RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR50, Length 90 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR50	snR50	YLR281C	Q05863	155 aa		0.51	□□□□□ -2.33
snR50	snR50	RGC1	Q06108	1083 aa	Known RBP	0.51	□□□□□ -2.33
snR50	snR50	ESC2	Q06340	456 aa		0.51	□□□□□ -2.33
snR50	snR50	SPN1	Q06505	410 aa	Predicted RBP	0.51	□□□□□ -2.33
snR50	snR50	ENV7	Q12003	364 aa		0.51	□□□□□ -2.33
snR50	snR50	RPL7B	Q12213	244 aa	Known RBP	0.51	□□□□□ -2.33
snR50	snR50	RDL1	Q12305	139 aa	Known RBP	0.51	□□□□□ -2.33
snR50	snR50	YLR111W	Q12528	110 aa		0.51	□□□□□ -2.33
snR50	snR50	ERG6	P25087	383 aa	Known RBP	0.5	□□□□□ -2.33
snR50	snR50	MCM2	P29469	868 aa		0.5	□□□□□ -2.33
snR50	snR50	NTH1	P32356	751 aa		0.5	□□□□□ -2.33
snR50	snR50	ABD1	P32783	436 aa	Predicted RBP	0.5	□□□□□ -2.33
snR50	snR50	BCS1	P32839	456 aa		0.5	□□□□□ -2.33
snR50	snR50	HES1	P35843	434 aa		0.5	□□□□□ -2.33
snR50	snR50	MRPL4	P36517	319 aa		0.5	□□□□□ -2.33
snR50	snR50	YHR097C	P38809	366 aa	Known RBP	0.5	□□□□□ -2.33
snR50	snR50	TOM71	P38825	639 aa	Known RBP	0.5	□□□□□ -2.33
snR50	snR50	GID8	P40208	455 aa		0.5	□□□□□ -2.33
snR50	snR50	KHA1	P40309	873 aa		0.5	□□□□□ -2.33
snR50	snR50	OPT1	P40897	799 aa		0.5	□□□□□ -2.33
snR50	snR50	MPS3	P47069	682 aa		0.5	□□□□□ -2.33
snR50	snR50	THI22	Q06490	572 aa		0.5	□□□□□ -2.33
snR50	snR50	DIA2	Q08496	732 aa	Predicted RBP	0.5	□□□□□ -2.33
snR50	snR50	ATX2	Q12067	313 aa		0.5	□□□□□ -2.33
snR50	snR50	CHS5	Q12114	671 aa	Known RBP	0.5	□□□□□ -2.33
snR50	snR50	CPA2	P03965	1118 aa	Known RBP	0.49	□□□□□ -2.33
snR50	snR50	SRD1	P09007	221 aa		0.49	□□□□□ -2.33
snR50	snR50	AQY1	P0CD91	305 aa		0.49	□□□□□ -2.33
snR50	snR50	YMR085W	P0CF18	432 aa		0.49	□□□□□ -2.33
snR50	snR50	RNR1	P21524	888 aa	Known RBP	0.49	□□□□□ -2.33
snR50	snR50	DAL7	P21826	554 aa		0.49	□□□□□ -2.33
snR50	snR50	VBA3	P25594	458 aa		0.49	□□□□□ -2.33
snR50	snR50	PPZ1	P26570	692 aa		0.49	□□□□□ -2.33
snR50	snR50	MSS1	P32559	526 aa	Predicted RBP	0.49	□□□□□ -2.33
snR50	snR50	SRP40	P32583	406 aa	Predicted RBP	0.49	□□□□□ -2.33
snR50	snR50	HBS1	P32769	611 aa	Known RBP	0.49	□□□□□ -2.33
snR50	snR50	EMC3	P36039	253 aa		0.49	□□□□□ -2.33
snR50	snR50	VBA5	P36172	582 aa		0.49	□□□□□ -2.33
snR50	snR50	MRPL7	P36519	292 aa		0.49	□□□□□ -2.33
snR50	snR50	RKM3	P38222	552 aa		0.49	□□□□□ -2.33
snR50	snR50	PBY1	P38254	753 aa		0.49	□□□□□ -2.33
snR50	snR50	PIH1	P38768	344 aa		0.49	□□□□□ -2.33
snR50	snR50	NOP9	P47077	666 aa	Known RBP	0.49	□□□□□ -2.33
snR50	snR50	TAD1	P53065	400 aa		0.49	□□□□□ -2.33
snR50	snR50	HOS2	P53096	452 aa	Predicted RBP	0.49	□□□□□ -2.33
snR50	snR50	VTC3	Q02725	835 aa		0.49	□□□□□ -2.33
snR50	snR50	SPR28	Q04921	423 aa		0.49	□□□□□ -2.33
snR50	snR50	REH1	Q06709	432 aa		0.49	□□□□□ -2.33
snR50	snR50	MLH2	Q07980	695 aa		0.49	□□□□□ -2.33
snR50	snR50	DSE3	Q08729	430 aa		0.49	□□□□□ -2.33
snR50	snR50	ZPS1	Q12512	249 aa		0.49	□□□□□ -2.33
snR50	snR50	YBR182C-A	Q8TGU6	64 aa		0.49	□□□□□ -2.33
snR50	snR50	AIM44	Q99299	758 aa		0.49	□□□□□ -2.33
snR50	snR50	YCL002C	P25565	263 aa		0.48	□□□□□ -2.33
snR50	snR50	LDB16	P25587	256 aa		0.48	□□□□□ -2.33
snR50	snR50	CDC11	P32458	415 aa		0.48	□□□□□ -2.33
snR50	snR50	MRP8	P35719	219 aa		0.48	□□□□□ -2.33
snR50	snR50	ERT1	P38140	529 aa		0.48	□□□□□ -2.33
snR50	snR50	RIM4	P38741	713 aa		0.48	□□□□□ -2.33
snR50	snR50	MIP6	P38760	659 aa	Known RBP	0.48	□□□□□ -2.33
snR50	snR50	EXO1	P39875	702 aa		0.48	□□□□□ -2.33
snR50	snR50	YEL068C	P39977	110 aa		0.48	□□□□□ -2.33
snR50	snR50	FYV10	P40492	516 aa		0.48	□□□□□ -2.33
snR50	snR50	YIR016W	P40572	265 aa		0.48	□□□□□ -2.33
snR50	snR50	THI6	P41835	540 aa		0.48	□□□□□ -2.33
snR50	snR50	RSC8	P43609	557 aa	Known RBP	0.48	□□□□□ -2.33
snR50	snR50	IRC7	P43623	340 aa		0.48	□□□□□ -2.33
snR50	snR50	ZDS1	P50111	915 aa	Known RBP	0.48	□□□□□ -2.33
snR50	snR50	COQ6	P53318	479 aa		0.48	□□□□□ -2.33
snR50	snR50	DIP5	P53388	608 aa		0.48	□□□□□ -2.33
snR50	snR50	ORC4	P54791	529 aa		0.48	□□□□□ -2.33
snR50	snR50	LRS4	Q04087	347 aa	Known RBP	0.48	□□□□□ -2.33
snR50	snR50	IZH3	Q07959	543 aa		0.48	□□□□□ -2.33
snR50	snR50	TLG2	Q08144	397 aa		0.48	□□□□□ -2.33
snR50	snR50	YFL068W	P0CX99	160 aa		0.47	□□□□□ -2.33
snR50	snR50	YLL066W-A	P0CY00	160 aa		0.47	□□□□□ -2.33
snR50	snR50	YLL067W-A	P0CY01	160 aa		0.47	□□□□□ -2.33
snR50	snR50	WHI2	P12611	486 aa		0.47	□□□□□ -2.33
snR50	snR50	ACO1	P19414	778 aa	Known RBP RIP-Chip data	0.47	□□□□□ -2.33	not detected
snR50	snR50	PRP9	P19736	530 aa	Known RBP	0.47	□□□□□ -2.33
snR50	snR50	SAN1	P22470	610 aa		0.47	□□□□□ -2.33
snR50	snR50	FEN2	P25621	512 aa	Known RBP	0.47	□□□□□ -2.33
snR50	snR50	CPR3	P25719	182 aa		0.47	□□□□□ -2.33
snR50	snR50	PET10	P36139	283 aa		0.47	□□□□□ -2.33
snR50	snR50	GND1	P38720	489 aa	Known RBP	0.47	□□□□□ -2.33
snR50	snR50	TDA10	P42938	290 aa		0.47	□□□□□ -2.33
snR50	snR50	SAD1	P43589	448 aa		0.47	□□□□□ -2.33
snR50	snR50	YJL043W	P47053	257 aa		0.47	□□□□□ -2.33
snR50	snR50	YGR283C	P53336	341 aa	Predicted RBP	0.47	□□□□□ -2.33
snR50	snR50	YNL018C	P53976	612 aa		0.47	□□□□□ -2.33
snR50	snR50	STP4	Q07351	490 aa		0.47	□□□□□ -2.33
snR50	snR50	YDL073W	Q07454	984 aa		0.47	□□□□□ -2.33
snR50	snR50	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	0.47	□□□□□ -2.33	not detected
snR50	snR50	CET1	O13297	549 aa	Predicted RBP	0.46	□□□□□ -2.34
snR50	snR50	DIF1	O13577	133 aa		0.46	□□□□□ -2.34
snR50	snR50	CDC23	P16522	626 aa		0.46	□□□□□ -2.34
snR50	snR50	COQ3	P27680	312 aa		0.46	□□□□□ -2.34
snR50	snR50	SWH1	P35845	1188 aa		0.46	□□□□□ -2.34
snR50	snR50	YBR184W	P38299	523 aa		0.46	□□□□□ -2.34
snR50	snR50	IPL1	P38991	367 aa		0.46	□□□□□ -2.34

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