RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	MCM21	Q06675	368 aa		3.64	□□□□□ -1.83
HAA1	YPR008W	MLH3	Q12083	715 aa		3.64	□□□□□ -1.83
HAA1	YPR008W	BNR1	P40450	1375 aa		3.64	□□□□□ -1.83
HAA1	YPR008W	TRM3	Q07527	1436 aa		3.64	□□□□□ -1.83
HAA1	YPR008W	RNR1	P21524	888 aa	Known RBP	3.64	□□□□□ -1.83
HAA1	YPR008W	CCR4	P31384	837 aa	Known RBP	3.64	□□□□□ -1.83
HAA1	YPR008W	MVD1	P32377	396 aa	Known RBP	3.64	□□□□□ -1.83
HAA1	YPR008W	TDP1	P38319	544 aa		3.64	□□□□□ -1.83
HAA1	YPR008W	RNH70	P53331	553 aa		3.64	□□□□□ -1.83
HAA1	YPR008W	SMX3	P54999	86 aa	Predicted RBP	3.64	□□□□□ -1.83
HAA1	YPR008W	YPT53	P36019	220 aa		3.63	□□□□□ -1.83
HAA1	YPR008W	CBR1	P38626	284 aa	Known RBP	3.63	□□□□□ -1.83
HAA1	YPR008W	STU2	P46675	888 aa		3.63	□□□□□ -1.83
HAA1	YPR008W	MET13	P53128	600 aa		3.63	□□□□□ -1.83
HAA1	YPR008W	VPS73	P53142	486 aa	Known RBP	3.63	□□□□□ -1.83
HAA1	YPR008W	ALG12	P53730	551 aa		3.63	□□□□□ -1.83
HAA1	YPR008W	CTK1	Q03957	528 aa	Known RBP	3.63	□□□□□ -1.83
HAA1	YPR008W	DCS2	Q12123	353 aa		3.63	□□□□□ -1.83
HAA1	YPR008W	YKL033W-A	Q86ZR7	236 aa		3.63	□□□□□ -1.83
HAA1	YPR008W	BNI1	P41832	1953 aa		3.63	□□□□□ -1.83
HAA1	YPR008W	PHO11	P35842	467 aa		3.63	□□□□□ -1.83
HAA1	YPR008W	TRZ1	P36159	838 aa	Predicted RBP	3.63	□□□□□ -1.83
HAA1	YPR008W	PHO12	P38693	467 aa		3.63	□□□□□ -1.83
HAA1	YPR008W	NOP9	P47077	666 aa	Known RBP	3.63	□□□□□ -1.83
HAA1	YPR008W	TAH11	P47112	604 aa		3.63	□□□□□ -1.83
HAA1	YPR008W	FHN1	P53279	174 aa		3.63	□□□□□ -1.83
HAA1	YPR008W	SSL2	Q00578	843 aa		3.63	□□□□□ -1.83
HAA1	YPR008W	TFB2	Q02939	513 aa		3.63	□□□□□ -1.83
HAA1	YPR008W	ECM3	Q99252	613 aa		3.63	□□□□□ -1.83
HAA1	YPR008W	GIN4	Q12263	1142 aa		3.62	□□□□□ -1.83
HAA1	YPR008W	SEC7	P11075	2009 aa	Known RBP	3.61	□□□□□ -1.83
HAA1	YPR008W	PYC1	P11154	1178 aa	Known RBP	3.61	□□□□□ -1.83
HAA1	YPR008W	EMP70	P32802	667 aa		3.61	□□□□□ -1.83
HAA1	YPR008W	SSZ1	P38788	538 aa	Known RBP	3.61	□□□□□ -1.83
HAA1	YPR008W	REV7	P38927	245 aa		3.61	□□□□□ -1.83
HAA1	YPR008W	OSW7	P43611	510 aa		3.61	□□□□□ -1.83
HAA1	YPR008W	YNL193W	P53870	558 aa		3.61	□□□□□ -1.83
HAA1	YPR008W	DOP1	Q03921	1698 aa		3.61	□□□□□ -1.83
HAA1	YPR008W	POB3	Q04636	552 aa	Known RBP	3.61	□□□□□ -1.83
HAA1	YPR008W	FPR4	Q06205	392 aa	Predicted RBP	3.61	□□□□□ -1.83
HAA1	YPR008W	GCN2	P15442	1659 aa		3.61	□□□□□ -1.83
HAA1	YPR008W	RPL8A	P17076	256 aa	Known RBP	3.6	□□□□□ -1.83
HAA1	YPR008W	KIN3	P22209	435 aa		3.6	□□□□□ -1.83
HAA1	YPR008W	YEL1	P34225	687 aa		3.6	□□□□□ -1.83
HAA1	YPR008W	FLO10	P36170	1169 aa		3.6	□□□□□ -1.83
HAA1	YPR008W	AKL1	P38080	1108 aa	Known RBP	3.6	□□□□□ -1.83
HAA1	YPR008W	NUG1	P40010	520 aa	Known RBP	3.6	□□□□□ -1.83
HAA1	YPR008W	DOT6	P40059	670 aa	Known RBP	3.6	□□□□□ -1.83
HAA1	YPR008W	SET2	P46995	733 aa	Known RBP	3.6	□□□□□ -1.83
HAA1	YPR008W	REC102	Q02721	264 aa		3.6	□□□□□ -1.83
HAA1	YPR008W	YML122C	Q03207	126 aa		3.6	□□□□□ -1.83
HAA1	YPR008W	TAF3	Q12297	353 aa		3.6	□□□□□ -1.83
HAA1	YPR008W	THR1	P17423	357 aa	Known RBP	3.59	□□□□□ -1.83
HAA1	YPR008W	PEX1	P24004	1043 aa		3.59	□□□□□ -1.83
HAA1	YPR008W	SET3	P36124	751 aa		3.59	□□□□□ -1.83
HAA1	YPR008W	NDC80	P40460	691 aa		3.59	□□□□□ -1.83
HAA1	YPR008W	COX18	P53239	316 aa		3.59	□□□□□ -1.83
HAA1	YPR008W	THI22	Q06490	572 aa		3.59	□□□□□ -1.83
HAA1	YPR008W	CHC1	P22137	1653 aa	Known RBP	3.59	□□□□□ -1.83
HAA1	YPR008W	RRP14	P36080	434 aa	Known RBP	3.59	□□□□□ -1.83
HAA1	YPR008W	YJL206C	P39529	758 aa		3.59	□□□□□ -1.83
HAA1	YPR008W	RSC8	P43609	557 aa	Known RBP	3.59	□□□□□ -1.83
HAA1	YPR008W	YJR039W	P47107	1121 aa		3.59	□□□□□ -1.83
HAA1	YPR008W	VPS36	Q06696	566 aa		3.59	□□□□□ -1.83
HAA1	YPR008W	ZRT2	Q12436	422 aa		3.59	□□□□□ -1.83
HAA1	YPR008W	PEX2	P32800	271 aa		3.58	□□□□□ -1.84
HAA1	YPR008W	PPG1	P32838	368 aa		3.58	□□□□□ -1.84
HAA1	YPR008W	BCS1	P32839	456 aa		3.58	□□□□□ -1.84
HAA1	YPR008W	SEC6	P32844	805 aa		3.58	□□□□□ -1.84
HAA1	YPR008W	YPT7	P32939	208 aa		3.58	□□□□□ -1.84
HAA1	YPR008W	APT2	P36973	181 aa		3.58	□□□□□ -1.84
HAA1	YPR008W	CRP1	P38845	465 aa	Known RBP	3.58	□□□□□ -1.84
HAA1	YPR008W	YHR202W	P38887	602 aa		3.58	□□□□□ -1.84
HAA1	YPR008W	MGS1	P40151	587 aa		3.58	□□□□□ -1.84
HAA1	YPR008W	ATF1	P40353	525 aa		3.58	□□□□□ -1.84
HAA1	YPR008W	YAP1802	P53309	568 aa		3.58	□□□□□ -1.84
HAA1	YPR008W	ORC1	P54784	914 aa	Predicted RBP	3.58	□□□□□ -1.84
HAA1	YPR008W	DNM1	P54861	757 aa		3.58	□□□□□ -1.84
HAA1	YPR008W	LGE1	Q02796	332 aa	Known RBP	3.58	□□□□□ -1.84
HAA1	YPR008W	ISA1	Q07821	250 aa	Predicted RBP	3.58	□□□□□ -1.84
HAA1	YPR008W	USV1	Q12132	391 aa		3.58	□□□□□ -1.84
HAA1	YPR008W	APN2	P38207	520 aa		3.58	□□□□□ -1.84
HAA1	YPR008W	COG8	Q04632	607 aa		3.58	□□□□□ -1.84
HAA1	YPR008W	NOP14	Q99207	810 aa	Known RBP	3.58	□□□□□ -1.84
HAA1	YPR008W	PDR5	P33302	1511 aa	Known RBP	3.58	□□□□□ -1.84
HAA1	YPR008W	RCR2	Q03446	210 aa	Known RBP	3.57	□□□□□ -1.84
HAA1	YPR008W	YOR093C	Q12275	1648 aa		3.57	□□□□□ -1.84
HAA1	YPR008W	GFA1	P14742	717 aa	Known RBP	3.56	□□□□□ -1.84
HAA1	YPR008W	PPZ2	P33329	710 aa		3.56	□□□□□ -1.84
HAA1	YPR008W	RIX1	P38883	763 aa	Predicted RBP	3.56	□□□□□ -1.84
HAA1	YPR008W	BEM4	P39011	633 aa		3.56	□□□□□ -1.84
HAA1	YPR008W	MNN1	P39106	762 aa		3.56	□□□□□ -1.84
HAA1	YPR008W	GUD1	Q07729	489 aa		3.56	□□□□□ -1.84
HAA1	YPR008W	CDC43	P18898	376 aa		3.56	□□□□□ -1.84
HAA1	YPR008W	MSS1	P32559	526 aa	Predicted RBP	3.56	□□□□□ -1.84
HAA1	YPR008W	BIT2	P38346	545 aa		3.56	□□□□□ -1.84
HAA1	YPR008W	PAF1	P38351	445 aa		3.56	□□□□□ -1.84
HAA1	YPR008W	YHR097C	P38809	366 aa	Known RBP	3.56	□□□□□ -1.84
HAA1	YPR008W	ATG4	P53867	494 aa		3.56	□□□□□ -1.84
HAA1	YPR008W	PDR11	P40550	1411 aa		3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms