RNA–Protein interactions for RNA: YDR205W

MSC2, Transcript of Endoplasmic reticulum zinc transporter, yeast

Gene MSC2, Length 2,175 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC2	YDR205W	FMP25	Q08023	583 aa		4.85	□□□□□ -1.63
MSC2	YDR205W	SDH5	Q08230	162 aa		4.85	□□□□□ -1.63
MSC2	YDR205W	RKM4	Q12504	494 aa		4.85	□□□□□ -1.63
MSC2	YDR205W	SPS1	P08458	490 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	SWI6	P09959	803 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	DBP5	P20449	482 aa	Known RBP	4.84	□□□□□ -1.63
MSC2	YDR205W	TKL1	P23254	680 aa	Known RBP	4.84	□□□□□ -1.63
MSC2	YDR205W	AAD3	P25612	363 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	DBF20	P32328	564 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	SHP1	P34223	423 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	YEL1	P34225	687 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	NUP120	P35729	1037 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	BYE1	P36106	594 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	YHR218W	P38899	603 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	PNT1	P38969	423 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	SAP185	P40856	1058 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	ESBP6	P53918	673 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	YNL115C	P53925	644 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	RBA50	Q04418	439 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	SOV1	Q04748	898 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	TSR2	Q06672	205 aa	Known RBP	4.84	□□□□□ -1.63
MSC2	YDR205W	CSR1	Q06705	408 aa	Known RBP	4.84	□□□□□ -1.63
MSC2	YDR205W	MLH2	Q07980	695 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	CFT2	Q12102	859 aa	Predicted RBP	4.84	□□□□□ -1.63
MSC2	YDR205W	ERP3	Q12403	225 aa		4.84	□□□□□ -1.63
MSC2	YDR205W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.64	not detected
MSC2	YDR205W	PTP2	P29461	750 aa		4.84	□□□□□ -1.64
MSC2	YDR205W	MKK2	P32491	506 aa		4.84	□□□□□ -1.64
MSC2	YDR205W	SMC1	P32908	1225 aa		4.84	□□□□□ -1.64
MSC2	YDR205W	XRS2	P33301	854 aa		4.84	□□□□□ -1.64
MSC2	YDR205W	CNS1	P33313	385 aa		4.84	□□□□□ -1.64
MSC2	YDR205W	NIP100	P33420	868 aa		4.84	□□□□□ -1.64
MSC2	YDR205W	TVP38	P36164	337 aa		4.84	□□□□□ -1.64
MSC2	YDR205W	YIL089W	P40500	205 aa		4.84	□□□□□ -1.64
MSC2	YDR205W	SEC27	P41811	889 aa	Known RBP	4.84	□□□□□ -1.64
MSC2	YDR205W	RSC8	P43609	557 aa	Known RBP	4.84	□□□□□ -1.64
MSC2	YDR205W	YNL011C	P53980	444 aa		4.84	□□□□□ -1.64
MSC2	YDR205W	TIM11	P81449	96 aa	Predicted RBP	4.84	□□□□□ -1.64
MSC2	YDR205W	YDR286C	Q05530	114 aa		4.84	□□□□□ -1.64
MSC2	YDR205W	HEL2	Q05580	639 aa	Known RBP	4.84	□□□□□ -1.64
MSC2	YDR205W	ERF2	Q06551	359 aa		4.84	□□□□□ -1.64
MSC2	YDR205W	SMC5	Q08204	1093 aa		4.84	□□□□□ -1.64
MSC2	YDR205W	BDS1	Q08347	646 aa		4.84	□□□□□ -1.64
MSC2	YDR205W	YPL191C	Q08930	360 aa		4.84	□□□□□ -1.64
MSC2	YDR205W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
MSC2	YDR205W	AMS1	P22855	1083 aa		4.83	□□□□□ -1.64
MSC2	YDR205W	MEF1	P25039	761 aa		4.83	□□□□□ -1.64
MSC2	YDR205W	COT1	P32798	439 aa		4.83	□□□□□ -1.64
MSC2	YDR205W	ATG19	P35193	415 aa		4.83	□□□□□ -1.64
MSC2	YDR205W	SMF1	P38925	575 aa		4.83	□□□□□ -1.64
MSC2	YDR205W	CCT4	P39078	528 aa	Known RBP	4.83	□□□□□ -1.64
MSC2	YDR205W	CTR1	P49573	406 aa		4.83	□□□□□ -1.64
MSC2	YDR205W	PRP31	P49704	494 aa	Predicted RBP	4.83	□□□□□ -1.64
MSC2	YDR205W	MDR1	P53258	950 aa		4.83	□□□□□ -1.64
MSC2	YDR205W	BTN2	P53286	410 aa		4.83	□□□□□ -1.64
MSC2	YDR205W	ROD1	Q02805	837 aa		4.83	□□□□□ -1.64
MSC2	YDR205W	OSH2	Q12451	1283 aa		4.83	□□□□□ -1.64
MSC2	YDR205W	TRP2	P00899	507 aa	Known RBP	4.82	□□□□□ -1.64
MSC2	YDR205W	CHS2	P14180	963 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	HSP60	P19882	572 aa	Known RBP	4.82	□□□□□ -1.64
MSC2	YDR205W	RPO26	P20435	155 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	NAM7	P30771	971 aa	Known RBP	4.82	□□□□□ -1.64
MSC2	YDR205W	ISC10	P32645	267 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	PTH2	P34222	208 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	KTR4	P38131	464 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	REG2	P38232	338 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	YHL041W	P38730	149 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	SET5	P38890	526 aa	Known RBP	4.82	□□□□□ -1.64
MSC2	YDR205W	MMM1	P41800	426 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	UBP15	P50101	1230 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	YGL039W	P53183	348 aa	Known RBP	4.82	□□□□□ -1.64
MSC2	YDR205W	TAM41	P53230	385 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	TIM8	P57744	87 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
MSC2	YDR205W	FAP7	Q12055	197 aa	Predicted RBP	4.82	□□□□□ -1.64
MSC2	YDR205W	LAA1	P39526	2014 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	SNF1	P06782	633 aa	Known RBP	4.82	□□□□□ -1.64
MSC2	YDR205W	KIP1	P28742	1111 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	DBP7	P36120	742 aa	Known RBP	4.82	□□□□□ -1.64
MSC2	YDR205W	TDA3	P38758	523 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	CIN4	P39110	191 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	GPP2	P40106	250 aa	Known RBP	4.82	□□□□□ -1.64
MSC2	YDR205W	SEC26	P41810	973 aa	Known RBP	4.82	□□□□□ -1.64
MSC2	YDR205W	YJR115W	P47152	169 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	SGM1	P47166	707 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	SHE10	P53075	577 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	STE20	Q03497	939 aa	Known RBP	4.82	□□□□□ -1.64
MSC2	YDR205W	RCF1	Q03713	159 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	ATG23	Q06671	453 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	SIL1	Q08199	421 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	MOT1	P32333	1867 aa		4.82	□□□□□ -1.64
MSC2	YDR205W	BAS1	P22035	811 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	SEC21	P32074	935 aa	Known RBP	4.81	□□□□□ -1.64
MSC2	YDR205W	RME1	P32338	300 aa	Known RBP	4.81	□□□□□ -1.64
MSC2	YDR205W	VMA8	P32610	256 aa	Known RBP	4.81	□□□□□ -1.64
MSC2	YDR205W	SMY2	P32909	740 aa	Known RBP	4.81	□□□□□ -1.64
MSC2	YDR205W	YMR124W	P39523	943 aa	Known RBP	4.81	□□□□□ -1.64
MSC2	YDR205W	YEL025C	P39991	1188 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	VPS53	P47061	822 aa		4.81	□□□□□ -1.64
MSC2	YDR205W	RRB1	Q04225	511 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms