RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 TVP23CQ96ET8 276 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 PGLYRP3Q96LB9 341 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 CYTH2Q99418 400 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 TM2D3Q9BRN9 247 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 ULBP1Q9BZM6 244 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 RHOFQ9HBH0 211 aa2.52□□□□□ -2.01
SYNE2-210ENST00000553455 GOLGA8IPA6NC78 632 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 LEUTXA8MZ59 168 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 FOXA1P55317 472 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 GOLGA7BQ2TAP0 167 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 DEFB134Q4QY38 66 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 AMMECR1LQ6DCA0 310 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 ZNF470Q6ECI4 717 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 ELP2Q6IA86 826 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 CLEC20AQ6ZU45 233 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 COMTD1Q86VU5 262 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 SELENOHQ8IZQ5 122 aaKnown RBP2.51□□□□□ -2.01
SYNE2-210ENST00000553455 C17orf78Q8N4C9 275 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 RPRMLQ8N4K4 120 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 TAPBPLQ9BX59 468 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 TRAPPC1Q9Y5R8 145 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 SDK2Q58EX2 2172 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 UNC13AQ9UPW8 1703 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 ATRNO75882 1429 aa2.51□□□□□ -2.01
SYNE2-210ENST00000553455 POLR3AO14802 1390 aaPredicted RBP2.5□□□□□ -2.01
SYNE2-210ENST00000553455 NOTCH2Q04721 2471 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 ABCB11O95342 1321 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 IGHV1-45A0A0A0MS14 117 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 A0A1W2PRG6 482 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 FAM183AA6NL82 134 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 C8orf87E5RJ46 101 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 I3L4J1 428 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 POLR3GO15318 223 aaPredicted RBP2.5□□□□□ -2.01
SYNE2-210ENST00000553455 CRXO43186 299 aaPredicted RBP2.5□□□□□ -2.01
SYNE2-210ENST00000553455 IGHV3-53P01767 116 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 HLA-AP01891 365 aaKnown RBP2.5□□□□□ -2.01
SYNE2-210ENST00000553455 GABRA1P14867 456 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 SYT1P21579 422 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 RAB25P57735 213 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 C1QTNF8P60827 252 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 RAB31Q13636 194 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 FLOT2Q14254 428 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 FAM162BQ5T6X4 162 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 LAIR2Q6ISS4 152 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 PAGE2Q7Z2X7 111 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 SYCE1Q8N0S2 351 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 C3orf22Q8N5N4 141 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 PDCD6IPQ8WUM4 868 aaKnown RBP2.5□□□□□ -2.01
SYNE2-210ENST00000553455 MRAP2Q96G30 205 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 FAAP24Q9BTP7 215 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 GABARAPL1Q9H0R8 117 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 DSN1Q9H410 356 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 FBXL15Q9H469 300 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 DUSP21Q9H596 190 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 NRBP2Q9NSY0 501 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 TBL2Q9Y4P3 447 aaKnown RBP2.5□□□□□ -2.01
SYNE2-210ENST00000553455 FADS3Q9Y5Q0 445 aa2.5□□□□□ -2.01
SYNE2-210ENST00000553455 ZBED9Q6R2W3 1325 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 TRAV8-2A0A0B4J237 113 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 LINC00854A0A1B0GVQ3 168 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 IQCF5A8MTL0 148 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 TNFAIP8O95379 198 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 CPSF4O95639 269 aaKnown RBP2.49□□□□□ -2.01
SYNE2-210ENST00000553455 EPPINO95925 133 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 IGLV6-57P01721 117 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 IGHMP01871 453 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 MLNP12872 115 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 SPNP16150 400 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 PRPS1L1P21108 318 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 PSMB9P28065 219 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 IHHQ14623 411 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 CASP8Q14790 479 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 SPIN3Q5JUX0 258 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 USP50Q70EL3 339 aaPredicted RBP2.49□□□□□ -2.01
SYNE2-210ENST00000553455 FAM19A3Q7Z5A8 133 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 PYURFQ96I23 114 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 PRSS27Q9BQR3 290 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 TSSK6Q9BXA6 273 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 ASF1BQ9NVP2 202 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 MS4A12Q9NXJ0 267 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 BTRCQ9Y297 605 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 ZNF443Q9Y2A4 671 aaPredicted RBP2.49□□□□□ -2.01
SYNE2-210ENST00000553455 ZSWIM8A7E2V4 1837 aa2.49□□□□□ -2.01
SYNE2-210ENST00000553455 USP42Q9H9J4 1324 aaKnown RBP2.48□□□□□ -2.01
SYNE2-210ENST00000553455 A0A0B4J2C4 111 aa2.48□□□□□ -2.01
SYNE2-210ENST00000553455 TMEM250H0YL14 139 aa2.48□□□□□ -2.01
SYNE2-210ENST00000553455 H3BMM0 161 aa2.48□□□□□ -2.01
SYNE2-210ENST00000553455 POP7O75817 140 aaKnown RBP2.48□□□□□ -2.01
SYNE2-210ENST00000553455 IGKV4-1P06312 121 aa2.48□□□□□ -2.01
SYNE2-210ENST00000553455 UGT2B10P36537 528 aa2.48□□□□□ -2.01
SYNE2-210ENST00000553455 RHOAP61586 193 aa2.48□□□□□ -2.01
SYNE2-210ENST00000553455 ZNF141Q15928 474 aa2.48□□□□□ -2.01
SYNE2-210ENST00000553455 TAF9Q16594 264 aa2.48□□□□□ -2.01
SYNE2-210ENST00000553455 BRD3OSQ6XYD6 125 aa2.48□□□□□ -2.01
SYNE2-210ENST00000553455 ZNF738Q8NE65 137 aa2.48□□□□□ -2.01
SYNE2-210ENST00000553455 CASTOR1Q8WTX7 329 aa2.48□□□□□ -2.01
SYNE2-210ENST00000553455 GTF2H4Q92759 462 aa2.48□□□□□ -2.01
SYNE2-210ENST00000553455 UBE2WQ96B02 151 aa2.48□□□□□ -2.01
SYNE2-210ENST00000553455 CCDC127Q96BQ5 260 aa2.48□□□□□ -2.01
SYNE2-210ENST00000553455 REEP6Q96HR9 211 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms