RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 SS18L2Q9UHA2 77 aa2.66□□□□□ -1.98
PVT1-202ENST00000512617 CARHSP1Q9Y2V2 147 aaKnown RBP2.66□□□□□ -1.98
PVT1-202ENST00000512617 RBBP6Q7Z6E9 1792 aaKnown RBP2.66□□□□□ -1.98
PVT1-202ENST00000512617 ZSWIM8A7E2V4 1837 aa2.65□□□□□ -1.98
PVT1-202ENST00000512617 PHIPQ8WWQ0 1821 aa2.65□□□□□ -1.98
PVT1-202ENST00000512617 DOCK2Q92608 1830 aa2.65□□□□□ -1.98
PVT1-202ENST00000512617 MKI67P46013 3256 aaKnown RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 TRAV8-2A0A0B4J237 113 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 IGKV1D-13A0A0B4J2D9 117 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 TEX50A0A1B0GTY4 177 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 A0A1W2PS18 150 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 MAP1LC3B2A6NCE7 125 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 BTNL10A8MVZ5 291 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 AGPAT2O15120 278 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 ORC5O43913 435 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 EIF1BO60739 113 aaKnown RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 ARL6IP5O75915 188 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 C1QL1O75973 258 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 YIF1AO95070 293 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 NXPH4O95158 308 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 PDYNP01213 254 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 IGHA1P01876 353 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 CT45A10P0DMU9 189 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 IGKV1-13P0DP09 117 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 ERGP11308 486 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 SPNP16150 400 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 JUNBP17275 347 aaPredicted RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 CXCL3P19876 107 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 TCN2P20062 427 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 MIPP30301 263 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 SDC4P31431 198 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 CA5AP35218 305 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 SPRP35270 261 aaPredicted RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 DRD3P35462 400 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 EIF1P41567 113 aaKnown RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 VDAC2P45880 294 aaPredicted RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 PSMB2P49721 201 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 MEOX2P50222 304 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 CSRP3P50461 194 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 GP2P55259 537 aaKnown RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 TIMM10P62072 90 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 DEFA6Q01524 100 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 EMX1Q04741 257 aaPredicted RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 LAMTOR4Q0VGL1 99 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 SLC10A1Q14973 349 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 N4BP2L1Q5TBK1 243 aaPredicted RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 RSBN1Q5VWQ0 802 aaPredicted RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 ANKRD22Q5VYY1 191 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 DCUN1D2Q6PH85 259 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 TBPL2Q6SJ96 375 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 DNM1P46Q6ZS02 220 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 SLC16A13Q7RTY0 426 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 C6orf120Q7Z4R8 191 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 CARM1Q86X55 608 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 ZBTB8OSQ8IWT0 167 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 C9orf40Q8IXQ3 194 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 ZNF567Q8N184 647 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 SLC35G3Q8N808 338 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 ST6GALNAC3Q8NDV1 305 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 OR9I1Q8NGQ6 314 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 OR1N2Q8NGR9 330 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 OR2A12Q8NGT7 310 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 OR10D3Q8NH80 312 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 SRSF12Q8WXF0 261 aaKnown RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 DNAJC9Q8WXX5 260 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 CHCHD10Q8WYQ3 142 aaPredicted RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 EXOSC8Q96B26 276 aaKnown RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 BORCS7Q96B45 105 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 FAM3DQ96BQ1 224 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 SEH1LQ96EE3 360 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 L3HYPDHQ96EM0 354 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 MRPL48Q96GC5 212 aaKnown RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 AURKBQ96GD4 344 aaPredicted RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 ACY3Q96HD9 319 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 FAM19A4Q96LR4 140 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 OR52E6Q96RD3 313 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 KIR2DL4Q99706 377 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 VPS25Q9BRG1 176 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 RTBDNQ9BSG5 229 aaPredicted RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 RNF126Q9BV68 326 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 MS4A8Q9BY19 250 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 MAP1LC3BQ9GZQ8 125 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 SLIRPQ9GZT3 109 aaKnown RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 C20orf85Q9H1P6 137 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 ABCG5Q9H222 651 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 ZSCAN16Q9H4T2 348 aaPredicted RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 FAM96AQ9H5X1 160 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 ISG20L2Q9H9L3 353 aaKnown RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 TPT1P8Q9HAU6 139 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 WFDC1Q9HC57 220 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 TAAR2Q9P1P5 351 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 PYCARDQ9ULZ3 195 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.65□□□□□ -1.99
PVT1-202ENST00000512617 FOCADQ5VW36 1801 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 DOCK1Q14185 1865 aa2.65□□□□□ -1.99
PVT1-202ENST00000512617 LOC285556D6RIA3 1793 aa2.64□□□□□ -1.99
PVT1-202ENST00000512617 PTPRFP10586 1907 aa2.64□□□□□ -1.99
PVT1-202ENST00000512617 CENPFP49454 3210 aa2.64□□□□□ -1.99
PVT1-202ENST00000512617 IGHV3OR16-13A0A075B7E8 117 aa2.64□□□□□ -1.99
PVT1-202ENST00000512617 IGLV1-36A0A0B4J1U3 117 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms