RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PIK3IP1Q96FE7 263 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 ELMOD3Q96FG2 381 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 HES4Q9HCC6 221 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 MSL2Q9HCI7 577 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 Q9N2K0 584 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 RAB9BQ9NP90 201 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 KCNIP1Q9NZI2 227 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 COMMD9Q9P000 198 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 IL19Q9UHD0 177 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 FBXO9Q9UK97 447 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-214ENST00000495485 FZR1Q9UM11 496 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 VSIG4Q9Y279 399 aa8.68□□□□□ -1.02
HDAC3-214ENST00000495485 C9orf170A2RU37 121 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 OR2AT4A6NND4 320 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 ABCD4O14678 606 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 OR2A4O95047 310 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 PTBP3O95758 552 aaKnown RBP8.67□□□□□ -1.02
HDAC3-214ENST00000495485 OR2H2O95918 312 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 HAND1O96004 215 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 ZNF728P0DKX0 622 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 IRF2P14316 349 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 ZBTB25P24278 435 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 LMO1P25800 156 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 RBMXP38159 391 aaKnown RBP8.67□□□□□ -1.02
HDAC3-214ENST00000495485 DHODHQ02127 395 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 TLE4Q04727 773 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 DHRS2Q13268 280 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 PDCD1Q15116 288 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 Q6P435 159 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 TRAT1Q6PIZ9 186 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 BRICD5Q6PL45 260 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 ACP7Q6ZNF0 438 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 SLC38A6Q8IZM9 456 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 ZNF565Q8N9K5 539 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 OR5T2Q8NGG2 359 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 OR4A4PQ8NGN8 299 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 MITD1Q8WV92 249 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 TMEM171Q8WVE6 324 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 MAFIPQ8WZ33 124 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 RDH5Q92781 318 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 WFIKKN1Q96NZ8 548 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 OR2A7Q96R45 310 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 HDHD3Q9BSH5 251 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-214ENST00000495485 PDCD10Q9BUL8 212 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 EGLN1Q9GZT9 426 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 WDR13Q9H1Z4 485 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 DLL4Q9NR61 685 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 DECR2Q9NUI1 292 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 C1orf123Q9NWV4 160 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 DNAJB11Q9UBS4 358 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 ITGB1BP2Q9UKP3 347 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 TRAPPC2LQ9UL33 140 aa8.67□□□□□ -1.02
HDAC3-214ENST00000495485 TEX13DA0A0J9YY54 714 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-214ENST00000495485 GOSR2O14653 212 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 SFT2D2O95562 160 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 IFNA2P01563 188 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 CD3EP07766 207 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 HLA-GP17693 338 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 DUSP1P28562 367 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 FCGR2CP31995 323 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 GATA4P43694 442 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 TNFAIP6P98066 277 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-214ENST00000495485 PPP1R1AQ13522 171 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 FAM209AQ5JX71 171 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 C6orf183Q5T699 404 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 SLC35E4Q6ICL7 350 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 WDR82Q6UXN9 313 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 GSG1LQ6UXU4 331 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 Q6ZR03 302 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 NLRC3Q7RTR2 1065 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 WDR86Q86TI4 376 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 BATF2Q8N1L9 274 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 OR52B4Q8NGK2 314 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 OR2T35Q8NGX2 323 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 OR10J5Q8NHC4 309 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 LINC01560Q8TB33 94 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 CAPSLQ8WWF8 208 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 KIRREL1Q96J84 757 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 MEGF10Q96KG7 1140 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 ZNF488Q96MN9 340 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 SLA2Q9H6Q3 261 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 TMEM165Q9HC07 324 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 CA10Q9NS85 328 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 UFSP2Q9NUQ7 469 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 OR14J1Q9UGF5 321 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 FBN2P35556 2912 aa8.66□□□□□ -1.02
HDAC3-214ENST00000495485 TRAV24A0A0B4J272 114 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 TMEM30CPA0ZSE6 113 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 OR5H14A6NHG9 310 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 LRRC30A6NM36 301 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 F8VVB4 439 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 F8VWA3 439 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 SIRPB1O00241 398 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 SLC33A1O00400 549 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-214ENST00000495485 B3GALNT1O75752 331 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 IFNA21P01568 189 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 ADH4P08319 380 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 CXCL3P19876 107 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 SRPXP78539 464 aa8.65□□□□□ -1.02
HDAC3-214ENST00000495485 HLA-DRB3P79483 266 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms