RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 FBXO9Q9UK97 447 aaPredicted RBP17.44■□□□□ 0.38
PNKP-203ENST00000593946 LRRK2Q5S007 2527 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 IGHV3OR15-7A0A075B7D8 119 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 LRRC30A6NM36 301 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 TFF1P04155 84 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 CD80P33681 288 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 COL10A1Q03692 680 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 KIAA2026Q5HYC2 2103 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 FAM201AQ5SY85 155 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 AGAP6Q5VW22 663 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 ZNF497Q6ZNH5 498 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 IDO2Q6ZQW0 420 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 OVCH2Q7RTZ1 564 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 DTX2Q86UW9 622 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 ARRDC1Q8N5I2 433 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 PLPPR1Q8TBJ4 325 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 Q9N2K0 584 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 METRNQ9UJH8 293 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 ZNF222Q9UK12 451 aa17.43■□□□□ 0.38
PNKP-203ENST00000593946 POM121CA8CG34 1229 aa17.42■□□□□ 0.38
PNKP-203ENST00000593946 CD8AP01732 235 aa17.42■□□□□ 0.38
PNKP-203ENST00000593946 IFNA6P05013 189 aa17.42■□□□□ 0.38
PNKP-203ENST00000593946 H2AFB2P0C5Z0 115 aa17.42■□□□□ 0.38
PNKP-203ENST00000593946 DANCRP0C864 163 aa17.42■□□□□ 0.38
PNKP-203ENST00000593946 OR3A3P47888 321 aa17.42■□□□□ 0.38
PNKP-203ENST00000593946 TATDN3Q17R31 274 aa17.42■□□□□ 0.38
PNKP-203ENST00000593946 ZNF880Q6PDB4 577 aa17.42■□□□□ 0.38
PNKP-203ENST00000593946 C20orf204Q6ZNR8 217 aa17.42■□□□□ 0.38
PNKP-203ENST00000593946 C17orf107Q6ZR85 190 aa17.42■□□□□ 0.38
PNKP-203ENST00000593946 ANGPTL6Q8NI99 470 aa17.42■□□□□ 0.38
PNKP-203ENST00000593946 GINS4Q9BRT9 223 aa17.42■□□□□ 0.38
PNKP-203ENST00000593946 FLVCR2Q9UPI3 526 aa17.42■□□□□ 0.38
PNKP-203ENST00000593946 TMEM82A0PJX8 343 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 GOSR1O95249 250 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 HPXP02790 462 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 SOD3P08294 240 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 OR3A1P47881 315 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 KCNJ3P48549 501 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 RAB25P57735 213 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 ARPC4P59998 168 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 ATXN7L3Q14CW9 347 aaPredicted RBP17.41■□□□□ 0.38
PNKP-203ENST00000593946 CDK10Q15131 360 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 SCGB2B2Q4G0G5 96 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 TEX36Q5VZQ5 186 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 OR13C8Q8NGS7 320 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 SLC25A21Q9BQT8 299 aaPredicted RBP17.41■□□□□ 0.38
PNKP-203ENST00000593946 EHFQ9NZC4 300 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 DSCAML1Q8TD84 2053 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 TMEM178BH3BS89 294 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 H7C1Q1 480 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 ZNF737O75373 536 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 MUC1P15941 1255 aaPredicted RBP17.41■□□□□ 0.38
PNKP-203ENST00000593946 STUMQ69YW2 141 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 C1orf87Q8N0U7 546 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 MRGPRFQ96AM1 343 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 VRK1Q99986 396 aaPredicted RBP17.41■□□□□ 0.38
PNKP-203ENST00000593946 TMEM106BQ9NUM4 274 aa17.41■□□□□ 0.38
PNKP-203ENST00000593946 OOEPA6NGQ2 149 aa17.4■□□□□ 0.38
PNKP-203ENST00000593946 SDCBPO00560 298 aaPredicted RBP17.4■□□□□ 0.38
PNKP-203ENST00000593946 ARPC1BO15143 372 aaKnown RBP17.4■□□□□ 0.38
PNKP-203ENST00000593946 PEX14O75381 377 aa17.4■□□□□ 0.38
PNKP-203ENST00000593946 ASCC1Q8N9N2 400 aaKnown RBP17.4■□□□□ 0.38
PNKP-203ENST00000593946 SHARPINQ9H0F6 387 aa17.4■□□□□ 0.38
PNKP-203ENST00000593946 NECAP2Q9NVZ3 263 aa17.4■□□□□ 0.38
PNKP-203ENST00000593946 RALYQ9UKM9 306 aaKnown RBP17.4■□□□□ 0.38
PNKP-203ENST00000593946 IGHV1-69-2A0A0G2JMI3 117 aa17.39■□□□□ 0.37
PNKP-203ENST00000593946 ZNF205O95201 554 aa17.39■□□□□ 0.37
PNKP-203ENST00000593946 DHFRP00374 187 aa17.39■□□□□ 0.37
PNKP-203ENST00000593946 MECP2P51608 486 aaKnown RBP17.39■□□□□ 0.37
PNKP-203ENST00000593946 PAX5Q02548 391 aa17.39■□□□□ 0.37
PNKP-203ENST00000593946 GRK1Q15835 563 aa17.39■□□□□ 0.37
PNKP-203ENST00000593946 CCL17Q92583 94 aa17.39■□□□□ 0.37
PNKP-203ENST00000593946 SPOCK3Q9BQ16 436 aa17.39■□□□□ 0.37
PNKP-203ENST00000593946 TRAF4Q9BUZ4 470 aaPredicted RBP17.39■□□□□ 0.37
PNKP-203ENST00000593946 KIR2DS1A0A191URI9 304 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 GSTT2P0CG29 244 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 KIR2DS4P43632 304 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 GABRA2P47869 451 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 TSPAN5P62079 268 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 KIR2DS1Q14954 304 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 SLC35E4Q6ICL7 350 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 MOB1BQ7L9L4 216 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 LHFPL1Q86WI0 220 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 TMEM17Q86X19 198 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 TERB2Q8NHR7 220 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 COQ2Q96H96 371 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 ALG5Q9Y673 324 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 UTP20O75691 2785 aaKnown RBP17.38■□□□□ 0.37
PNKP-203ENST00000593946 OR5H8P0DN80 308 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 RCC1P18754 421 aaPredicted RBP17.38■□□□□ 0.37
PNKP-203ENST00000593946 ZNF660Q6AZW8 331 aaPredicted RBP17.38■□□□□ 0.37
PNKP-203ENST00000593946 SDSLQ96GA7 329 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 SNX22Q96L94 193 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 MBNL3Q9NUK0 354 aaKnown RBP17.38■□□□□ 0.37
PNKP-203ENST00000593946 ING3Q9NXR8 418 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 MAB21L2Q9Y586 359 aa17.38■□□□□ 0.37
PNKP-203ENST00000593946 TMEM30CPA0ZSE6 113 aa17.37■□□□□ 0.37
PNKP-203ENST00000593946 TRDCB7Z8K6 153 aa17.37■□□□□ 0.37
PNKP-203ENST00000593946 LGALS8O00214 317 aa17.37■□□□□ 0.37
PNKP-203ENST00000593946 ZNF561Q8N587 486 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms