RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 OCM2P0CE71 109 aa9.48□□□□□ -0.89
PRPF8-208ENST00000573716 OCMP0CE72 109 aaPredicted RBP9.48□□□□□ -0.89
PRPF8-208ENST00000573716 CDK5Q00535 292 aa9.48□□□□□ -0.89
PRPF8-208ENST00000573716 FAM98BQ52LJ0 330 aaKnown RBP9.48□□□□□ -0.89
PRPF8-208ENST00000573716 TMEM65Q6PI78 240 aa9.48□□□□□ -0.89
PRPF8-208ENST00000573716 DEFB107AQ8IZN7 70 aa9.48□□□□□ -0.89
PRPF8-208ENST00000573716 RFESDQ8TAC1 157 aa9.48□□□□□ -0.89
PRPF8-208ENST00000573716 MAGIXQ9H6Y5 334 aa9.48□□□□□ -0.89
PRPF8-208ENST00000573716 ZNF556Q9HAH1 456 aa9.48□□□□□ -0.89
PRPF8-208ENST00000573716 GNB4Q9HAV0 340 aa9.48□□□□□ -0.89
PRPF8-208ENST00000573716 CALYQ9NYX4 217 aa9.48□□□□□ -0.89
PRPF8-208ENST00000573716 IDI2-AS1Q9NZ38 188 aa9.48□□□□□ -0.89
PRPF8-208ENST00000573716 MRM2Q9UI43 246 aaKnown RBP9.48□□□□□ -0.89
PRPF8-208ENST00000573716 MEIKINA0A087WXM9 373 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 GNGT2O14610 69 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 HSD17B6O14756 317 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 DEGS1O15121 323 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 MPZL2O60487 215 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 OSMP13725 252 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 CCL1P22362 96 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 GNB1P62873 340 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 ASPHD1Q5U4P2 390 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 Q6ZSR3 168 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 CATSPERDQ86XM0 798 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 Q8N9W7 124 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 OR5D18Q8NGL1 313 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 OR6Q1Q8NGQ2 317 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 OR13A1Q8NGR1 328 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 OR2T10Q8NGZ9 312 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 KCTD7Q96MP8 289 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 TBX5Q99593 518 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 HSPB9Q9BQS6 159 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 KRT84Q9NSB2 600 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 ACTR3BQ9P1U1 418 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 KIF25Q9UIL4 384 aa9.47□□□□□ -0.89
PRPF8-208ENST00000573716 IGHV1-3A0A0C4DH29 117 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 TCRBV5S2A0A599 114 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 SLC33A1O00400 549 aaPredicted RBP9.46□□□□□ -0.9
PRPF8-208ENST00000573716 CST1P01037 141 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 GAPDHP04406 335 aaKnown RBP9.46□□□□□ -0.9
PRPF8-208ENST00000573716 KRT8P05787 483 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 IGHV4-30-4P0DP06 118 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 PSMB8P28062 276 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 VEGFCP49767 419 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 CFHR3Q02985 330 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 PDZK1IP1Q13113 114 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 LHFPL2Q6ZUX7 228 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 BCDIN3DQ7Z5W3 292 aaKnown RBP9.46□□□□□ -0.9
PRPF8-208ENST00000573716 TMEM179BQ7Z7N9 219 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 ZNF565Q8N9K5 539 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 SPACA5Q96QH8 159 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 S1PR3Q99500 378 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 ELAC2Q9BQ52 826 aaKnown RBP9.46□□□□□ -0.9
PRPF8-208ENST00000573716 KLK15Q9H2R5 256 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 VSIG4Q9Y279 399 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 WSB1Q9Y6I7 421 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 STARD9Q9P2P6 4700 aa9.46□□□□□ -0.9
PRPF8-208ENST00000573716 TRAV39A0A0B4J263 110 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 IGKV1-12A0A0C4DH73 117 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 LOC107986453A0A1B0GWG9 222 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 M0R129 80 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 IL1AP01583 271 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 IGKV1D-12P01611 117 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 CSN2P05814 226 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 ZNF20P17024 532 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 ATF1P18846 271 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 PRKACBP22694 351 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 C21orf33P30042 268 aaPredicted RBP9.45□□□□□ -0.9
PRPF8-208ENST00000573716 SOX6P35712 828 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 SLURP1P55000 103 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 ZP1P60852 638 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 ISL1P61371 349 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 PAN3Q58A45 887 aaKnown RBP9.45□□□□□ -0.9
PRPF8-208ENST00000573716 Q6P435 159 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 HAPLN4Q86UW8 402 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 DHFR2Q86XF0 187 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 IZUMO1Q8IYV9 350 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 HS3ST5Q8IZT8 346 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 RDH10Q8IZV5 341 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 ZNF491Q8N8L2 437 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 CHST4Q8NCG5 386 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 DNAAF1Q8NEP3 725 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 MRGPRDQ8TDS7 321 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 PP6455Q8WZ26 134 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 ARPC1AQ92747 370 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 DLX4Q92988 240 aaPredicted RBP9.45□□□□□ -0.9
PRPF8-208ENST00000573716 ST6GALNAC6Q969X2 333 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 RBMXL1Q96E39 390 aaKnown RBP9.45□□□□□ -0.9
PRPF8-208ENST00000573716 UBE2E2Q96LR5 201 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 NR1H4Q96RI1 486 aaPredicted RBP9.45□□□□□ -0.9
PRPF8-208ENST00000573716 SPATA25Q9BR10 227 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 OSBPL10Q9BXB5 764 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 FAM107BQ9H098 131 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 COMMD4Q9H0A8 199 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 ALX4Q9H161 411 aaPredicted RBP9.45□□□□□ -0.9
PRPF8-208ENST00000573716 GHITMQ9H3K2 345 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 SLC25A19Q9HC21 320 aa9.45□□□□□ -0.9
PRPF8-208ENST00000573716 H2AFY2Q9P0M6 372 aaPredicted RBP9.45□□□□□ -0.9
PRPF8-208ENST00000573716 IGKV1-9A0A0C4DH69 117 aa9.44□□□□□ -0.9
PRPF8-208ENST00000573716 RBMY1BA6NDE4 496 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms