RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W YEN1P40028 759 aa2.01□□□□□ -2.09
CTF4YPR135W RNT1Q02555 471 aa2.01□□□□□ -2.09
CTF4YPR135W VPS64Q03944 604 aa2.01□□□□□ -2.09
CTF4YPR135W SPO20Q04359 397 aa2.01□□□□□ -2.09
CTF4YPR135W MDM38Q08179 573 aa2.01□□□□□ -2.09
CTF4YPR135W CCH1P50077 2039 aa2.01□□□□□ -2.09
CTF4YPR135W ALG7P07286 448 aa2.01□□□□□ -2.09
CTF4YPR135W VMA2P16140 517 aaKnown RBP2.01□□□□□ -2.09
CTF4YPR135W MBR1P23493 339 aa2.01□□□□□ -2.09
CTF4YPR135W DUT1P33317 147 aa2.01□□□□□ -2.09
CTF4YPR135W TIF4631P39935 952 aaKnown RBP2.01□□□□□ -2.09
CTF4YPR135W NUP82P40368 713 aa2.01□□□□□ -2.09
CTF4YPR135W SRT1Q03175 343 aa2.01□□□□□ -2.09
CTF4YPR135W SGO1Q08490 590 aa2.01□□□□□ -2.09
CTF4YPR135W NDJ1Q12366 352 aa2.01□□□□□ -2.09
CTF4YPR135W RTP1Q12751 981 aa2.01□□□□□ -2.09
CTF4YPR135W PPR1P07272 904 aaPredicted RBP2□□□□□ -2.09
CTF4YPR135W TRP4P07285 380 aaPredicted RBP2□□□□□ -2.09
CTF4YPR135W BET2P20133 325 aa2□□□□□ -2.09
CTF4YPR135W FUI1P38196 639 aa2□□□□□ -2.09
CTF4YPR135W YBL028CP38202 106 aa2□□□□□ -2.09
CTF4YPR135W GIC1P38785 314 aa2□□□□□ -2.09
CTF4YPR135W YFH7P43591 353 aa2□□□□□ -2.09
CTF4YPR135W FAA4P47912 694 aaKnown RBP2□□□□□ -2.09
CTF4YPR135W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
CTF4YPR135W LCD1Q04377 747 aa2□□□□□ -2.09
CTF4YPR135W YDL121CQ07541 149 aa2□□□□□ -2.09
CTF4YPR135W GUP2Q08929 609 aa2□□□□□ -2.09
CTF4YPR135W YPL066WQ12194 479 aa2□□□□□ -2.09
CTF4YPR135W MET6P05694 767 aaKnown RBP2□□□□□ -2.09
CTF4YPR135W ERR1P0CX10 437 aa2□□□□□ -2.09
CTF4YPR135W ERR2P0CX11 437 aa2□□□□□ -2.09
CTF4YPR135W INO1P11986 533 aa2□□□□□ -2.09
CTF4YPR135W MDM10P18409 493 aa2□□□□□ -2.09
CTF4YPR135W CDC11P32458 415 aa2□□□□□ -2.09
CTF4YPR135W SEC6P32844 805 aa2□□□□□ -2.09
CTF4YPR135W SGM1P47166 707 aa2□□□□□ -2.09
CTF4YPR135W FOL1P53848 824 aa2□□□□□ -2.09
CTF4YPR135W RTT10Q08924 1013 aa2□□□□□ -2.09
CTF4YPR135W PCL8Q08966 492 aa2□□□□□ -2.09
CTF4YPR135W YGR161W-CQ3E744 92 aa2□□□□□ -2.09
CTF4YPR135W SUP35P05453 685 aaKnown RBP1.99□□□□□ -2.09
CTF4YPR135W SNF3P10870 884 aa1.99□□□□□ -2.09
CTF4YPR135W GAL11P19659 1081 aa1.99□□□□□ -2.09
CTF4YPR135W PRI2P20457 528 aa1.99□□□□□ -2.09
CTF4YPR135W TOM71P38825 639 aaKnown RBP1.99□□□□□ -2.09
CTF4YPR135W NPP2P39997 493 aa1.99□□□□□ -2.09
CTF4YPR135W SKY1Q03656 742 aa1.99□□□□□ -2.09
CTF4YPR135W AFT2Q08957 416 aa1.99□□□□□ -2.09
CTF4YPR135W UPC2Q12151 913 aa1.99□□□□□ -2.09
CTF4YPR135W LAM4P38800 1345 aa1.99□□□□□ -2.09
CTF4YPR135W POX1P13711 748 aa1.99□□□□□ -2.09
CTF4YPR135W PUP3P25451 205 aaKnown RBP1.99□□□□□ -2.09
CTF4YPR135W FUN30P31380 1131 aa1.99□□□□□ -2.09
CTF4YPR135W SDS3P40505 327 aa1.99□□□□□ -2.09
CTF4YPR135W SCS3P53012 380 aa1.99□□□□□ -2.09
CTF4YPR135W PEX8P53248 589 aa1.99□□□□□ -2.09
CTF4YPR135W SFB2P53953 876 aa1.99□□□□□ -2.09
CTF4YPR135W BUL2Q03758 920 aaKnown RBP1.99□□□□□ -2.09
CTF4YPR135W GUD1Q07729 489 aa1.99□□□□□ -2.09
CTF4YPR135W RPP0P05317 312 aaKnown RBP1.98□□□□□ -2.09
CTF4YPR135W LYP1P32487 611 aa1.98□□□□□ -2.09
CTF4YPR135W STE5P32917 917 aa1.98□□□□□ -2.09
CTF4YPR135W PPZ2P33329 710 aa1.98□□□□□ -2.09
CTF4YPR135W ATG19P35193 415 aa1.98□□□□□ -2.09
CTF4YPR135W SPF1P39986 1215 aaKnown RBP1.98□□□□□ -2.09
CTF4YPR135W YGL176CP46945 554 aa1.98□□□□□ -2.09
CTF4YPR135W YGR053CP53234 283 aa1.98□□□□□ -2.09
CTF4YPR135W YGR125WP53273 1036 aa1.98□□□□□ -2.09
CTF4YPR135W GDE1Q02979 1223 aa1.98□□□□□ -2.09
CTF4YPR135W PKH1Q03407 766 aa1.98□□□□□ -2.09
CTF4YPR135W YML037CQ03703 340 aa1.98□□□□□ -2.09
CTF4YPR135W GYL1Q04322 720 aa1.98□□□□□ -2.09
CTF4YPR135W HCR1Q05775 265 aaKnown RBP1.98□□□□□ -2.09
CTF4YPR135W BRE1Q07457 700 aaKnown RBP1.98□□□□□ -2.09
CTF4YPR135W FAL1Q12099 399 aaKnown RBP1.98□□□□□ -2.09
CTF4YPR135W MRH1Q12117 320 aaPredicted RBP1.98□□□□□ -2.09
CTF4YPR135W MSB2P32334 1306 aa1.98□□□□□ -2.09
CTF4YPR135W PHO8P11491 566 aa1.98□□□□□ -2.09
CTF4YPR135W CDC34P14682 295 aa1.98□□□□□ -2.09
CTF4YPR135W SED4P25365 1065 aa1.98□□□□□ -2.09
CTF4YPR135W PPS1P38148 807 aa1.98□□□□□ -2.09
CTF4YPR135W TVP23P38962 199 aa1.98□□□□□ -2.09
CTF4YPR135W NAB3P38996 802 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
CTF4YPR135W SAH1P39954 449 aaKnown RBP1.98□□□□□ -2.09
CTF4YPR135W YJR120WP47157 116 aa1.98□□□□□ -2.09
CTF4YPR135W SLU7Q02775 382 aaKnown RBP1.98□□□□□ -2.09
CTF4YPR135W NAN1Q02931 896 aaKnown RBP1.98□□□□□ -2.09
CTF4YPR135W YML053CQ04978 212 aa1.98□□□□□ -2.09
CTF4YPR135W PIG1Q06216 648 aa1.98□□□□□ -2.09
CTF4YPR135W TDA5Q06417 326 aaKnown RBP1.98□□□□□ -2.09
CTF4YPR135W HBT1Q07653 1046 aaKnown RBP1.98□□□□□ -2.09
CTF4YPR135W MSL5Q12186 476 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
CTF4YPR135W RIF1P29539 1916 aa1.98□□□□□ -2.09
CTF4YPR135W PIF1P07271 859 aa1.98□□□□□ -2.09
CTF4YPR135W MPE1P35728 441 aaKnown RBP1.98□□□□□ -2.09
CTF4YPR135W YPT35P38815 214 aaKnown RBP1.98□□□□□ -2.09
CTF4YPR135W CRP1P38845 465 aaKnown RBP1.98□□□□□ -2.09
CTF4YPR135W OPT1P40897 799 aa1.98□□□□□ -2.09
CTF4YPR135W NOP2P40991 618 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms