RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCM1	YNL022C	IML2	P47031	731 aa		4.99	□□□□□ -1.61
RCM1	YNL022C	BFA1	P47113	574 aa		4.99	□□□□□ -1.61
RCM1	YNL022C	SNO2	P53823	222 aa		4.99	□□□□□ -1.61
RCM1	YNL022C	PTA1	Q01329	785 aa	Predicted RBP	4.99	□□□□□ -1.61
RCM1	YNL022C	CTF4	Q01454	927 aa		4.99	□□□□□ -1.61
RCM1	YNL022C	RIM15	P43565	1770 aa		4.98	□□□□□ -1.61
RCM1	YNL022C	CYC1	P00044	109 aa	Predicted RBP	4.98	□□□□□ -1.61
RCM1	YNL022C	CMP2	P14747	604 aa		4.98	□□□□□ -1.61
RCM1	YNL022C	HCA4	P20448	770 aa	Known RBP	4.98	□□□□□ -1.61
RCM1	YNL022C	DBF20	P32328	564 aa		4.98	□□□□□ -1.61
RCM1	YNL022C	YKU70	P32807	602 aa		4.98	□□□□□ -1.61
RCM1	YNL022C	SRP101	P32916	621 aa		4.98	□□□□□ -1.61
RCM1	YNL022C	SAP190	P36123	1033 aa		4.98	□□□□□ -1.61
RCM1	YNL022C	KTR4	P38131	464 aa		4.98	□□□□□ -1.61
RCM1	YNL022C	SHR5	P41912	237 aa		4.98	□□□□□ -1.61
RCM1	YNL022C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
RCM1	YNL022C	ADE16	P54113	591 aa	Known RBP	4.98	□□□□□ -1.61
RCM1	YNL022C	MDM1	Q01846	1127 aa		4.98	□□□□□ -1.61
RCM1	YNL022C	YML131W	Q03102	365 aa		4.98	□□□□□ -1.61
RCM1	YNL022C	SKY1	Q03656	742 aa		4.98	□□□□□ -1.61
RCM1	YNL022C	YHM2	Q04013	314 aa		4.98	□□□□□ -1.61
RCM1	YNL022C	CDA1	Q06702	301 aa		4.98	□□□□□ -1.61
RCM1	YNL022C	PEX15	Q08215	383 aa		4.98	□□□□□ -1.61
RCM1	YNL022C	BMS1	Q08965	1183 aa	Known RBP	4.98	□□□□□ -1.61
RCM1	YNL022C	HEM12	P32347	362 aa	Predicted RBP	4.97	□□□□□ -1.61
RCM1	YNL022C	MND2	P40577	368 aa		4.97	□□□□□ -1.61
RCM1	YNL022C	UBA2	P52488	636 aa		4.97	□□□□□ -1.61
RCM1	YNL022C	TAD1	P53065	400 aa		4.97	□□□□□ -1.61
RCM1	YNL022C	ECM9	Q02202	377 aa		4.97	□□□□□ -1.61
RCM1	YNL022C	YKR011C	Q02209	353 aa		4.97	□□□□□ -1.61
RCM1	YNL022C	YDR338C	Q05497	695 aa		4.97	□□□□□ -1.61
RCM1	YNL022C	ERP4	Q12450	207 aa		4.97	□□□□□ -1.61
RCM1	YNL022C	EDE1	P34216	1381 aa		4.97	□□□□□ -1.61
RCM1	YNL022C	DIF1	O13577	133 aa		4.96	□□□□□ -1.62
RCM1	YNL022C	APA1	P16550	321 aa	Known RBP	4.96	□□□□□ -1.62
RCM1	YNL022C	DAL7	P21826	554 aa		4.96	□□□□□ -1.62
RCM1	YNL022C	BLI1	P35727	113 aa		4.96	□□□□□ -1.62
RCM1	YNL022C	OMA1	P36163	345 aa		4.96	□□□□□ -1.62
RCM1	YNL022C	ETP1	P38748	585 aa	Known RBP	4.96	□□□□□ -1.62
RCM1	YNL022C	CCT5	P40413	562 aa	Known RBP	4.96	□□□□□ -1.62
RCM1	YNL022C	CEP3	P40969	608 aa		4.96	□□□□□ -1.62
RCM1	YNL022C	UBC9	P50623	157 aa	Predicted RBP	4.96	□□□□□ -1.62
RCM1	YNL022C	YMR018W	Q04364	514 aa		4.96	□□□□□ -1.62
RCM1	YNL022C	IMH1	Q06704	911 aa	Known RBP	4.96	□□□□□ -1.62
RCM1	YNL022C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
RCM1	YNL022C	SPE1	P08432	466 aa		4.95	□□□□□ -1.62
RCM1	YNL022C	OSM1	P21375	501 aa	Known RBP	4.95	□□□□□ -1.62
RCM1	YNL022C	CCR4	P31384	837 aa	Known RBP	4.95	□□□□□ -1.62
RCM1	YNL022C	POA1	P38218	177 aa		4.95	□□□□□ -1.62
RCM1	YNL022C	SET5	P38890	526 aa	Known RBP	4.95	□□□□□ -1.62
RCM1	YNL022C	ACA1	P39970	489 aa		4.95	□□□□□ -1.62
RCM1	YNL022C	YFL052W	P43551	465 aa		4.95	□□□□□ -1.62
RCM1	YNL022C	BNA2	P47125	453 aa		4.95	□□□□□ -1.62
RCM1	YNL022C	RNR4	P49723	345 aa	Known RBP	4.95	□□□□□ -1.62
RCM1	YNL022C	INP52	P50942	1183 aa		4.95	□□□□□ -1.62
RCM1	YNL022C	NPY1	P53164	384 aa		4.95	□□□□□ -1.62
RCM1	YNL022C	PUS2	P53167	370 aa		4.95	□□□□□ -1.62
RCM1	YNL022C	SGD1	Q06132	899 aa		4.95	□□□□□ -1.62
RCM1	YNL022C	ALE1	Q08548	619 aa		4.95	□□□□□ -1.62
RCM1	YNL022C	LYS2	P07702	1392 aa		4.95	□□□□□ -1.62
RCM1	YNL022C	GAL10	P04397	699 aa		4.94	□□□□□ -1.62
RCM1	YNL022C	RRP8	P38961	392 aa	Known RBP	4.94	□□□□□ -1.62
RCM1	YNL022C	RLP7	P40693	322 aa	Known RBP	4.94	□□□□□ -1.62
RCM1	YNL022C	ECL1	P48235	211 aa		4.94	□□□□□ -1.62
RCM1	YNL022C	MEH1	Q02205	184 aa		4.94	□□□□□ -1.62
RCM1	YNL022C	CSI1	Q04368	295 aa		4.94	□□□□□ -1.62
RCM1	YNL022C	CRR1	Q05790	422 aa		4.94	□□□□□ -1.62
RCM1	YNL022C	YPL277C	Q08989	487 aa		4.94	□□□□□ -1.62
RCM1	YNL022C	RRI2	Q12348	645 aa		4.94	□□□□□ -1.62
RCM1	YNL022C	DFG16	Q99234	619 aa		4.94	□□□□□ -1.62
RCM1	YNL022C	CHS3	P29465	1165 aa		4.94	□□□□□ -1.62
RCM1	YNL022C	CYS3	P31373	394 aa	Known RBP	4.94	□□□□□ -1.62
RCM1	YNL022C	RAD24	P32641	659 aa		4.94	□□□□□ -1.62
RCM1	YNL022C	POL12	P38121	705 aa	Predicted RBP	4.94	□□□□□ -1.62
RCM1	YNL022C	DOT5	P40553	215 aa		4.94	□□□□□ -1.62
RCM1	YNL022C	CTH1	P47976	325 aa		4.94	□□□□□ -1.62
RCM1	YNL022C	ZDS2	P54786	942 aa		4.94	□□□□□ -1.62
RCM1	YNL022C	ECM38	Q05902	660 aa	Predicted RBP	4.94	□□□□□ -1.62
RCM1	YNL022C	YDL177C	Q12257	170 aa		4.94	□□□□□ -1.62
RCM1	YNL022C	ROM2	P51862	1356 aa	Known RBP	4.93	□□□□□ -1.62
RCM1	YNL022C	PRC1	P00729	532 aa		4.93	□□□□□ -1.62
RCM1	YNL022C	MAC1	P35192	417 aa		4.93	□□□□□ -1.62
RCM1	YNL022C	TMA108	P40462	946 aa		4.93	□□□□□ -1.62
RCM1	YNL022C	MNT3	P40549	630 aa		4.93	□□□□□ -1.62
RCM1	YNL022C	HOL1	P53389	586 aa		4.93	□□□□□ -1.62
RCM1	YNL022C	HDA1	P53973	706 aa		4.93	□□□□□ -1.62
RCM1	YNL022C	LRS4	Q04087	347 aa	Known RBP	4.93	□□□□□ -1.62
RCM1	YNL022C	ADY3	Q07732	790 aa		4.93	□□□□□ -1.62
RCM1	YNL022C	SSP2	Q08646	371 aa		4.93	□□□□□ -1.62
RCM1	YNL022C	NEW1	Q08972	1196 aa	Known RBP	4.93	□□□□□ -1.62
RCM1	YNL022C	YOL114C	Q12322	202 aa		4.93	□□□□□ -1.62
RCM1	YNL022C	YBR182C-A	Q8TGU6	64 aa		4.93	□□□□□ -1.62
RCM1	YNL022C	RPS19A	P07280	144 aa	Known RBP	4.92	□□□□□ -1.62
RCM1	YNL022C	RPS19B	P07281	144 aa	Predicted RBP	4.92	□□□□□ -1.62
RCM1	YNL022C	RPS21A	P0C0V8	87 aa	Known RBP	4.92	□□□□□ -1.62
RCM1	YNL022C	MRP7	P12687	371 aa		4.92	□□□□□ -1.62
RCM1	YNL022C	OPI1	P21957	404 aa		4.92	□□□□□ -1.62
RCM1	YNL022C	MSH1	P25846	959 aa		4.92	□□□□□ -1.62
RCM1	YNL022C	YNG2	P38806	282 aa	Known RBP	4.92	□□□□□ -1.62
RCM1	YNL022C	YIL108W	P40483	696 aa	Known RBP	4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms