RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	SFA1	P32771	386 aa		7.4	□□□□□ -1.23
MSB3	YNL293W	ABZ1	P37254	787 aa	Predicted RBP	7.4	□□□□□ -1.23
MSB3	YNL293W	MTG2	P38860	518 aa		7.4	□□□□□ -1.23
MSB3	YNL293W	CAB2	P40506	365 aa		7.4	□□□□□ -1.23
MSB3	YNL293W	YAF9	P53930	226 aa		7.4	□□□□□ -1.23
MSB3	YNL293W	GTB1	Q04924	702 aa		7.4	□□□□□ -1.23
MSB3	YNL293W	ADY3	Q07732	790 aa		7.4	□□□□□ -1.23
MSB3	YNL293W	BAG7	Q12128	409 aa		7.4	□□□□□ -1.23
MSB3	YNL293W	MDS3	P53094	1487 aa		7.4	□□□□□ -1.23
MSB3	YNL293W	BAS1	P22035	811 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	GSY1	P23337	708 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	RAM2	P29703	316 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	PEX6	P33760	1030 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	RCK2	P38623	610 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	CTM1	P38818	585 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	SIP5	P40210	489 aa	Known RBP	7.39	□□□□□ -1.23
MSB3	YNL293W	FKH1	P40466	484 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	CTF18	P49956	741 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	CGR1	P53188	120 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	SUB2	Q07478	446 aa	Known RBP	7.39	□□□□□ -1.23
MSB3	YNL293W	MNL2	Q12205	849 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	RUP1	Q12242	671 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	EMP46	Q12396	444 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-H	O13535	1793 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-DR5	P0C2I2	1755 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-DR6	P0C2I3	1755 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-LR2	P0C2I5	1755 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-PR2	P0C2J0	1756 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-JR1	P47098	1755 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-ML2	Q03434	1755 aa	Known RBP	7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-ER1	Q03612	1755 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-ML1	Q04711	1755 aa	Known RBP	7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-GR2	Q12269	1755 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-OL	Q12273	1755 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	TY1B-PL	Q12414	1755 aa	Known RBP	7.39	□□□□□ -1.23
MSB3	YNL293W	CHC1	P22137	1653 aa	Known RBP	7.39	□□□□□ -1.23
MSB3	YNL293W	RPL24A	P04449	155 aa	Known RBP	7.39	□□□□□ -1.23
MSB3	YNL293W	UTP8	P53276	713 aa	Known RBP	7.39	□□□□□ -1.23
MSB3	YNL293W	RMI1	Q02685	241 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	GPI17	Q04080	534 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	VPS54	Q12071	889 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	DCS2	Q12123	353 aa		7.39	□□□□□ -1.23
MSB3	YNL293W	HO	P09932	586 aa		7.38	□□□□□ -1.23
MSB3	YNL293W	HSP60	P19882	572 aa	Known RBP	7.38	□□□□□ -1.23
MSB3	YNL293W	PRP5	P21372	849 aa	Predicted RBP	7.38	□□□□□ -1.23
MSB3	YNL293W	YCR051W	P25631	222 aa		7.38	□□□□□ -1.23
MSB3	YNL293W	PRR1	P28708	518 aa		7.38	□□□□□ -1.23
MSB3	YNL293W	AST1	P35183	429 aa		7.38	□□□□□ -1.23
MSB3	YNL293W	LAS1	P36146	502 aa	Predicted RBP	7.38	□□□□□ -1.23
MSB3	YNL293W	PAM1	P37304	830 aa	Known RBP	7.38	□□□□□ -1.23
MSB3	YNL293W	ALG3	P38179	458 aa		7.38	□□□□□ -1.23
MSB3	YNL293W	RTS2	P40962	232 aa		7.38	□□□□□ -1.23
MSB3	YNL293W	FOX2	Q02207	900 aa	Known RBP	7.38	□□□□□ -1.23
MSB3	YNL293W	YMR114C	Q04471	368 aa	Known RBP	7.38	□□□□□ -1.23
MSB3	YNL293W	PIG1	Q06216	648 aa		7.38	□□□□□ -1.23
MSB3	YNL293W	RTR2	Q12378	196 aa		7.38	□□□□□ -1.23
MSB3	YNL293W	YLR278C	Q05854	1341 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	ADE8	P04161	214 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	RDS2	P19541	446 aa	Known RBP	7.37	□□□□□ -1.23
MSB3	YNL293W	PTC3	P34221	468 aa	Known RBP	7.37	□□□□□ -1.23
MSB3	YNL293W	MDJ1	P35191	511 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	LRG1	P35688	1017 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	YHR112C	P38716	378 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	VPS29	P38759	282 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	YNG2	P38806	282 aa	Known RBP	7.37	□□□□□ -1.23
MSB3	YNL293W	ALD5	P40047	520 aa	Known RBP	7.37	□□□□□ -1.23
MSB3	YNL293W	SEC28	P40509	296 aa	Known RBP	7.37	□□□□□ -1.23
MSB3	YNL293W	YIL055C	P40523	627 aa	Known RBP	7.37	□□□□□ -1.23
MSB3	YNL293W	TED1	P40533	473 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	BUD6	P41697	788 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	TDA10	P42938	290 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	VAC7	P53950	1165 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	MAK10	Q02197	733 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	BUD22	Q04347	519 aa	Known RBP	7.37	□□□□□ -1.23
MSB3	YNL293W	FMP42	Q04991	504 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	YLL007C	Q07799	665 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	PUS7	Q08647	676 aa	Known RBP	7.37	□□□□□ -1.23
MSB3	YNL293W	HUA2	Q12134	243 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	YPR022C	Q12139	1133 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	MPH2	P0CD99	609 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	STE12	P13574	688 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	SPS22	P25380	463 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	AAD3	P25612	363 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	DAL80	P26343	269 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	BCH2	P36122	765 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	ECM31	P38122	312 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	KAP104	P38217	918 aa	Known RBP	7.37	□□□□□ -1.23
MSB3	YNL293W	RFS1	P38234	210 aa	Known RBP	7.37	□□□□□ -1.23
MSB3	YNL293W	ALG14	P38242	237 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	MSR1	P38714	643 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	EMP65	P40085	556 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	EFM4	P40516	257 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	CKB1	P43639	278 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	TBF1	Q02457	562 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	TMA46	Q12000	345 aa	Known RBP	7.37	□□□□□ -1.23
MSB3	YNL293W	YOS9	Q99220	542 aa		7.37	□□□□□ -1.23
MSB3	YNL293W	RRP5	Q05022	1729 aa	Known RBP	7.36	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms