4-225ENST00000569245 CLDN34H7C241 214 aa11.88□□□□□ -0.51
COMMD4-225ENST00000569245 RAB27BO00194 218 aa11.88□□□□□ -0.51
COMMD4-225ENST00000569245 RNASE1P07998 156 aaKnown RBP11.88□□□□□ -0.51
COMMD4-225ENST00000569245 CDK2P24941 298 aa11.88□□□□□ -0.51
COMMD4-225ENST00000569245 IL13RA2Q14627 380 aa11.88□□□□□ -0.51
COMMD4-225ENST00000569245 ZNF846Q147U1 533 aa11.88□□□□□ -0.51
COMMD4-225ENST00000569245 LINC00596Q86U02 117 aa11.88□□□□□ -0.51
COMMD4-225ENST00000569245 OR56B1Q8NGI3 324 aa11.88□□□□□ -0.51
COMMD4-225ENST00000569245 WDR12Q9GZL7 423 aaKnown RBP11.88□□□□□ -0.51
COMMD4-225ENST00000569245 ST3GAL6Q9Y274 331 aa11.88□□□□□ -0.51
COMMD4-225ENST00000569245 A0A0U1RQK1 487 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 A0A1W2PPH5 198 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 A0A1W2PRD5 423 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 A0A1W2PRF3 423 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 A0A1W2PRM7 423 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 M0R1W7 72 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 KNG1P01042 644 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 HKR1P10072 659 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 PRKACAP17612 351 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 COMPP49747 757 aaPredicted RBP11.87□□□□□ -0.51
COMMD4-225ENST00000569245 VEGFCP49767 419 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 DLX1P56177 255 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 RBM11P57052 281 aaKnown RBP11.87□□□□□ -0.51
COMMD4-225ENST00000569245 RPL31P62899 125 aaKnown RBP11.87□□□□□ -0.51
COMMD4-225ENST00000569245 GUCA2AQ02747 115 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 MPV17LQ2QL34 196 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 TMEM69Q5SWH9 247 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 PYHIN1Q6K0P9 492 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 FAM131AQ6UXB0 335 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 Q6YL49 198 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 C1orf122Q6ZSJ8 110 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 Q8N7P7 452 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 ASCC1Q8N9N2 400 aaKnown RBP11.87□□□□□ -0.51
COMMD4-225ENST00000569245 OR10R2Q8NGX6 335 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 C15orf40Q8WUR7 153 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 EMG1Q92979 244 aaKnown RBP11.87□□□□□ -0.51
COMMD4-225ENST00000569245 PHF21AQ96BD5 680 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 NICN1Q9BSH3 213 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 METTL8Q9H825 291 aaKnown RBP11.87□□□□□ -0.51
COMMD4-225ENST00000569245 TENM1Q9UKZ4 2725 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 FBN3Q75N90 2809 aa11.87□□□□□ -0.51
COMMD4-225ENST00000569245 H3BUI4 141 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 GEMIN2O14893 280 aaKnown RBP11.86□□□□□ -0.51
COMMD4-225ENST00000569245 TK1P04183 234 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 CD40LGP29965 261 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 TMEM50BP56557 158 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 TAS2R20P59543 309 aa11.86□□□□□ -0.51
COMMD4-225ENST00000569245 PITPNAQ00169 270 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms