RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 NPTNQ9Y639 398 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 SPTBN1Q01082 2364 aaKnown RBP15.53■□□□□ 0.08
USP39-201ENST00000323701 hCG_1807616A0A1W2PRN6 198 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 CRYZL1O95825 349 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 HLA-AP01891 365 aaKnown RBP15.53■□□□□ 0.08
USP39-201ENST00000323701 ANXA3P12429 323 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 EGR1P18146 543 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 DCAF12L2Q5VW00 463 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 SPERTQ8NA61 448 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 LINC01560Q8TB33 94 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 MRPL24Q96A35 216 aaKnown RBP15.53■□□□□ 0.08
USP39-201ENST00000323701 SLC23A1Q9UHI7 598 aa15.53■□□□□ 0.08
USP39-201ENST00000323701 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.52■□□□□ 0.08
USP39-201ENST00000323701 PSPNO60542 156 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 ACAA1P09110 424 aaPredicted RBP15.52■□□□□ 0.08
USP39-201ENST00000323701 SCTP09683 121 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 RCC1P18754 421 aaPredicted RBP15.52■□□□□ 0.08
USP39-201ENST00000323701 CHRNB4P30926 498 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 CD200P41217 278 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 HERPUD1Q15011 391 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 GRK1Q15835 563 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 ADIPOQQ15848 244 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 LIN54Q6MZP7 749 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 OR2AK2Q8NG84 335 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 SUN5Q8TC36 379 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 CCDC107Q8WV48 283 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 NEUROG1Q92886 237 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 RHOFQ9HBH0 211 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 ZNF286AQ9HBT8 521 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 PRR13Q9NZ81 148 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 COL12A1Q99715 3063 aa15.52■□□□□ 0.08
USP39-201ENST00000323701 PLSCR5A0PG75 271 aa15.52■□□□□ 0.07
USP39-201ENST00000323701 SFTPCP11686 197 aa15.52■□□□□ 0.07
USP39-201ENST00000323701 ACP7Q6ZNF0 438 aa15.52■□□□□ 0.07
USP39-201ENST00000323701 ZCCHC24Q8N2G6 241 aaKnown RBP15.52■□□□□ 0.07
USP39-201ENST00000323701 SPICQ8N5J4 248 aa15.52■□□□□ 0.07
USP39-201ENST00000323701 OR5T2Q8NGG2 359 aa15.52■□□□□ 0.07
USP39-201ENST00000323701 SPACA1Q9HBV2 294 aa15.52■□□□□ 0.07
USP39-201ENST00000323701 NECAP2Q9NVZ3 263 aa15.52■□□□□ 0.07
USP39-201ENST00000323701 METRNQ9UJH8 293 aa15.52■□□□□ 0.07
USP39-201ENST00000323701 KIAA2026Q5HYC2 2103 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 IGKV1-6A0A0C4DH72 117 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 C9orf170A2RU37 121 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 H3BUI4 141 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 HAND1O96004 215 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 NFYAP23511 347 aaPredicted RBP15.51■□□□□ 0.07
USP39-201ENST00000323701 FPR2P25090 351 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 RPS23P62266 143 aaKnown RBP15.51■□□□□ 0.07
USP39-201ENST00000323701 PAN3Q58A45 887 aaKnown RBP15.51■□□□□ 0.07
USP39-201ENST00000323701 DHRS11Q6UWP2 260 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 TMEM17Q86X19 198 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 TGIF2LYQ8IUE0 185 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 DMRTC2Q8IXT2 367 aaPredicted RBP15.51■□□□□ 0.07
USP39-201ENST00000323701 LRRC29Q8WV35 223 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 ITLN1Q8WWA0 313 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 MEGF10Q96KG7 1140 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 MGAT4AQ9UM21 535 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 TMEM8BA6NDV4 472 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 SUPT4H1P63272 117 aaKnown RBP15.51■□□□□ 0.07
USP39-201ENST00000323701 ATXN7L3Q14CW9 347 aaPredicted RBP15.51■□□□□ 0.07
USP39-201ENST00000323701 LYG2Q86SG7 212 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 MOGAT3Q86VF5 341 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 ATP23Q9Y6H3 246 aa15.51■□□□□ 0.07
USP39-201ENST00000323701 ABCA4P78363 2273 aa15.5■□□□□ 0.07
USP39-201ENST00000323701 GOSR2O14653 212 aa15.5■□□□□ 0.07
USP39-201ENST00000323701 IGHV1-46P01743 117 aa15.5■□□□□ 0.07
USP39-201ENST00000323701 OR4A8P0C604 315 aa15.5■□□□□ 0.07
USP39-201ENST00000323701 VAMP1P23763 118 aa15.5■□□□□ 0.07
USP39-201ENST00000323701 FCGR2CP31995 323 aa15.5■□□□□ 0.07
USP39-201ENST00000323701 LY6G6FQ5SQ64 297 aa15.5■□□□□ 0.07
USP39-201ENST00000323701 C12orf45Q8N5I9 185 aaPredicted RBP15.5■□□□□ 0.07
USP39-201ENST00000323701 CASTOR1Q8WTX7 329 aa15.5■□□□□ 0.07
USP39-201ENST00000323701 CACNA1BQ00975 2339 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 RFPL4AA6NLU0 287 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 SHISA9B4DS77 424 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 RFPL4AL1F8VTS6 287 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 SH2D1BO14796 132 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 SIAH2O43255 324 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 TSC22D2O75157 780 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 ZNF81P51508 661 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 IL13RA1P78552 427 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 FBXL19-AS1Q494R0 122 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 SPIN3Q5JUX0 258 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 FAM201AQ5SY85 155 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 TMEM185AQ8NFB2 350 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 FXYD6Q9H0Q3 95 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 DECR2Q9NUI1 292 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 TREM2Q9NZC2 230 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 RPS2P15880 293 aaKnown RBP15.49■□□□□ 0.07
USP39-201ENST00000323701 UQCRFS1P47985 274 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 FXYD4P59646 89 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 Q6ZS49 121 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 GCSAMQ8N6F7 178 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 BOLLQ8N9W6 283 aaKnown RBP15.49■□□□□ 0.07
USP39-201ENST00000323701 OR2T35Q8NGX2 323 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 PLPPR2Q96GM1 343 aa15.49■□□□□ 0.07
USP39-201ENST00000323701 CCSO14618 274 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 OR2A4O95047 310 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 PLAUP00749 431 aa15.48■□□□□ 0.07
USP39-201ENST00000323701 KNG1P01042 644 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms