RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Ear3O35290 156 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gpm6aP35802 278 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 RorcP51450 516 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Tmem41bQ8K1A5 291 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 MpiQ924M7 423 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Spint2Q9WU03 252 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr1326-ps1A0A140T8J7 311 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gm36864A0A1Y7VJE6 447 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cldn20G5E8X0 219 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 P01881 257 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 P01882 290 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 PdgfbP31240 241 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 NodalP43021 354 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Bmp5P49003 452 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 NrtnP97463 195 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Patz1Q5NBY9 687 aaKnown RBP13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 1810024B03RikQ8BWE1 200 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Asb10Q91ZT7 467 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Bbc3Q99ML1 193 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 2610524H06RikQ9CZU9 139 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Ptp4a3Q9D658 173 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Slco5a1E9PVD9 850 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cypt4Q6P925 153 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Lsm10Q8QZX5 122 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Ms4a4cQ9D3F6 226 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Trex2Q9R1A9 236 aa13.91□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Ighv1-43A0A0A6YXN5 117 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Igkv12-44A0A140T8M2 115 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cdx2P43241 311 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Hsd17b8P50171 259 aaKnown RBP13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Abcd3P55096 659 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 March1Q6NZQ8 289 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Zc3h12dQ8BIY3 533 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vmn1r19Q8R2C7 308 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr512Q8VFZ4 326 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Syt17Q920M7 470 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Sbf1Q6ZPE2 1867 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vmn1r174E9PYW5 313 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vmn1r173E9Q8V7 313 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Spsb2O88838 264 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Rpl12P35979 165 aaKnown RBP13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 ArsbP50429 534 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gpr137Q80ZU9 396 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gins1Q9CZ15 196 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gm3550W4VSN7 160 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 SpxD3Z752 116 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Nipsnap1O55125 284 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Scgb2b26Q8JZX1 112 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr862Q8VFJ1 306 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cisd2Q9CQB5 135 aaKnown RBP13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Tmbim7Q9D592 302 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 RetnlaQ9EP95 111 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Zfp825A0A1Y7VK00 292 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr1507Q0VEP0 313 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Zdhhc8Q5Y5T5 762 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Ceacam14Q78Y72 263 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr1287Q7TQY1 305 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vmn1r89Q8R256 316 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Sfrp5Q9WU66 314 aa13.9□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Raet1aO08602 253 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Raet1bO08603 253 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 MestQ07646 335 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Defb46Q4QY34 57 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr145Q60882 310 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Taf9Q8VI33 264 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Slc7a12Q8VIE6 465 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Ankrd10Q99LW0 415 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Chchd2Q9D1L0 153 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Q9DAE7 121 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr573-ps1A0A1B0GRU2 297 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr1314A2AVL6 312 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Ifna1P01572 189 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gcnt2P97402 401 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Txn2P97493 166 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Bcl2l15Q08ED0 167 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 SheQ8BSD5 492 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 TigarQ8BZA9 269 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Scgb2b27Q8R1E9 112 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr360Q8VFP3 317 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Prb1Q91X93 504 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Aig1Q9D8B1 262 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 1700020A23RikQ9DA59 131 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 PrnA0A075B668 197 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 MfngO09008 321 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr10Q60883 311 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 CebpeQ6PZD9 281 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr1132Q8VG97 308 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 MmachcQ9CZD0 279 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Bola1Q9D8S9 137 aaKnown RBP13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 PrndQ9QUG3 179 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr1410E9PYK6 323 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Gm8660K7N6J2 305 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Ntn1O09118 604 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Rab11aP62492 216 aaKnown RBP13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 MamstrQ0ZCJ7 421 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Tcfl5Q32NY8 489 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Ndufb6Q3UIU2 128 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Pafah1b3Q61205 232 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr782Q7TRI2 314 aa13.89□□□□□ -0.19
Ccdc88b-201ENSMUST00000113440 Olfr790Q8VGJ3 322 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 106.6 ms