RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ZNF787Q6DD87 383 aa12.12□□□□□ -0.47
LRIF1-202ENST00000485275 GAPTQ8N292 157 aa12.12□□□□□ -0.47
LRIF1-202ENST00000485275 TOMM5Q8N4H5 51 aa12.12□□□□□ -0.47
LRIF1-202ENST00000485275 TPRX1Q8N7U7 411 aa12.12□□□□□ -0.47
LRIF1-202ENST00000485275 ASCC1Q8N9N2 400 aaKnown RBP12.12□□□□□ -0.47
LRIF1-202ENST00000485275 NEK7Q8TDX7 302 aa12.12□□□□□ -0.47
LRIF1-202ENST00000485275 SEBOXQ9HB31 216 aaPredicted RBP12.12□□□□□ -0.47
LRIF1-202ENST00000485275 CTSZQ9UBR2 303 aa12.12□□□□□ -0.47
LRIF1-202ENST00000485275 DSCAML1Q8TD84 2053 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 F12P00748 615 aaPredicted RBP12.11□□□□□ -0.47
LRIF1-202ENST00000485275 MT-ND4P03905 459 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 GLAP06280 429 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 SPNP16150 400 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 NAT1P18440 290 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 HLA-DMAP28067 261 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 RCVRNP35243 200 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 ACTBP60709 375 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 ACTG1P63261 375 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 MRPS11P82912 194 aaKnown RBP12.11□□□□□ -0.47
LRIF1-202ENST00000485275 ZNF497Q6ZNH5 498 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 GLCCI1Q86VQ1 547 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 HOGA1Q86XE5 327 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 POC5Q8NA72 575 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 OR4K15Q8NH41 348 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 TMEM246Q9BRR3 403 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 ST6GALNAC5Q9BVH7 336 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 POLQO75417 2590 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 ABCA12Q86UK0 2595 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 APCP25054 2843 aa12.11□□□□□ -0.47
LRIF1-202ENST00000485275 TRAV38-1A0A0B4J264 116 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 ISPDA4D126 451 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 M0QYG6 137 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 LYRM1O43325 122 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 EFNA4P52798 201 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 SSBP1Q04837 148 aaKnown RBP12.1□□□□□ -0.47
LRIF1-202ENST00000485275 AESQ08117 197 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 OR4C16Q8NGL9 310 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 MARVELD3Q96A59 401 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 TINAGL1Q9GZM7 467 aaPredicted RBP12.1□□□□□ -0.47
LRIF1-202ENST00000485275 HRASLSQ9HDD0 168 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 IFT46Q9NQC8 304 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 DLL4Q9NR61 685 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 GLS2Q9UI32 602 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 MEX3AA1L020 520 aaKnown RBP12.1□□□□□ -0.47
LRIF1-202ENST00000485275 K7N7A8 449 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 SIGLEC5O15389 551 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 TMPRSS2O15393 492 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 TK1P04183 234 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 CD74P04233 296 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 CSN2P05814 226 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 RCC1P18754 421 aaPredicted RBP12.1□□□□□ -0.47
LRIF1-202ENST00000485275 DTYMKP23919 212 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 RBM39Q14498 530 aaKnown RBP12.1□□□□□ -0.47
LRIF1-202ENST00000485275 GRK1Q15835 563 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 ATPAF1Q5TC12 328 aaPredicted RBP12.1□□□□□ -0.47
LRIF1-202ENST00000485275 ZNF880Q6PDB4 577 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 GDPD3Q7L5L3 318 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 NRARPQ7Z6K4 114 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 ZNF525Q8N782 197 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 BEST4Q8NFU0 473 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 ZNF665Q9H7R5 613 aa12.1□□□□□ -0.47
LRIF1-202ENST00000485275 CSF1P09603 554 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 HRH1P35367 487 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 GLIPR1P48060 266 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 INPP1P49441 399 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 DYRK1AQ13627 763 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 EDDM3AQ14507 147 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 ZNF561Q8N587 486 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 TMEM229BQ8NBD8 167 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 SETD6Q8TBK2 473 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 CCDC107Q8WV48 283 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 SNX22Q96L94 193 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 DCTN5Q9BTE1 182 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 CHODLQ9H9P2 273 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 Q9N2K0 584 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 KIF25Q9UIL4 384 aa12.09□□□□□ -0.47
LRIF1-202ENST00000485275 TRBV6-6A0A0A6YYG2 114 aa12.08□□□□□ -0.48
LRIF1-202ENST00000485275 VGLL3A8MV65 326 aa12.08□□□□□ -0.48
LRIF1-202ENST00000485275 ZNF735P0CB33 412 aa12.08□□□□□ -0.48
LRIF1-202ENST00000485275 MDH2P40926 338 aaKnown RBP12.08□□□□□ -0.48
LRIF1-202ENST00000485275 CBX5P45973 191 aa12.08□□□□□ -0.48
LRIF1-202ENST00000485275 TAS2R19P59542 299 aa12.08□□□□□ -0.48
LRIF1-202ENST00000485275 PAX5Q02548 391 aa12.08□□□□□ -0.48
LRIF1-202ENST00000485275 OXA1LQ15070 435 aa12.08□□□□□ -0.48
LRIF1-202ENST00000485275 RGS21Q2M5E4 152 aa12.08□□□□□ -0.48
LRIF1-202ENST00000485275 STEAP1BQ6NZ63 245 aa12.08□□□□□ -0.48
LRIF1-202ENST00000485275 TCF23Q7RTU1 214 aa12.08□□□□□ -0.48
LRIF1-202ENST00000485275 TMEM185AQ8NFB2 350 aa12.08□□□□□ -0.48
LRIF1-202ENST00000485275 OR56B4Q8NH76 319 aa12.08□□□□□ -0.48
LRIF1-202ENST00000485275 COX4I2Q96KJ9 171 aa12.08□□□□□ -0.48
LRIF1-202ENST00000485275 CHMP1AQ9HD42 196 aaPredicted RBP12.08□□□□□ -0.48
LRIF1-202ENST00000485275 KIAA2026Q5HYC2 2103 aa12.08□□□□□ -0.48
LRIF1-202ENST00000485275 CEACAM18A8MTB9 384 aa12.07□□□□□ -0.48
LRIF1-202ENST00000485275 ZNF736B4DX44 427 aaPredicted RBP12.07□□□□□ -0.48
LRIF1-202ENST00000485275 H3BUI4 141 aa12.07□□□□□ -0.48
LRIF1-202ENST00000485275 FSTL3O95633 263 aa12.07□□□□□ -0.48
LRIF1-202ENST00000485275 ECDO95905 644 aaPredicted RBP12.07□□□□□ -0.48
LRIF1-202ENST00000485275 PMP2P02689 132 aa12.07□□□□□ -0.48
LRIF1-202ENST00000485275 CCR6P51684 374 aa12.07□□□□□ -0.48
LRIF1-202ENST00000485275 IL13RA1P78552 427 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms