RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 GKN2Q86XP6 184 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 Q8N402 240 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 MS4A15Q8N5U1 240 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 ARIH2OSQ8N7S6 290 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 STEAP2Q8NFT2 490 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR4F15Q8NGB8 312 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR10G3Q8NGC4 313 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR5T3Q8NGG3 340 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR13C2Q8NGS9 318 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 HAVCR2Q8TDQ0 301 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 PATE1Q8WXA2 126 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 PHF3Q92576 2039 aaKnown RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 SGTBQ96EQ0 304 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 OXGR1Q96P68 337 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 CNN2Q99439 309 aaKnown RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 NRIP2Q9BQI9 281 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 PRSS27Q9BQR3 290 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 RSPO3Q9BXY4 272 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 TPK1Q9H3S4 243 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 SLC25A22Q9H936 323 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 UCK1Q9HA47 277 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 ABCB9Q9NP78 766 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 ZNF331Q9NQX6 463 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 BABAM2Q9NXR7 383 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 COMMD3Q9UBI1 195 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 RABL2AQ9UBK7 228 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 ZNF223Q9UK11 482 aaPredicted RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 RABL2BQ9UNT1 228 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 SLC35A3Q9Y2D2 325 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 MRPS7Q9Y2R9 242 aaKnown RBP2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 MMACHCQ9Y4U1 282 aa2.89□□□□□ -1.95
HMGB3P6-201ENST00000444896 SCN3AQ9NY46 2000 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 LAMA3Q16787 3333 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 CHD9Q3L8U1 2897 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 TRANK1O15050 2925 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 LAMA2P24043 3122 aaKnown RBP2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 TRAV27A0A087WT01 109 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 FAM240BA0A1B0GVZ2 78 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 TLCD2A6NGC4 264 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 FAM183AA6NL82 134 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 CENPXA8MT69 81 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 ZNF879B4DU55 563 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 J3QLW9 94 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 J3QRE1 110 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 RTL8CO15255 209 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 ORC5O43913 435 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 HPGDSO60760 199 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 CTNSO60931 367 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 ARL6IP5O75915 188 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 CSTAP01040 98 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 INSP01308 110 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 IGF2P01344 180 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 HLA-DQB1P01920 261 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 IFNA16P05015 189 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 MRPL3P09001 348 aaKnown RBP2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 CSF3P09919 207 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 CT62P0C5K7 136 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 CHTF8P0CG12 524 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 PSG2P11465 335 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 ZNF44P15621 663 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 SPNP16150 400 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 PTNP21246 168 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 LCN1P31025 176 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 EFNB2P52799 333 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 RAB25P57735 213 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 MRPS15P82914 257 aaKnown RBP2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 MRPL28Q13084 256 aaKnown RBP2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 FZD2Q14332 565 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 SF3A2Q15428 464 aaKnown RBP2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 ZNF141Q15928 474 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 MAPK14Q16539 360 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 DEFB110Q30KQ9 67 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 TMEM31Q5JXX7 168 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 HACD4Q5VWC8 232 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 CTRB2Q6GPI1 263 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 Q6P435 159 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 SFXN4Q6P4A7 337 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 CNIH2Q6PI25 160 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 ARL9Q6T311 187 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 PLET1Q6UQ28 207 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 LRRC28Q86X40 367 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 SYS1Q8N2H4 156 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 ZFP41Q8N8Y5 198 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR7G1Q8NGA0 311 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR5W2Q8NH69 310 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 LMX1AQ8TE12 382 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 SRSF12Q8WXF0 261 aaKnown RBP2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 IL22RA2Q969J5 263 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 COQ2Q96H96 371 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 ERMAPQ96PL5 475 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 RNF2Q99496 336 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 TBX5Q99593 518 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 SLC19A3Q9BZV2 496 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 CHRNA10Q9GZZ6 450 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 OR51V1Q9H2C8 321 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 MIXL1Q9H2W2 232 aa2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 TCEAL2Q9H3H9 227 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 RPRD1BQ9NQG5 326 aaKnown RBP2.88□□□□□ -1.95
HMGB3P6-201ENST00000444896 RBFOX1Q9NWB1 397 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms