RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 OR10D4PQ8NGN7 298 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 OR4S2Q8NH73 311 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 MRPL24Q96A35 216 aaKnown RBP16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 MS4A18H0YCH9 400 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 DAOP14920 347 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 ECSCRQ19T08 205 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 MS4A18Q3C1V0 323 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 SLC23A3Q6PIS1 610 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 RNF165Q6ZSG1 346 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 ADAMTS17Q8TE56 1095 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 ASB5Q8WWX0 329 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 WDFY2Q96P53 400 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 OPN3Q9H1Y3 402 aaPredicted RBP16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 PRSS44E7EML9 344 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 NKX2-8O15522 239 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 GATCO43716 136 aaKnown RBP16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 OOEPA6NGQ2 149 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 CST2P09228 141 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 CD40P25942 277 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 NHLH1Q02575 133 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 NHLH2Q02577 135 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 PRSS3P2Q8NHM4 247 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 FKBP11Q9NYL4 201 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 CACFD1Q9UGQ2 172 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 RAB5AP20339 215 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 TGIF1Q15583 401 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 CARFQ8N187 725 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 NTNG2Q96CW9 530 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 RNF2Q99496 336 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 TMEM204Q9BSN7 226 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 TMEM38BQ9NVV0 291 aa16.38■□□□□ 0.21
SMARCC1-201ENST00000254480 OR5AL1P0C617 328 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 TUSC1Q2TAM9 212 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 OR4P4Q8NGL7 312 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 NEIL1Q96FI4 390 aaPredicted RBP16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 G0S2P27469 103 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 NAAAQ02083 359 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 PRSS54Q6PEW0 395 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 TRAT1Q6PIZ9 186 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 RNF7Q9UBF6 113 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 OGG1O15527 345 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 ANKRD34CP0C6C1 535 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 MPV17LQ2QL34 196 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 LSMEM1Q8N8F7 131 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 MS4A3Q96HJ5 214 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 GNG7O60262 68 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 ARG1P05089 322 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 SCGB1C2P0DMR2 95 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 COL13A1Q5TAT6 717 aaPredicted RBP16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 LYZL2Q7Z4W2 148 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 RASL11BQ9BPW5 248 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 ZNF716A6NP11 495 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 DCAF16Q9NXF7 216 aa16.37■□□□□ 0.21
SMARCC1-201ENST00000254480 C21orf140B9A014 251 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 PSG5Q15238 335 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 LRP11Q86VZ4 500 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 SPICQ8N5J4 248 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 SF3B5Q9BWJ5 86 aaKnown RBP16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 PRO1933Q9H354 126 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 INSIG2Q9Y5U4 225 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 VPS25Q9BRG1 176 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 SH2D2AQ9NP31 389 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 IGF2P01344 180 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 KIR2DS2P43631 304 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 LSM6P62312 80 aaKnown RBP16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 IL22RA2Q969J5 263 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 ISOC2Q96AB3 205 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 EPOPA6NHQ4 379 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 GSTZ1O43708 216 aaPredicted RBP16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 USF1P22415 310 aaPredicted RBP16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 SLC6A1P30531 599 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 SNRPEP62304 92 aaKnown RBP16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 PRDM6Q9NQX0 595 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 THYN1Q9P016 225 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 CABIN1Q9Y6J0 2220 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 SYNGR2O43760 224 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 PPYP01298 95 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 INHBBP09529 407 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 PPP1CCP36873 323 aaKnown RBP16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 HNRNPA3P51991 378 aaKnown RBP16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 NHLRC2Q8NBF2 726 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 CLRN3Q8NCR9 226 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 VAMP8Q9BV40 100 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 MIXL1Q9H2W2 232 aa16.36■□□□□ 0.21
SMARCC1-201ENST00000254480 IGHV3-72A0A0B4J1Y9 119 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 CTSBP07858 339 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 WNT5AP41221 380 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 IL13RA2Q14627 380 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 ATP1A1-AS1Q5TC04 95 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 RGP1Q92546 391 aaPredicted RBP16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 ASCL3Q9NQ33 180 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 ISXQ2M1V0 245 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 LINC00052Q96N35 136 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 OR4C45A6NMZ5 311 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 GALP22466 123 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 CLLU1Q5K131 121 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 IGKV1-8A0A0C4DH67 115 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 A0A0J9YW62 118 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 NKX2-6A6NCS4 301 aa16.35■□□□□ 0.21
SMARCC1-201ENST00000254480 PSG2P11465 335 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms