RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SLC35A1P78382 337 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 PTGES3Q15185 160 aaKnown RBP3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 TMEM176BQ3YBM2 270 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 ACTL10Q5JWF8 245 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 FAM19A1Q7Z5A9 133 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 TMED4Q7Z7H5 227 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 BLIDQ8IZY5 108 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 LGI3Q8N145 548 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 ARIH2OSQ8N7S6 290 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR11H1Q8NG94 326 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR11H2Q8NH07 326 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 GNPDA2Q8TDQ7 276 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 NAT14Q8WUY8 206 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 GHSRQ92847 366 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 PTX4Q96A99 478 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 TM4SF18Q96CE8 201 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 SMARCD1Q96GM5 515 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 SFRP2Q96HF1 295 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR10C1Q96KK4 312 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 BMFQ96LC9 184 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZNF488Q96MN9 340 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 TBX5Q99593 518 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 DOK1Q99704 481 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 SULT4A1Q9BR01 284 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 TCEAL7Q9BRU2 100 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 MND1Q9BWT6 205 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 UGT2B28Q9BY64 529 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 ING2Q9H160 280 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 SLC2A9Q9NRM0 540 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZNF223Q9UK11 482 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 RAB26Q9ULW5 256 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 C14orf166Q9Y224 244 aaKnown RBP3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 MTCH2Q9Y6C9 303 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 SNAPC4Q5SXM2 1469 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 IFT140Q96RY7 1462 aa3.21□□□□□ -1.9
HMGB1P13-201ENST00000406019 RIMS1Q86UR5 1692 aaKnown RBP3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 CD109Q6YHK3 1445 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 CDC42BPBQ9Y5S2 1711 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 TRBV6-6A0A0A6YYG2 114 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 A0A0G2JMP0 313 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 A0A0U1RQV1 116 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 A0A0X1KG70 313 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 PINLYPA6NC86 204 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 PHYHO14832 338 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 RGS5O15539 181 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 CHST10O43529 356 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 GCM2O75603 506 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 UPK1BO75841 260 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 C1QCP02747 245 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZNF806P0C7X5 589 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 IGHV1-8P0DP01 117 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 RPS12P25398 132 aaKnown RBP3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 PAX6P26367 422 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 CA5AP35218 305 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 PCK1P35558 622 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 POLR2IP36954 125 aaKnown RBP3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 RPS9P46781 194 aaKnown RBP3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 GALR1P47211 349 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 TTPAP49638 278 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 PPOXP50336 477 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 TAS2R46P59540 309 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 RPL23P62829 140 aaKnown RBP3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 KRTAP13-3Q3SY46 172 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 SDHAF4Q5VUM1 108 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 MED27Q6P2C8 311 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 CD200R1LQ6Q8B3 271 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 GALNT10Q86SR1 603 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 KRTAP11-1Q8IUC1 163 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 EIF4E3Q8N5X7 224 aaKnown RBP3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZNF433Q8N7K0 673 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 UBAC2Q8NBM4 344 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 LFNGQ8NES3 379 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 SLC26A10Q8NG04 563 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 OR5L1Q8NGL2 311 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZFAND1Q8TCF1 268 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 C15orf40Q8WUR7 153 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 RXFP2Q8WXD0 754 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 ACOT12Q8WYK0 555 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZNF799Q96GE5 643 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 AIF1LQ9BQI0 150 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 C20orf144Q9BQM9 153 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 VPS25Q9BRG1 176 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 MED18Q9BUE0 208 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 CHST5Q9GZS9 411 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 CCDC90BQ9GZT6 254 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 MIXL1Q9H2W2 232 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 TPT1P8Q9HAU6 139 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 SLC35A3Q9Y2D2 325 aa3.2□□□□□ -1.9
HMGB1P13-201ENST00000406019 ARHGAP31Q2M1Z3 1444 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 VPS8Q8N3P4 1428 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 IGKV1-27A0A075B6S5 117 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 WI2-2373I1.2A0A1W2PRP0 233 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 C11orf94C9JXX5 98 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 TSTD3H0UI37 97 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 M0R1B8 84 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 TNFRSF11BO00300 401 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 ZNF593O00488 134 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 CDIPTO14735 213 aa3.19□□□□□ -1.9
HMGB1P13-201ENST00000406019 TAAR5O14804 337 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms