RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 CTXN2P0C2S0 81 aa17.21■□□□□ 0.35
CSPG5-203ENST00000456150 GNRHRP30968 328 aa17.21■□□□□ 0.35
CSPG5-203ENST00000456150 FLI1Q01543 452 aaPredicted RBP17.21■□□□□ 0.35
CSPG5-203ENST00000456150 NEK7Q8TDX7 302 aa17.21■□□□□ 0.35
CSPG5-203ENST00000456150 ADAT1Q9BUB4 502 aaKnown RBP17.21■□□□□ 0.35
CSPG5-203ENST00000456150 SPACA1Q9HBV2 294 aa17.21■□□□□ 0.35
CSPG5-203ENST00000456150 RCL1Q9Y2P8 373 aaKnown RBP17.21■□□□□ 0.35
CSPG5-203ENST00000456150 UBE2J1Q9Y385 318 aaPredicted RBP17.21■□□□□ 0.35
CSPG5-203ENST00000456150 DMXL1Q9Y485 3027 aa17.21■□□□□ 0.35
CSPG5-203ENST00000456150 CD300LBA8K4G0 201 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 SP1P08047 785 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 SFTA3P0C7M3 94 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 MEOX1P50221 254 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 DVL1P1P54792 670 aaPredicted RBP17.2■□□□□ 0.34
CSPG5-203ENST00000456150 FAM76BQ5HYJ3 339 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 SPIN3Q5JUX0 258 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 TMEM88Q6PEY1 159 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 COMMD1Q8N668 190 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 TMEM56Q96MV1 263 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 RIMS4Q9H426 269 aaPredicted RBP17.2■□□□□ 0.34
CSPG5-203ENST00000456150 TMEM56-RWDD3S4R434 201 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 ARHGAP21Q5T5U3 1957 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 ANKRD30BLA7E2S9 258 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 KLRC4-KLRK1H3BQV0 150 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 H7C2Y5 167 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 NME2P1O60361 137 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 NGFP01138 241 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 PVALBP20472 110 aaPredicted RBP17.2■□□□□ 0.34
CSPG5-203ENST00000456150 IL32P24001 234 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 APLNRP35414 380 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 KCNJ3P48549 501 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 TBC1D26Q86UD7 250 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 ZNF695Q8IW36 515 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 SECTM1Q8WVN6 248 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 GTF3AQ92664 365 aaKnown RBP17.2■□□□□ 0.34
CSPG5-203ENST00000456150 WNT2BQ93097 391 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 MPC1Q9Y5U8 109 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 FREM2Q5SZK8 3169 aa17.2■□□□□ 0.34
CSPG5-203ENST00000456150 FTH1P19P0C7X4 201 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 CLEC9AQ6UXN8 241 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 NUFIP2Q7Z417 695 aaKnown RBP17.19■□□□□ 0.34
CSPG5-203ENST00000456150 DMBX1Q8NFW5 382 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 BSCL2Q96G97 398 aaPredicted RBP17.19■□□□□ 0.34
CSPG5-203ENST00000456150 FER1L6-AS2Q96M78 137 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 ZNF552Q9H707 407 aaPredicted RBP17.19■□□□□ 0.34
CSPG5-203ENST00000456150 WFDC1Q9HC57 220 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 LUZP4Q9P127 313 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 ZDHHC8Q9ULC8 765 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 ATP23Q9Y6H3 246 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 DUXBA0A1W2PPF3 345 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 SCTP09683 121 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 DANCRP0C864 163 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 SPP1P10451 314 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 NPBWR1P48145 328 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 RAB5CP51148 216 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 ZNF573Q86YE8 665 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 CBLN2Q8IUK8 224 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 OR5P3Q8WZ94 311 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 HS3ST6Q96QI5 342 aa17.19■□□□□ 0.34
CSPG5-203ENST00000456150 OR5B21A6NL26 309 aa17.18■□□□□ 0.34
CSPG5-203ENST00000456150 AGPAT2O15120 278 aa17.18■□□□□ 0.34
CSPG5-203ENST00000456150 ZNHIT1O43257 154 aa17.18■□□□□ 0.34
CSPG5-203ENST00000456150 TUSC2O75896 110 aa17.18■□□□□ 0.34
CSPG5-203ENST00000456150 TSPAN15O95858 294 aa17.18■□□□□ 0.34
CSPG5-203ENST00000456150 F12P00748 615 aaPredicted RBP17.18■□□□□ 0.34
CSPG5-203ENST00000456150 OR8U9P0C7N5 309 aa17.18■□□□□ 0.34
CSPG5-203ENST00000456150 PRKACAP17612 351 aa17.18■□□□□ 0.34
CSPG5-203ENST00000456150 CD80P33681 288 aa17.18■□□□□ 0.34
CSPG5-203ENST00000456150 MDS2Q8NDY4 140 aa17.18■□□□□ 0.34
CSPG5-203ENST00000456150 OR8U1Q8NH10 309 aa17.18■□□□□ 0.34
CSPG5-203ENST00000456150 NANOS1Q8WY41 292 aaKnown RBP17.18■□□□□ 0.34
CSPG5-203ENST00000456150 ABHD14BQ96IU4 210 aa17.18■□□□□ 0.34
CSPG5-203ENST00000456150 KIRREL1Q96J84 757 aa17.18■□□□□ 0.34
CSPG5-203ENST00000456150 STRAPQ9Y3F4 350 aaKnown RBP17.18■□□□□ 0.34
CSPG5-203ENST00000456150 NKX2-6A6NCS4 301 aa17.17■□□□□ 0.34
CSPG5-203ENST00000456150 TNFSF15O95150 251 aa17.17■□□□□ 0.34
CSPG5-203ENST00000456150 NKX2-1P43699 371 aaPredicted RBP17.17■□□□□ 0.34
CSPG5-203ENST00000456150 GNG3P63215 75 aa17.17■□□□□ 0.34
CSPG5-203ENST00000456150 CLN3Q13286 438 aa17.17■□□□□ 0.34
CSPG5-203ENST00000456150 SLC10A1Q14973 349 aa17.17■□□□□ 0.34
CSPG5-203ENST00000456150 HFEQ30201 348 aa17.17■□□□□ 0.34
CSPG5-203ENST00000456150 ZNF818PQ6ZRF7 136 aa17.17■□□□□ 0.34
CSPG5-203ENST00000456150 IL36RNQ9UBH0 155 aa17.17■□□□□ 0.34
CSPG5-203ENST00000456150 SLC22A20A6NK97 555 aa17.17■□□□□ 0.34
CSPG5-203ENST00000456150 SYNGR1O43759 233 aa17.17■□□□□ 0.34
CSPG5-203ENST00000456150 HERPUD1Q15011 391 aa17.17■□□□□ 0.34
CSPG5-203ENST00000456150 C3AR1Q16581 482 aa17.17■□□□□ 0.34
CSPG5-203ENST00000456150 SELENOHQ8IZQ5 122 aaKnown RBP17.17■□□□□ 0.34
CSPG5-203ENST00000456150 GAPTQ8N292 157 aa17.17■□□□□ 0.34
CSPG5-203ENST00000456150 BOD1Q96IK1 185 aa17.17■□□□□ 0.34
CSPG5-203ENST00000456150 USB1Q9BQ65 265 aaKnown RBP17.17■□□□□ 0.34
CSPG5-203ENST00000456150 AHCTF1Q8WYP5 2266 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 TRBV6-6A0A0A6YYG2 114 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 HSPB6O14558 160 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 SLC34A2O95436 690 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 HEXAP06865 529 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 ID4P47928 161 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 CAMLGP49069 296 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 EWSR1Q01844 656 aaKnown RBP eCLIP17.16■□□□□ 0.34
CSPG5-203ENST00000456150 NHLH2Q02577 135 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms