RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeastyeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS34YLR240W YGR161W-CQ3E744 92 aa2.47□□□□□ -2.01
VPS34YLR240W CFT1Q06632 1357 aaKnown RBP2.46□□□□□ -2.02
VPS34YLR240W MNN4P36044 1178 aa2.46□□□□□ -2.02
VPS34YLR240W BCD1P38772 366 aa2.46□□□□□ -2.02
VPS34YLR240W SSZ1P38788 538 aaKnown RBP2.46□□□□□ -2.02
VPS34YLR240W DAS1P47005 663 aa2.46□□□□□ -2.02
VPS34YLR240W DCS2Q12123 353 aa2.46□□□□□ -2.02
VPS34YLR240W BNI1P41832 1953 aa2.46□□□□□ -2.02
VPS34YLR240W MHP1P43638 1398 aa2.46□□□□□ -2.02
VPS34YLR240W NUP192P47054 1683 aa2.46□□□□□ -2.02
VPS34YLR240W RTC1Q08281 1341 aa2.46□□□□□ -2.02
VPS34YLR240W TRZ1P36159 838 aaPredicted RBP2.46□□□□□ -2.02
VPS34YLR240W CCT3P39077 534 aaKnown RBP2.46□□□□□ -2.02
VPS34YLR240W FMP52P40008 231 aa2.46□□□□□ -2.02
VPS34YLR240W BRE5P53741 515 aaKnown RBP2.46□□□□□ -2.02
VPS34YLR240W REC102Q02721 264 aa2.46□□□□□ -2.02
VPS34YLR240W IRC13Q08630 104 aa2.46□□□□□ -2.02
VPS34YLR240W ACF2Q12168 779 aa2.46□□□□□ -2.02
VPS34YLR240W PPS1P38148 807 aa2.45□□□□□ -2.02
VPS34YLR240W YHL017WP38745 532 aa2.45□□□□□ -2.02
VPS34YLR240W LYS9P38999 446 aa2.45□□□□□ -2.02
VPS34YLR240W HLJ1P48353 224 aa2.45□□□□□ -2.02
VPS34YLR240W UBC11P52492 156 aa2.45□□□□□ -2.02
VPS34YLR240W TIM44Q01852 431 aa2.45□□□□□ -2.02
VPS34YLR240W LEE1Q02799 301 aaKnown RBP2.45□□□□□ -2.02
VPS34YLR240W MUK1Q02866 612 aa2.45□□□□□ -2.02
VPS34YLR240W CTK1Q03957 528 aaKnown RBP2.45□□□□□ -2.02
VPS34YLR240W MCH5Q08777 521 aa2.45□□□□□ -2.02
VPS34YLR240W HRP1Q99383 534 aaKnown RBP2.45□□□□□ -2.02
VPS34YLR240W TY1B-NL2Q99337 1749 aaKnown RBP2.45□□□□□ -2.02
VPS34YLR240W BRN1P38170 754 aa2.45□□□□□ -2.02
VPS34YLR240W FMO1P38866 432 aa2.45□□□□□ -2.02
VPS34YLR240W RET2P43621 546 aa2.45□□□□□ -2.02
VPS34YLR240W SET2P46995 733 aaKnown RBP2.45□□□□□ -2.02
VPS34YLR240W MTL1P53214 551 aa2.45□□□□□ -2.02
VPS34YLR240W RIA1P53893 1110 aa2.45□□□□□ -2.02
VPS34YLR240W THI73Q07904 523 aa2.45□□□□□ -2.02
VPS34YLR240W SGO1Q08490 590 aa2.45□□□□□ -2.02
VPS34YLR240W MLP1Q02455 1875 aaKnown RBP2.45□□□□□ -2.02
VPS34YLR240W DNF3Q12674 1656 aa2.44□□□□□ -2.02
VPS34YLR240W SIR3P06701 978 aa2.44□□□□□ -2.02
VPS34YLR240W RNR1P21524 888 aaKnown RBP2.44□□□□□ -2.02
VPS34YLR240W HIR1P32479 840 aa2.44□□□□□ -2.02
VPS34YLR240W MAL31P38156 614 aa2.44□□□□□ -2.02
VPS34YLR240W APN2P38207 520 aa2.44□□□□□ -2.02
VPS34YLR240W CKB2P38930 258 aa2.44□□□□□ -2.02
VPS34YLR240W YJR096WP47137 282 aa2.44□□□□□ -2.02
VPS34YLR240W PMT3P47190 753 aa2.44□□□□□ -2.02
VPS34YLR240W TEL2P53038 688 aa2.44□□□□□ -2.02
VPS34YLR240W YNR029CP53729 429 aaKnown RBP2.44□□□□□ -2.02
VPS34YLR240W YMR206WQ03695 313 aa2.44□□□□□ -2.02
VPS34YLR240W PYC1P11154 1178 aaKnown RBP2.44□□□□□ -2.02
VPS34YLR240W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
VPS34YLR240W AKL1P38080 1108 aaKnown RBP2.44□□□□□ -2.02
VPS34YLR240W NUP60P39705 539 aa2.44□□□□□ -2.02
VPS34YLR240W GET2P40056 285 aa2.44□□□□□ -2.02
VPS34YLR240W UME1Q03010 460 aa2.44□□□□□ -2.02
VPS34YLR240W IOC4Q04213 475 aa2.44□□□□□ -2.02
VPS34YLR240W NUP145P49687 1317 aa2.44□□□□□ -2.02
VPS34YLR240W ERG6P25087 383 aaKnown RBP2.43□□□□□ -2.02
VPS34YLR240W HIS7P33734 552 aaKnown RBP2.43□□□□□ -2.02
VPS34YLR240W ESL2P36168 1195 aa2.43□□□□□ -2.02
VPS34YLR240W ENP1P38333 483 aaKnown RBP2.43□□□□□ -2.02
VPS34YLR240W TDA3P38758 523 aa2.43□□□□□ -2.02
VPS34YLR240W CRP1P38845 465 aaKnown RBP2.43□□□□□ -2.02
VPS34YLR240W BEM4P39011 633 aa2.43□□□□□ -2.02
VPS34YLR240W NUG1P40010 520 aaKnown RBP2.43□□□□□ -2.02
VPS34YLR240W STB4P50104 949 aa2.43□□□□□ -2.02
VPS34YLR240W YGL081WP53156 320 aa2.43□□□□□ -2.02
VPS34YLR240W YAP1802P53309 568 aa2.43□□□□□ -2.02
VPS34YLR240W GPD1Q00055 391 aaKnown RBP2.43□□□□□ -2.02
VPS34YLR240W MTQ2Q03920 221 aaPredicted RBP2.43□□□□□ -2.02
VPS34YLR240W HBT1Q07653 1046 aaKnown RBP2.43□□□□□ -2.02
VPS34YLR240W YKL033W-AQ86ZR7 236 aa2.43□□□□□ -2.02
VPS34YLR240W MVD1P32377 396 aaKnown RBP2.43□□□□□ -2.02
VPS34YLR240W PRP19P32523 503 aaKnown RBP2.43□□□□□ -2.02
VPS34YLR240W TYS1P36421 394 aaKnown RBP2.43□□□□□ -2.02
VPS34YLR240W REV7P38927 245 aa2.43□□□□□ -2.02
VPS34YLR240W SDS3P40505 327 aa2.43□□□□□ -2.02
VPS34YLR240W NOP9P47077 666 aaKnown RBP2.43□□□□□ -2.02
VPS34YLR240W GPG1P53130 126 aa2.43□□□□□ -2.02
VPS34YLR240W YHR202WP38887 602 aa2.42□□□□□ -2.02
VPS34YLR240W HRB1P38922 454 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
VPS34YLR240W CCT5P40413 562 aaKnown RBP2.42□□□□□ -2.02
VPS34YLR240W GZF3P42944 551 aaKnown RBP2.42□□□□□ -2.02
VPS34YLR240W YGR153WP48238 217 aa2.42□□□□□ -2.02
VPS34YLR240W UBA2P52488 636 aa2.42□□□□□ -2.02
VPS34YLR240W PAN2P53010 1115 aaPredicted RBP2.42□□□□□ -2.02
VPS34YLR240W TMN2Q04562 672 aa2.42□□□□□ -2.02
VPS34YLR240W THI22Q06490 572 aa2.42□□□□□ -2.02
VPS34YLR240W PEX1P24004 1043 aa2.42□□□□□ -2.02
VPS34YLR240W IMG2P25642 146 aaPredicted RBP2.42□□□□□ -2.02
VPS34YLR240W YKR075CP36155 307 aa2.42□□□□□ -2.02
VPS34YLR240W PCL5P38794 229 aa2.42□□□□□ -2.02
VPS34YLR240W RSC8P43609 557 aaKnown RBP2.42□□□□□ -2.02
VPS34YLR240W YGR237CP50089 785 aa2.42□□□□□ -2.02
VPS34YLR240W COX18P53239 316 aa2.42□□□□□ -2.02
VPS34YLR240W FHN1P53279 174 aa2.42□□□□□ -2.02
VPS34YLR240W SSL2Q00578 843 aa2.42□□□□□ -2.02
VPS34YLR240W RGC1Q06108 1083 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 94.9 ms