Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Gm25239-201ENSMUST00000174915 86 ntBASIC32.4■■■□□ 2.78
Raet1bO08603 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Raet1bO08603 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Raet1bO08603 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Raet1bO08603 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Raet1bO08603 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
Raet1bO08603 Gm15042-201ENSMUST00000120212 883 ntBASIC28.79■■■□□ 2.2
Raet1bO08603 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Raet1bO08603 Gm15045-201ENSMUST00000117359 883 ntBASIC28.24■■■□□ 2.11
Raet1bO08603 Psd-208ENSMUST00000224556 2034 ntBASIC28.22■■■□□ 2.11
Raet1bO08603 Gm24109-201ENSMUST00000175489 103 ntBASIC27.86■■■□□ 2.05
Raet1bO08603 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Raet1bO08603 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Raet1bO08603 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.71■■■□□ 2.03
Raet1bO08603 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Raet1bO08603 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Raet1bO08603 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Raet1bO08603 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Raet1bO08603 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Raet1bO08603 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Raet1bO08603 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Raet1bO08603 Gm23366-201ENSMUST00000175022 89 ntBASIC27.13■■□□□ 1.93
Raet1bO08603 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Raet1bO08603 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Raet1bO08603 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Raet1bO08603 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Raet1bO08603 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.98■■□□□ 1.91
Raet1bO08603 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Raet1bO08603 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Raet1bO08603 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Raet1bO08603 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Raet1bO08603 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Raet1bO08603 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.69■■□□□ 1.86
Raet1bO08603 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Raet1bO08603 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Raet1bO08603 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Raet1bO08603 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Raet1bO08603 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.44■■□□□ 1.82
Raet1bO08603 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Raet1bO08603 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Raet1bO08603 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.23■■□□□ 1.79
Raet1bO08603 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Raet1bO08603 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Raet1bO08603 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.98■■□□□ 1.75
Raet1bO08603 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.96■■□□□ 1.75
Raet1bO08603 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Raet1bO08603 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Raet1bO08603 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Raet1bO08603 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.74■■□□□ 1.71
Raet1bO08603 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Raet1bO08603 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Raet1bO08603 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Raet1bO08603 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Raet1bO08603 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Raet1bO08603 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Raet1bO08603 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Raet1bO08603 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Raet1bO08603 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Raet1bO08603 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Raet1bO08603 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
Raet1bO08603 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.43■■□□□ 1.66
Raet1bO08603 Gm25238-201ENSMUST00000174914 89 ntBASIC25.42■■□□□ 1.66
Raet1bO08603 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
Raet1bO08603 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Raet1bO08603 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Raet1bO08603 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.34■■□□□ 1.65
Raet1bO08603 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Raet1bO08603 Gm27325-201ENSMUST00000175467 74 ntBASIC25.32■■□□□ 1.64
Raet1bO08603 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.32■■□□□ 1.64
Raet1bO08603 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.29■■□□□ 1.64
Raet1bO08603 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Raet1bO08603 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.16■■□□□ 1.62
Raet1bO08603 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.13■■□□□ 1.61
Raet1bO08603 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Raet1bO08603 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Raet1bO08603 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Raet1bO08603 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Raet1bO08603 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Raet1bO08603 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
Raet1bO08603 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Raet1bO08603 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Raet1bO08603 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Raet1bO08603 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Raet1bO08603 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Raet1bO08603 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Raet1bO08603 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Raet1bO08603 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Raet1bO08603 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Raet1bO08603 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.78■■□□□ 1.56
Raet1bO08603 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.77■■□□□ 1.56
Raet1bO08603 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Raet1bO08603 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Raet1bO08603 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.72■■□□□ 1.55
Raet1bO08603 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Raet1bO08603 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Raet1bO08603 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Raet1bO08603 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Raet1bO08603 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Raet1bO08603 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.6■■□□□ 1.53
Raet1bO08603 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms