RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 WDR25Q64LD2 544 aaPredicted RBP8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 DUX4L9Q6RFH8 374 aaPredicted RBP8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 ZNF841Q6ZN19 808 aa8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 ASCC1Q8N9N2 400 aaKnown RBP8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 CHST4Q8NCG5 386 aa8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 ZNRF1Q8ND25 227 aa8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 TMEM104Q8NE00 496 aa8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 TMEM185AQ8NFB2 350 aa8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 PPP1R35Q8TAP8 253 aa8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 ST8SIA4Q92187 359 aa8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 URM1Q9BTM9 101 aaKnown RBP8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 TMEM59Q9BXS4 323 aa8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 SELENOIQ9C0D9 397 aa8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM234AQ9H0X4 552 aa8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 DCSTAMPQ9H295 470 aa8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 KCNK15Q9H427 330 aa8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 DUX4Q9UBX2 424 aa8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 SLC25A10Q9UBX3 287 aaPredicted RBP8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 CEPT1Q9Y6K0 416 aa8.38□□□□□ -1.07
RAB11FIP3-211ENST00000495663 ABCA2Q9BZC7 2435 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 TMEM272A0A1B0GTI8 110 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM90A10PA6NDY2 464 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM90A18PA6NE21 464 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM90A16PA6NEW6 464 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM90A20PA6NIJ5 464 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM90A8PA6NJQ4 464 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM90A7PA6NKC0 464 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM90A22PA8MWA6 464 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM90A12PA8MX19 464 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM90A5PA8MXJ8 464 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM90A23PA8MXZ1 464 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 H3BUI4 141 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 SIRPB1O00241 398 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 GEMIN2O14893 280 aaKnown RBP8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 DEGS1O15121 323 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 PHF1O43189 567 aaPredicted RBP8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 OR7C1O76099 320 aaPredicted RBP8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 TK1P04183 234 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM90A15PP0C7V4 464 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM90A13PP0C7W8 464 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM90A14PP0C7W9 464 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM90A24PP0C7X0 464 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 IGHV4-31P0DP07 118 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 SELLP14151 372 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 NDUFB7P17568 137 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 GABRR1P24046 479 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 LMO1P25800 156 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 SCAND1P57086 179 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 RPS27AP62979 156 aaKnown RBP8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 LCN2P80188 198 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 QRFPP83859 136 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 UNC119Q13432 240 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 PDCD1Q15116 288 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 FAM189A2Q15884 450 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 TAF9Q16594 264 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 CD276Q5ZPR3 534 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 CYB5R2Q6BCY4 276 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 OR10K2Q6IF99 312 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 Q6P435 159 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 OR5D13Q8NGL4 314 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 NDNFQ8TB73 568 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 SLC25A46Q96AG3 418 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 ISOC1Q96CN7 298 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 SNX22Q96L94 193 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 MRI1Q9BV20 369 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 IFT22Q9H7X7 185 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 LPAR2Q9HBW0 351 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 OR5V1Q9UGF6 321 aa8.37□□□□□ -1.07
RAB11FIP3-211ENST00000495663 A0A0B4J203 849 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 SMIM31A0A1B0GVY4 71 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 H3BMQ9 156 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 K7N7A8 449 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 SLC33A1O00400 549 aaPredicted RBP8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 LDLRAD4O15165 306 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 ZNF737O75373 536 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 ECDO95905 644 aaPredicted RBP8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 MSMBP08118 114 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 RORCP51449 518 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 GRK1Q15835 563 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 ATAD3CQ5T2N8 411 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 C17orf107Q6ZR85 190 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 GDPD3Q7L5L3 318 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 GLCCI1Q86VQ1 547 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 OR8H2Q8N162 312 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 H1FXQ92522 213 aaKnown RBP8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 PTX4Q96A99 478 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 MSI2Q96DH6 328 aaKnown RBP8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 TM2D1Q9BX74 207 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 CHST6Q9GZX3 395 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 RBM38Q9H0Z9 239 aaKnown RBP8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 LPAR5Q9H1C0 372 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 CDIP1Q9H305 208 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 SPACA1Q9HBV2 294 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 NDUFA13Q9P0J0 144 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 ABRACLQ9P1F3 81 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 RAB22AQ9UL26 194 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 ETV7Q9Y603 341 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 CREBBPQ92793 2442 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 DSCAML1Q8TD84 2053 aa8.36□□□□□ -1.07
RAB11FIP3-211ENST00000495663 ZNF469Q96JG9 3925 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms