RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 POU2F2P09086 479 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 TMEM50BP56557 158 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 RIGQ13278 110 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 H1FOOQ8IZA3 346 aaPredicted RBP13.03□□□□□ -0.32
CHD4-201ENST00000357008 MRGPRFQ96AM1 343 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 GOSR1O95249 250 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 COL9A1P20849 921 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 FDX2Q6P4F2 183 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 EIF4E3Q8N5X7 224 aaKnown RBP13.03□□□□□ -0.32
CHD4-201ENST00000357008 ZNF552Q9H707 407 aaPredicted RBP13.03□□□□□ -0.32
CHD4-201ENST00000357008 CXorf1O96002 111 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 GAPDHP04406 335 aaKnown RBP13.03□□□□□ -0.32
CHD4-201ENST00000357008 CELA2BP08218 269 aaPredicted RBP13.03□□□□□ -0.32
CHD4-201ENST00000357008 GZMHP20718 246 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 TMEM255AQ5JRV8 349 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 MRPL54Q6P161 138 aaKnown RBP13.03□□□□□ -0.32
CHD4-201ENST00000357008 SSMEM1Q8WWF3 244 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 SNURFLB1AK76 121 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 C3orf80F5H4A9 247 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 K7ESF4 209 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 ACAA2P42765 397 aaKnown RBP13.03□□□□□ -0.32
CHD4-201ENST00000357008 FAM3BP58499 235 aaPredicted RBP13.03□□□□□ -0.32
CHD4-201ENST00000357008 MGAT2Q10469 447 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 GFRALQ6UXV0 394 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 D2HGDHQ8N465 521 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 OR4A4PQ8NGN8 299 aa13.03□□□□□ -0.32
CHD4-201ENST00000357008 ADAT3Q96EY9 351 aaPredicted RBP13.03□□□□□ -0.32
CHD4-201ENST00000357008 SCN1AP35498 2009 aa13.02□□□□□ -0.32
CHD4-201ENST00000357008 NANOS3P60323 173 aaKnown RBP13.02□□□□□ -0.32
CHD4-201ENST00000357008 HFEQ30201 348 aa13.02□□□□□ -0.32
CHD4-201ENST00000357008 DCAF12L2Q5VW00 463 aa13.02□□□□□ -0.32
CHD4-201ENST00000357008 A6NDN8 102 aa13.02□□□□□ -0.32
CHD4-201ENST00000357008 SRSF10O75494 262 aaKnown RBP13.02□□□□□ -0.32
CHD4-201ENST00000357008 CD99P14209 185 aa13.02□□□□□ -0.32
CHD4-201ENST00000357008 MUC1P15941 1255 aaPredicted RBP13.02□□□□□ -0.32
CHD4-201ENST00000357008 NXPH1P58417 271 aa13.02□□□□□ -0.32
CHD4-201ENST00000357008 GRAMD2BQ96HH9 432 aa13.02□□□□□ -0.32
CHD4-201ENST00000357008 RPL36A-HNRNPH2H7BZ11 118 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 ZNF207O43670 478 aaKnown RBP13.02□□□□□ -0.33
CHD4-201ENST00000357008 IER3P46695 156 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 FAM219AQ8IW50 185 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 SMCHD1A6NHR9 2005 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 ARAP2Q8WZ64 1704 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 SH2D7A6NKC9 451 aaPredicted RBP13.02□□□□□ -0.33
CHD4-201ENST00000357008 J3QT63 122 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 VAX1Q5SQQ9 334 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 RPP25Q9BUL9 199 aaKnown RBP13.02□□□□□ -0.33
CHD4-201ENST00000357008 SMPD2O60906 423 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 HLA-DQB1P01920 261 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 RCC1P18754 421 aaPredicted RBP13.02□□□□□ -0.33
CHD4-201ENST00000357008 COL8A1P27658 744 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 GUCA2BQ16661 112 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 OR1L1Q8NH94 360 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 FBLIM1Q8WUP2 373 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 SCN9AQ15858 1988 aa13.02□□□□□ -0.33
CHD4-201ENST00000357008 DOCK2Q92608 1830 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 ZNF205O95201 554 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 F12P00748 615 aaPredicted RBP13.01□□□□□ -0.33
CHD4-201ENST00000357008 IGHV3-13P01766 116 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 IGHV3-7P01780 117 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 CEACAM3P40198 252 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 HYAL1Q12794 435 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 TMEM108Q6UXF1 575 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 CCL17Q92583 94 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 OR2H1Q9GZK4 316 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 A0A1W2PPC1 479 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 MS4A18H0YCH9 400 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 HRKO00198 91 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 MS4A18Q3C1V0 323 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 ABLIM2Q6H8Q1 611 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 LINC00596Q86U02 117 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 ABHD14AQ9BUJ0 271 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 SLC26A1Q9H2B4 701 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 HSPB8Q9UJY1 196 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 PAM16Q9Y3D7 125 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 MRPS18BQ9Y676 258 aaKnown RBP13.01□□□□□ -0.33
CHD4-201ENST00000357008 SERF2P84101 59 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 PIGYQ3MUY2 71 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 ZNF660Q6AZW8 331 aaPredicted RBP13.01□□□□□ -0.33
CHD4-201ENST00000357008 PRNDQ9UKY0 176 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 ZNF716A6NP11 495 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 ISLRO14498 428 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 OR52L2PQ8NGH6 319 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 OR5A2Q8NGI9 324 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 GLRX2Q9NS18 164 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 CLEC1BQ9P126 229 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 CORTO00230 105 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 BCL2P10415 239 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 RPL7P18124 248 aaKnown RBP13.01□□□□□ -0.33
CHD4-201ENST00000357008 KIR3DL2P43630 455 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 TNXAQ16473 311 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 HSF4Q9ULV5 492 aa13.01□□□□□ -0.33
CHD4-201ENST00000357008 APCSP02743 223 aa13□□□□□ -0.33
CHD4-201ENST00000357008 STAG3L2P0CL84 134 aa13□□□□□ -0.33
CHD4-201ENST00000357008 G6PCP35575 357 aa13□□□□□ -0.33
CHD4-201ENST00000357008 ZNF343Q6P1L6 599 aa13□□□□□ -0.33
CHD4-201ENST00000357008 STXBP6Q8NFX7 210 aa13□□□□□ -0.33
CHD4-201ENST00000357008 PERPQ96FX8 193 aa13□□□□□ -0.33
CHD4-201ENST00000357008 IL17BQ9UHF5 180 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms