RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 DHRS11Q6UWP2 260 aa19.23■□□□□ 0.67
PTX3-201ENST00000295927 PLPPR1Q8TBJ4 325 aa19.23■□□□□ 0.67
PTX3-201ENST00000295927 SCGB3A2Q96PL1 93 aa19.23■□□□□ 0.67
PTX3-201ENST00000295927 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.23■□□□□ 0.67
PTX3-201ENST00000295927 SERPINF1P36955 418 aa19.23■□□□□ 0.67
PTX3-201ENST00000295927 BAMBIQ13145 260 aa19.23■□□□□ 0.67
PTX3-201ENST00000295927 ZFP69Q49AA0 526 aa19.23■□□□□ 0.67
PTX3-201ENST00000295927 C5orf24Q7Z6I8 188 aa19.23■□□□□ 0.67
PTX3-201ENST00000295927 GCSAMQ8N6F7 178 aa19.23■□□□□ 0.67
PTX3-201ENST00000295927 TMPRSS13Q9BYE2 586 aa19.23■□□□□ 0.67
PTX3-201ENST00000295927 C5orf66Q9H5L9 145 aa19.23■□□□□ 0.67
PTX3-201ENST00000295927 CACNA1DQ01668 2161 aa19.22■□□□□ 0.67
PTX3-201ENST00000295927 RFPL4AA6NLU0 287 aa19.22■□□□□ 0.67
PTX3-201ENST00000295927 RFPL4AL1F8VTS6 287 aa19.22■□□□□ 0.67
PTX3-201ENST00000295927 ZNF205O95201 554 aa19.22■□□□□ 0.67
PTX3-201ENST00000295927 NKX2-5P52952 324 aaPredicted RBP19.22■□□□□ 0.67
PTX3-201ENST00000295927 UBE2MP61081 183 aaKnown RBP19.22■□□□□ 0.67
PTX3-201ENST00000295927 DHRS2Q13268 280 aa19.22■□□□□ 0.67
PTX3-201ENST00000295927 IGSF11Q5DX21 431 aa19.22■□□□□ 0.67
PTX3-201ENST00000295927 ZNF880Q6PDB4 577 aa19.22■□□□□ 0.67
PTX3-201ENST00000295927 USP24Q9UPU5 2620 aa19.22■□□□□ 0.67
PTX3-201ENST00000295927 MEIKINA0A087WXM9 373 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 TRDCB7Z8K6 153 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 SIAH2O43255 324 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 PSPNO60542 156 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 TFF1P04155 84 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 SCTP09683 121 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 AKR1C4P17516 323 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 PPP1R1AQ13522 171 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 ATXN7L3Q14CW9 347 aaPredicted RBP19.21■□□□□ 0.67
PTX3-201ENST00000295927 BEX5Q5H9J7 111 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 FAHD2BQ6P2I3 314 aaPredicted RBP19.21■□□□□ 0.67
PTX3-201ENST00000295927 ZNF497Q6ZNH5 498 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 BOLLQ8N9W6 283 aaKnown RBP19.21■□□□□ 0.67
PTX3-201ENST00000295927 FAHD2AQ96GK7 314 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 GCM1Q9NP62 436 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 MGAT4CQ9UBM8 478 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 ROS1P08922 2347 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 IGSF10Q6WRI0 2623 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 KIR2DS1A0A191URI9 304 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 C17orf100A8MU93 164 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 FABP7O15540 132 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 PLAUP00749 431 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 LHBP01229 141 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 ADH4P08319 380 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 ANXA3P12429 323 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 PI3P19957 117 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 ZBTB25P24278 435 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 KIR2DS4P43632 304 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 TLE1Q04724 770 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 KIR2DS1Q14954 304 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 SPICQ8N5J4 248 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 OR5T2Q8NGG2 359 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 DIRC2Q96SL1 478 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 RTBDNQ9BSG5 229 aaPredicted RBP19.21■□□□□ 0.67
PTX3-201ENST00000295927 RNF115Q9Y4L5 304 aa19.21■□□□□ 0.67
PTX3-201ENST00000295927 IFNL4K9M1U5 179 aa19.2■□□□□ 0.66
PTX3-201ENST00000295927 HLA-AP01891 365 aaKnown RBP19.2■□□□□ 0.66
PTX3-201ENST00000295927 RCC1P18754 421 aaPredicted RBP19.2■□□□□ 0.66
PTX3-201ENST00000295927 FCGR2CP31995 323 aa19.2■□□□□ 0.66
PTX3-201ENST00000295927 ECI1P42126 302 aa19.2■□□□□ 0.66
PTX3-201ENST00000295927 TAS2R31P59538 309 aa19.2■□□□□ 0.66
PTX3-201ENST00000295927 SURF2Q15527 256 aaPredicted RBP19.2■□□□□ 0.66
PTX3-201ENST00000295927 LYG2Q86SG7 212 aa19.2■□□□□ 0.66
PTX3-201ENST00000295927 FAM90A1Q86YD7 464 aa19.2■□□□□ 0.66
PTX3-201ENST00000295927 GAPTQ8N292 157 aa19.2■□□□□ 0.66
PTX3-201ENST00000295927 UXS1Q8NBZ7 420 aa19.2■□□□□ 0.66
PTX3-201ENST00000295927 TMEM185AQ8NFB2 350 aa19.2■□□□□ 0.66
PTX3-201ENST00000295927 DECR2Q9NUI1 292 aa19.2■□□□□ 0.66
PTX3-201ENST00000295927 METRNQ9UJH8 293 aa19.2■□□□□ 0.66
PTX3-201ENST00000295927 WIPI2Q9Y4P8 454 aa19.2■□□□□ 0.66
PTX3-201ENST00000295927 H7C1Q1 480 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 M0R233 179 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 ZG16O60844 167 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 PSG2P11465 335 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 PGAM2P15259 253 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 CD177Q8N6Q3 437 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 TMEM230Q96A57 120 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 C9orf170A2RU37 121 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 SMLR1H3BR10 107 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 CD55P08174 381 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 APOBEC3AP31941 199 aaPredicted RBP19.19■□□□□ 0.66
PTX3-201ENST00000295927 GLP1RP43220 463 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 COL10A1Q03692 680 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 ZCCHC24Q8N2G6 241 aaKnown RBP19.19■□□□□ 0.66
PTX3-201ENST00000295927 C12orf45Q8N5I9 185 aaPredicted RBP19.19■□□□□ 0.66
PTX3-201ENST00000295927 DRAXINQ8NBI3 349 aaPredicted RBP19.19■□□□□ 0.66
PTX3-201ENST00000295927 OR2AK2Q8NG84 335 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 ERGIC1Q969X5 290 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 ZNF436Q9C0F3 470 aaPredicted RBP19.19■□□□□ 0.66
PTX3-201ENST00000295927 RNF7Q9UBF6 113 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 DNAJB11Q9UBS4 358 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 NPTNQ9Y639 398 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 DYSFO75923 2080 aa19.19■□□□□ 0.66
PTX3-201ENST00000295927 ANKHD1Q8IWZ3 2542 aaKnown RBP19.18■□□□□ 0.66
PTX3-201ENST00000295927 POM121CA8CG34 1229 aa19.18■□□□□ 0.66
PTX3-201ENST00000295927 PRDX2P32119 198 aa19.18■□□□□ 0.66
PTX3-201ENST00000295927 SEC61A1P61619 476 aaKnown RBP19.18■□□□□ 0.66
PTX3-201ENST00000295927 IL13RA1P78552 427 aa19.18■□□□□ 0.66
PTX3-201ENST00000295927 CCL8P80075 99 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms