RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 NDFIP1Q9BT67 221 aa13.95□□□□□ -0.18
COL17A1-202ENST00000369733 LMX1BO60663 402 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 HOXA6P31267 233 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 SLC36A1Q7Z2H8 476 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 LOXL2Q9Y4K0 774 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 TGIF2-C20orf24A0A0A6YYL0 155 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 CTXND1A0A1B0GTU2 59 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 C4orf51C9J302 202 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 DXOO77932 396 aaKnown RBP13.94□□□□□ -0.18
COL17A1-202ENST00000369733 HSPB1P04792 205 aaKnown RBP13.94□□□□□ -0.18
COL17A1-202ENST00000369733 SRFP11831 508 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 CHRNB4P30926 498 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 C9orf40Q8IXQ3 194 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 SHANK3Q9BYB0 1731 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 UBR3Q6ZT12 1888 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 A0A0G2JK05 382 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 SPINK2P20155 84 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 MFRPQ9BY79 579 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 AURKAIP1Q9NWT8 199 aaPredicted RBP13.94□□□□□ -0.18
COL17A1-202ENST00000369733 PSG2P11465 335 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 OR1K1Q8NGR3 316 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 TM4SF19Q96DZ7 209 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 RPL36A-HNRNPH2H7BZ11 118 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 CDX1P47902 265 aaPredicted RBP13.94□□□□□ -0.18
COL17A1-202ENST00000369733 LGALS4P56470 323 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 SPCS3P61009 180 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 NHLH1Q02575 133 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 OR5D13Q8NGL4 314 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 OR2W1Q9Y3N9 320 aa13.94□□□□□ -0.18
COL17A1-202ENST00000369733 K7EQS6 105 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 FOXS1O43638 330 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 MPC1Q9Y5U8 109 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 SCN3AQ9NY46 2000 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 H0YL77 283 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 COX19Q49B96 90 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 ATRAIDQ6UW56 229 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 TMEM252Q8N6L7 170 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 RARRES2Q99969 163 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 PHF7Q9BWX1 381 aaPredicted RBP13.93□□□□□ -0.18
COL17A1-202ENST00000369733 WDR61Q9GZS3 305 aaKnown RBP13.93□□□□□ -0.18
COL17A1-202ENST00000369733 C5orf66Q9H5L9 145 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 C2CD4DB7Z1M9 353 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 CD74P04233 296 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 ISG15P05161 165 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 C11orf42Q8N5U0 333 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 MYO16Q9Y6X6 1858 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 SPINT1O43278 529 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 IER3P46695 156 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 TRAT1Q6PIZ9 186 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 CARFQ8N187 725 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 TMEM167BQ9NRX6 74 aa13.93□□□□□ -0.18
COL17A1-202ENST00000369733 IL11P20809 199 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 OPRK1P41145 380 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 RAC3P60763 192 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 LYG1Q8N1E2 194 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 OR2Z1Q8NG97 314 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 BCL2L2Q92843 193 aaPredicted RBP13.92□□□□□ -0.18
COL17A1-202ENST00000369733 SBF2Q86WG5 1849 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 SRD5A2P31213 254 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 PMELP40967 661 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 KIR2DS2P43631 304 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 GNG10P50151 68 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 R3HDM4Q96D70 268 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 METTL1Q9UBP6 276 aaKnown RBP13.92□□□□□ -0.18
COL17A1-202ENST00000369733 A0A1B0GTQ1 180 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 GREM1O60565 184 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 PGA4P0DJD7 388 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 PGA5P0DJD9 388 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 ZP4Q12836 540 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 GUSBP11Q6P575 273 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 TMEM56Q96MV1 263 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 GGACTQ9BVM4 153 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 PIPOXQ9P0Z9 390 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 SNURFLB1AK76 121 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 BMPR1BO00238 502 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 ST8SIA5O15466 376 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 TCF21O43680 179 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 GCGP01275 180 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 HTR1DP28221 377 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 RBPJQ06330 500 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 ZNF721Q8TF20 911 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 RAB24Q969Q5 203 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 RASL10BQ96S79 203 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 GPR61Q9BZJ8 451 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 CKAP5Q14008 2032 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 STRCP1A6NGW2 1772 aa13.92□□□□□ -0.18
COL17A1-202ENST00000369733 RNPS1Q15287 305 aaKnown RBP13.91□□□□□ -0.18
COL17A1-202ENST00000369733 ZADH2Q8N4Q0 377 aa13.91□□□□□ -0.18
COL17A1-202ENST00000369733 OR1P1Q8NH06 330 aa13.91□□□□□ -0.18
COL17A1-202ENST00000369733 SARAFQ96BY9 339 aa13.91□□□□□ -0.18
COL17A1-202ENST00000369733 ZNF552Q9H707 407 aaPredicted RBP13.91□□□□□ -0.18
COL17A1-202ENST00000369733 DOK5Q9P104 306 aa13.91□□□□□ -0.18
COL17A1-202ENST00000369733 CARHSP1Q9Y2V2 147 aaKnown RBP13.91□□□□□ -0.18
COL17A1-202ENST00000369733 KCNMB2Q9Y691 235 aa13.91□□□□□ -0.18
COL17A1-202ENST00000369733 IGLV1-36A0A0B4J1U3 117 aa13.91□□□□□ -0.18
COL17A1-202ENST00000369733 DNASE2O00115 360 aaPredicted RBP13.91□□□□□ -0.18
COL17A1-202ENST00000369733 OR5AL1P0C617 328 aa13.91□□□□□ -0.18
COL17A1-202ENST00000369733 BTCP35070 178 aa13.91□□□□□ -0.18
COL17A1-202ENST00000369733 RHBDD2Q6NTF9 364 aa13.91□□□□□ -0.18
COL17A1-202ENST00000369733 PRSS3P2Q8NHM4 247 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms