RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 RSG1Q9BU20 258 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 SLC25A31Q9H0C2 315 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 A0A1B0GW64 132 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 F10P00742 488 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 FABP4P15090 132 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 OR2T2Q6IF00 324 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 CLDND2Q8NHS1 167 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 OPA3Q9H6K4 179 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 VSIRQ9H7M9 311 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 TMEM38BQ9NVV0 291 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 FREM1Q5H8C1 2179 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 A0A0G2JRQ6 117 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 CXCL13O43927 109 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 VAMP5O95183 116 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 IGFBP4P22692 258 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 FUT6P51993 359 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 HERPUD1Q15011 391 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 ASCL4Q6XD76 172 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 OR51H1Q8NH63 302 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 SIGLEC12Q96PQ1 595 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 WNT5BQ9H1J7 359 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 hCG_38984A0A1B0GV85 526 aa15.43■□□□□ 0.06
TRAF4-201ENST00000262395 TK1P04183 234 aa15.43■□□□□ 0.06
TRAF4-201ENST00000262395 NKX6-1P78426 367 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-201ENST00000262395 GPR137CQ8N3F9 429 aa15.43■□□□□ 0.06
TRAF4-201ENST00000262395 FRZBQ92765 325 aa15.43■□□□□ 0.06
TRAF4-201ENST00000262395 UNKLQ9H9P5 680 aaKnown RBP15.43■□□□□ 0.06
TRAF4-201ENST00000262395 PTRH2Q9Y3E5 179 aaKnown RBP15.43■□□□□ 0.06
TRAF4-201ENST00000262395 URB1O60287 2271 aaKnown RBP15.43■□□□□ 0.06
TRAF4-201ENST00000262395 ARHGAP21Q5T5U3 1957 aa15.43■□□□□ 0.06
TRAF4-201ENST00000262395 CEP192Q8TEP8 1941 aa15.43■□□□□ 0.06
TRAF4-201ENST00000262395 SLC22A20A6NK97 555 aa15.43■□□□□ 0.06
TRAF4-201ENST00000262395 EDN3P14138 238 aa15.43■□□□□ 0.06
TRAF4-201ENST00000262395 DSCR4P56555 118 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-201ENST00000262395 SSX2Q16385 188 aa15.43■□□□□ 0.06
TRAF4-201ENST00000262395 KHDC3LQ587J8 217 aa15.43■□□□□ 0.06
TRAF4-201ENST00000262395 TMEM211Q6ICI0 200 aa15.43■□□□□ 0.06
TRAF4-201ENST00000262395 AAED1Q7RTV5 226 aa15.43■□□□□ 0.06
TRAF4-201ENST00000262395 SSX3Q99909 188 aa15.43■□□□□ 0.06
TRAF4-201ENST00000262395 PI4KAP42356 2102 aa15.43■□□□□ 0.06
TRAF4-201ENST00000262395 TRGC1P0CF51 173 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 CCDC54Q8NEL0 328 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 PLPPR1Q8TBJ4 325 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 ABHD5Q8WTS1 349 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 ZNF665Q9H7R5 613 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 CACNA1EQ15878 2313 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 PPP1R2P9O14990 202 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 GPM6AP51674 278 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 GAMTQ14353 236 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 TMEM42Q69YG0 159 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 ZNF880Q6PDB4 577 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 TMEM56Q96MV1 263 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 DOCK7Q96N67 2140 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 FOXB1Q99853 325 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 OR2H1Q9GZK4 316 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 TMEM56-RWDD3S4R434 201 aa15.42■□□□□ 0.06
TRAF4-201ENST00000262395 CD200P41217 278 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 GLIPR1P48060 266 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 PAX9P55771 341 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 ZNF506Q5JVG8 444 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 UBALD1Q8TB05 177 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 CA5BP1Q8WTZ4 195 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 SPIN2AQ99865 258 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 SPIN2BQ9BPZ2 258 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 PRDM13Q9H4Q3 707 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 WDFY4Q6ZS81 3184 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 CHD3Q12873 2000 aaKnown RBP15.41■□□□□ 0.06
TRAF4-201ENST00000262395 TRAV39A0A0B4J263 110 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 OR6C6A6NF89 314 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 IAPPP10997 89 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 SRFP11831 508 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 CARD18P57730 90 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 HLA-DRB3P79483 266 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 IGFBP7Q16270 282 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 ZNF488Q96MN9 340 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 TAAR3PQ9P1P4 343 aa15.41■□□□□ 0.06
TRAF4-201ENST00000262395 IGKV1-6A0A0C4DH72 117 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 HSPB1P04792 205 aaKnown RBP15.4■□□□□ 0.06
TRAF4-201ENST00000262395 CST2P09228 141 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 MMP9P14780 707 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 FKBP2P26885 142 aaKnown RBP15.4■□□□□ 0.06
TRAF4-201ENST00000262395 EXT1Q16394 746 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 NMSQ5H8A3 153 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 A0A096LPE4 126 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 ZNF816-ZNF321PA0A0X1KG74 233 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 A0A1W2PPZ6 126 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 ZNF732B4DXR9 585 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 RPL36A-HNRNPH2H7BZ11 118 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 TRAPPC6AO75865 159 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 TLE4Q04727 773 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 CYB5R2Q6BCY4 276 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 WDR5BQ86VZ2 330 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 HIST3H2BBQ8N257 126 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 CPEB3Q8NE35 698 aaKnown RBP15.4■□□□□ 0.06
TRAF4-201ENST00000262395 RNASE11Q8TAA1 199 aaKnown RBP15.4■□□□□ 0.06
TRAF4-201ENST00000262395 GNPNAT1Q96EK6 184 aaPredicted RBP15.4■□□□□ 0.06
TRAF4-201ENST00000262395 FAM210BQ96KR6 192 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 A0A087WZY1 265 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 RFPL3SP0C7P2 107 aa15.4■□□□□ 0.06
TRAF4-201ENST00000262395 PGA5P0DJD9 388 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms