RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 A0A1W2PPK0 400 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 MGST3O14880 152 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 DEGS1O15121 323 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 CSTBP04080 98 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 ZNF44P15621 663 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 PSMA1P25786 263 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 EDDM3BP56851 147 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 MEF2CQ06413 473 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 MLLT11Q13015 90 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 TPBGQ13641 420 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 GPR176Q14439 515 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 GRK1Q15835 563 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 LY6EQ16553 131 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 TMEM200BQ69YZ2 307 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 UNQ9370/PRO34162Q6UXP9 181 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 REC114Q7Z4M0 266 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 C11orf42Q8N5U0 333 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 OR4M1Q8NGD0 313 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 ORAI1Q96D31 301 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 NPFFR1Q9GZQ6 430 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 HEXA-AS1Q9H8Q6 139 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 IL36RNQ9UBH0 155 aa14.21□□□□□ -0.13
SHKBP1-203ENST00000594298 TET2Q6N021 2002 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 TRAV8-7A0A075B6U6 113 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 hADV38S2A0JD32 116 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 TMEM82A0PJX8 343 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 SIRPB1O00241 398 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 HTR3BO95264 441 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 OR2H2O95918 312 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 MAS1P04201 325 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 LMO1P25800 156 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 ERP29P30040 261 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 OR3A4PP47883 348 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 SCN1BQ07699 218 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 IL13RA2Q14627 380 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 TBCEQ15813 527 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 LIPKQ5VXJ0 399 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 ZNF367Q7RTV3 350 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 SVOPQ8N4V2 548 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 JAGN1Q8N5M9 183 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 NKAIN3Q8N8D7 197 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 Q8NFD4 153 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 OR51T1Q8NGJ9 327 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 PIFOQ8TCI5 191 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 PHYHIPQ92561 330 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 MGLLQ99685 303 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 IL36GQ9NZH8 169 aa14.2□□□□□ -0.14
SHKBP1-203ENST00000594298 VGLL3A8MV65 326 aa14.19□□□□□ -0.14
SHKBP1-203ENST00000594298 PIN1P1O15428 100 aa14.19□□□□□ -0.14
SHKBP1-203ENST00000594298 CPEP16870 476 aa14.19□□□□□ -0.14
SHKBP1-203ENST00000594298 MAP2K4P45985 399 aa14.19□□□□□ -0.14
SHKBP1-203ENST00000594298 Q6ZPA2 131 aa14.19□□□□□ -0.14
SHKBP1-203ENST00000594298 CEACAM19Q7Z692 300 aa14.19□□□□□ -0.14
SHKBP1-203ENST00000594298 C11orf44Q8N8P7 122 aa14.19□□□□□ -0.14
SHKBP1-203ENST00000594298 FOXRED1Q96CU9 486 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-203ENST00000594298 NR1H4Q96RI1 486 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-203ENST00000594298 FAM90A8PA6NJQ4 464 aa14.18□□□□□ -0.14
SHKBP1-203ENST00000594298 CHST1O43916 411 aa14.18□□□□□ -0.14
SHKBP1-203ENST00000594298 PSPNO60542 156 aa14.18□□□□□ -0.14
SHKBP1-203ENST00000594298 CDRT1O95170 752 aa14.18□□□□□ -0.14
SHKBP1-203ENST00000594298 EDDM3AQ14507 147 aa14.18□□□□□ -0.14
SHKBP1-203ENST00000594298 HSD17B12Q53GQ0 312 aa14.18□□□□□ -0.14
SHKBP1-203ENST00000594298 Q6P435 159 aa14.18□□□□□ -0.14
SHKBP1-203ENST00000594298 Q8N2B8 174 aa14.18□□□□□ -0.14
SHKBP1-203ENST00000594298 OSR2Q8N2R0 312 aa14.18□□□□□ -0.14
SHKBP1-203ENST00000594298 OR4S1Q8NGB4 309 aa14.18□□□□□ -0.14
SHKBP1-203ENST00000594298 UQCC2Q9BRT2 126 aa14.18□□□□□ -0.14
SHKBP1-203ENST00000594298 CHST6Q9GZX3 395 aa14.18□□□□□ -0.14
SHKBP1-203ENST00000594298 LRRC42Q9Y546 428 aa14.18□□□□□ -0.14
SHKBP1-203ENST00000594298 ARL6IP5O75915 188 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 RBP4P02753 201 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 CSN2P05814 226 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 ZNF728P0DKX0 622 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 VSIG10L2P0DP72 767 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 GTF2F2P13984 249 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 SRMP19623 302 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 PAX6P26367 422 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 OR3A1P47881 315 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 P2RX3P56373 397 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 LGALS4P56470 323 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 ERVFRD-1P60508 538 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 FAM189A2Q15884 450 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 NHLRC3Q5JS37 347 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 GLT8D1Q68CQ7 371 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 HIST2H2BDQ6DRA6 164 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 LINC00596Q86U02 117 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 OR10K1Q8NGX5 313 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 TMEM203Q969S6 136 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 MRPS24Q96EL2 167 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 ZNF702PQ9H963 129 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 ACOT13Q9NPJ3 140 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 GHRLQ9UBU3 117 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 ST3GAL6Q9Y274 331 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 MRPS28Q9Y2Q9 187 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 LINC00312Q9Y6C7 94 aa14.17□□□□□ -0.14
SHKBP1-203ENST00000594298 C17orf98A8MV24 154 aa14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 SLC33A1O00400 549 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 RRP9O43818 475 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 SC5DO75845 299 aa14.16□□□□□ -0.14
SHKBP1-203ENST00000594298 UCHL1P09936 223 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms