RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SHBQ15464 509 aa15.22■□□□□ 0.03
RAB40C-205ENST00000539661 SUMF1Q8NBK3 374 aa15.22■□□□□ 0.03
RAB40C-205ENST00000539661 THAP3Q8WTV1 239 aaPredicted RBP15.22■□□□□ 0.03
RAB40C-205ENST00000539661 NABP1Q96AH0 204 aa15.22■□□□□ 0.03
RAB40C-205ENST00000539661 P2RX4Q99571 388 aa15.22■□□□□ 0.03
RAB40C-205ENST00000539661 TGIF2Q9GZN2 237 aa15.22■□□□□ 0.03
RAB40C-205ENST00000539661 ZNF581Q9P0T4 197 aa15.22■□□□□ 0.03
RAB40C-205ENST00000539661 A8MWP6 167 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 PDCD6O75340 191 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 OPN1LWP04000 364 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 PGA5P0DJD9 388 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 EPHA1P21709 976 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 PTGDSP41222 190 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 SMOC1Q9H4F8 434 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 SDF2L1Q9HCN8 221 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 IGKV1-27A0A075B6S5 117 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 FUT3P21217 361 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 RAB11AP62491 216 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 MALLQ13021 153 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 WDR5BQ86VZ2 330 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 DYRK2Q92630 601 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 BORCS8Q96FH0 119 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 POM121Q96HA1 1249 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 GPR87Q9BY21 358 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 CD207Q9UJ71 328 aa15.21■□□□□ 0.03
RAB40C-205ENST00000539661 NCOA6Q14686 2063 aaPredicted RBP15.21■□□□□ 0.02
RAB40C-205ENST00000539661 CST7O76096 145 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 BCL2P10415 239 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 RUNX1Q01196 453 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 NMSQ5H8A3 153 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 CXorf66Q5JRM2 361 aaPredicted RBP15.2■□□□□ 0.02
RAB40C-205ENST00000539661 ANKRD37Q7Z713 158 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 TBC1D26Q86UD7 250 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 C20orf196Q8IYI0 205 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 OR2M3Q8NG83 312 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 MISP3Q96FF7 219 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 SNX22Q96L94 193 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 SIGLEC12Q96PQ1 595 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 CABLES2Q9BTV7 478 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 NDUFAF3Q9BU61 184 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 METTL7AQ9H8H3 244 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 SHISA7A6NL88 538 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 ADAM20O43506 726 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 VDAC1P21796 283 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 IGFBP4P22692 258 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 GNRHRP30968 328 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 SNAI3Q3KNW1 292 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 ACSF3Q4G176 576 aaPredicted RBP15.2■□□□□ 0.02
RAB40C-205ENST00000539661 COA6Q5JTJ3 125 aaKnown RBP15.2■□□□□ 0.02
RAB40C-205ENST00000539661 ZNF385CQ66K41 422 aaPredicted RBP15.2■□□□□ 0.02
RAB40C-205ENST00000539661 P4HA3Q7Z4N8 544 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 OR10A7Q8NGE5 316 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 MAGT1Q9H0U3 335 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 SRD5A3Q9H8P0 318 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 GNG13Q9P2W3 67 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 ASPMQ8IZT6 3477 aa15.2■□□□□ 0.02
RAB40C-205ENST00000539661 FAM221AA4D161 298 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 C2CD4DB7Z1M9 353 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 GZMBP10144 247 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 PIGYQ3MUY2 71 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 C4orf17Q53FE4 359 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 Q6ZS49 121 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 SHISA6Q6ZSJ9 500 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 NEU1Q99519 415 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 PLEK2Q9NYT0 353 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 TCN2P20062 427 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 NPBWR2P48146 333 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 ZFP36L1Q07352 338 aaKnown RBP15.19■□□□□ 0.02
RAB40C-205ENST00000539661 MBD3L1Q8WWY6 194 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 IL22RA2Q969J5 263 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 CRLF2Q9HC73 371 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 RNF150Q9ULK6 438 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 ST3GAL6Q9Y274 331 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 RALGAPA1Q6GYQ0 2036 aa15.19■□□□□ 0.02
RAB40C-205ENST00000539661 TMEM50AO95807 157 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 GCGP01275 180 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 IFNA5P01569 189 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 BTF3P20290 206 aaKnown RBP15.18■□□□□ 0.02
RAB40C-205ENST00000539661 TCEAL6Q6IPX3 200 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 PLXDC1Q8IUK5 500 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 TMEM217Q8N7C4 229 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 OR2V1Q8NHB1 315 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 TPSD1Q9BZJ3 242 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 TRBV11-1A0A0K0K1C0 115 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 DHHO43323 396 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 UCP1P25874 307 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 ZNF154Q13106 437 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 SRSF7Q16629 238 aaKnown RBP eCLIP15.18■□□□□ 0.02
RAB40C-205ENST00000539661 TMEM42Q69YG0 159 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 ABLIM2Q6H8Q1 611 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 OR4X1Q8NH49 305 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 PLPPR1Q8TBJ4 325 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 SEMA5BQ9P283 1151 aa15.18■□□□□ 0.02
RAB40C-205ENST00000539661 IGKV1-12A0A0C4DH73 117 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 CHST1O43916 411 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 IGKV1D-12P01611 117 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 CRYGSP22914 178 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 PHYHD1Q5SRE7 291 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 BRICD5Q6PL45 260 aa15.17■□□□□ 0.02
RAB40C-205ENST00000539661 OR1P1Q8NH06 330 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms