RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 KLHDC4Q8TBB5 520 aa18.08■□□□□ 0.48
HNRNPU-229ENST00000640440 PRDM10Q9NQV6 1147 aa18.08■□□□□ 0.48
HNRNPU-229ENST00000640440 F8W031 263 aaPredicted RBP18.07■□□□□ 0.48
HNRNPU-229ENST00000640440 GYG1P46976 350 aa18.07■□□□□ 0.48
HNRNPU-229ENST00000640440 MMP14P50281 582 aa18.07■□□□□ 0.48
HNRNPU-229ENST00000640440 RARSP54136 660 aaKnown RBP18.07■□□□□ 0.48
HNRNPU-229ENST00000640440 METTL24Q5JXM2 366 aa18.07■□□□□ 0.48
HNRNPU-229ENST00000640440 RGMBQ6NW40 437 aa18.07■□□□□ 0.48
HNRNPU-229ENST00000640440 API5Q9BZZ5 524 aaKnown RBP18.07■□□□□ 0.48
HNRNPU-229ENST00000640440 BRPF1P55201 1214 aaPredicted RBP18.06■□□□□ 0.48
HNRNPU-229ENST00000640440 PRAMEF18Q5VWM3 479 aa18.06■□□□□ 0.48
HNRNPU-229ENST00000640440 UBTFL1P0CB47 393 aaPredicted RBP18.05■□□□□ 0.48
HNRNPU-229ENST00000640440 HIBADHP31937 336 aaKnown RBP18.05■□□□□ 0.48
HNRNPU-229ENST00000640440 ZNF157P51786 506 aaPredicted RBP18.05■□□□□ 0.48
HNRNPU-229ENST00000640440 NOGQ13253 232 aa18.05■□□□□ 0.48
HNRNPU-229ENST00000640440 ZBED3Q96IU2 234 aaPredicted RBP18.05■□□□□ 0.48
HNRNPU-229ENST00000640440 ZIC5Q96T25 663 aa18.05■□□□□ 0.48
HNRNPU-229ENST00000640440 KIF16BQ96L93 1317 aa18.04■□□□□ 0.48
HNRNPU-229ENST00000640440 FKBP1AP62942 108 aaKnown RBP18.04■□□□□ 0.48
HNRNPU-229ENST00000640440 DLGAP5Q15398 846 aa18.04■□□□□ 0.48
HNRNPU-229ENST00000640440 APOBEC3FQ8IUX4 373 aaKnown RBP18.04■□□□□ 0.48
HNRNPU-229ENST00000640440 VGLL2Q8N8G2 317 aa18.04■□□□□ 0.48
HNRNPU-229ENST00000640440 TDRD7Q8NHU6 1098 aaKnown RBP18.04■□□□□ 0.48
HNRNPU-229ENST00000640440 FAM84BQ96KN1 310 aaPredicted RBP18.04■□□□□ 0.48
HNRNPU-229ENST00000640440 TSKSQ9UJT2 592 aa18.04■□□□□ 0.48
HNRNPU-229ENST00000640440 PCDHAC2Q9Y5I4 1007 aa18.04■□□□□ 0.48
HNRNPU-229ENST00000640440 FAM205AQ6ZU69 1335 aa18.03■□□□□ 0.48
HNRNPU-229ENST00000640440 FAM155AB1AL88 458 aaPredicted RBP18.03■□□□□ 0.48
HNRNPU-229ENST00000640440 CAPN15O75808 1086 aa18.03■□□□□ 0.48
HNRNPU-229ENST00000640440 PDE8BO95263 885 aa18.03■□□□□ 0.48
HNRNPU-229ENST00000640440 RFX5P48382 616 aaPredicted RBP18.03■□□□□ 0.48
HNRNPU-229ENST00000640440 MFSD14BQ5SR56 506 aa18.03■□□□□ 0.48
HNRNPU-229ENST00000640440 MOB2Q70IA6 237 aa18.03■□□□□ 0.48
HNRNPU-229ENST00000640440 VPS37DQ86XT2 251 aa18.03■□□□□ 0.48
HNRNPU-229ENST00000640440 FKBP1BP68106 108 aa18.02■□□□□ 0.48
HNRNPU-229ENST00000640440 HNRNPUQ00839 825 aaKnown RBP eCLIP18.02■□□□□ 0.48
HNRNPU-229ENST00000640440 CFAP100Q494V2 611 aa18.02■□□□□ 0.48
HNRNPU-229ENST00000640440 CCDC102AQ96A19 550 aa18.02■□□□□ 0.48
HNRNPU-229ENST00000640440 IQSEC3Q9UPP2 1182 aaPredicted RBP18.02■□□□□ 0.48
HNRNPU-229ENST00000640440 LRRFIP2Q9Y608 721 aaKnown RBP18.02■□□□□ 0.48
HNRNPU-229ENST00000640440 EYA2O00167 538 aa18.01■□□□□ 0.47
HNRNPU-229ENST00000640440 SLC10A3P09131 477 aa18.01■□□□□ 0.47
HNRNPU-229ENST00000640440 NF2P35240 595 aa18.01■□□□□ 0.47
HNRNPU-229ENST00000640440 PTPN12Q05209 780 aaKnown RBP18.01■□□□□ 0.47
HNRNPU-229ENST00000640440 TTLL12Q14166 644 aaPredicted RBP18.01■□□□□ 0.47
HNRNPU-229ENST00000640440 FBXO33Q7Z6M2 555 aa18.01■□□□□ 0.47
HNRNPU-229ENST00000640440 MTMR14Q8NCE2 650 aa18.01■□□□□ 0.47
HNRNPU-229ENST00000640440 COL1A1P02452 1464 aaPredicted RBP18.01■□□□□ 0.47
HNRNPU-229ENST00000640440 SPDYE2BA6NHP3 402 aa18■□□□□ 0.47
HNRNPU-229ENST00000640440 CA12O43570 354 aa18■□□□□ 0.47
HNRNPU-229ENST00000640440 SPDYE6P0CI01 402 aa18■□□□□ 0.47
HNRNPU-229ENST00000640440 RBM5P52756 815 aaKnown RBP eCLIP18■□□□□ 0.472e-11■■■■□ 22.2
HNRNPU-229ENST00000640440 PUM3Q15397 648 aaKnown RBP18■□□□□ 0.47
HNRNPU-229ENST00000640440 CAVIN4Q5BKX8 364 aa18■□□□□ 0.47
HNRNPU-229ENST00000640440 RASAL3Q86YV0 1011 aa18■□□□□ 0.47
HNRNPU-229ENST00000640440 ARHGAP45Q92619 1136 aa18■□□□□ 0.47
HNRNPU-229ENST00000640440 MEIS3Q99687 375 aa18■□□□□ 0.47
HNRNPU-229ENST00000640440 TTF2Q9UNY4 1162 aaKnown RBP18■□□□□ 0.47
HNRNPU-229ENST00000640440 AOX1Q06278 1338 aa17.99■□□□□ 0.47
HNRNPU-229ENST00000640440 CLRN2A0PK11 232 aa17.99■□□□□ 0.47
HNRNPU-229ENST00000640440 MYO1BO43795 1136 aa17.99■□□□□ 0.47
HNRNPU-229ENST00000640440 IFIT1P09914 478 aaKnown RBP17.99■□□□□ 0.47
HNRNPU-229ENST00000640440 KIF23Q02241 960 aaPredicted RBP17.99■□□□□ 0.47
HNRNPU-229ENST00000640440 CHAF1AQ13111 956 aaPredicted RBP17.99■□□□□ 0.47
HNRNPU-229ENST00000640440 PRMT6Q96LA8 375 aaPredicted RBP17.99■□□□□ 0.47
HNRNPU-229ENST00000640440 SIL1Q9H173 461 aa17.99■□□□□ 0.47
HNRNPU-229ENST00000640440 UBE2Q2LH0YL09 131 aa17.98■□□□□ 0.47
HNRNPU-229ENST00000640440 FRAT2O75474 233 aaPredicted RBP17.98■□□□□ 0.47
HNRNPU-229ENST00000640440 BCAR3O75815 825 aa17.98■□□□□ 0.47
HNRNPU-229ENST00000640440 FGFR2P21802 821 aa17.98■□□□□ 0.47
HNRNPU-229ENST00000640440 BCAMP50895 628 aa17.98■□□□□ 0.47
HNRNPU-229ENST00000640440 INTS3Q68E01 1043 aaKnown RBP17.98■□□□□ 0.47
HNRNPU-229ENST00000640440 ATG9AQ7Z3C6 839 aa17.98■□□□□ 0.47
HNRNPU-229ENST00000640440 FRAT1Q92837 279 aaPredicted RBP17.98■□□□□ 0.47
HNRNPU-229ENST00000640440 DEFB129Q9H1M3 183 aa17.98■□□□□ 0.47
HNRNPU-229ENST00000640440 VEZTQ9HBM0 779 aa17.98■□□□□ 0.47
HNRNPU-229ENST00000640440 HDAC5Q9UQL6 1122 aa17.98■□□□□ 0.47
HNRNPU-229ENST00000640440 IPO8O15397 1037 aaKnown RBP17.97■□□□□ 0.47
HNRNPU-229ENST00000640440 SLC5A1P13866 664 aa17.97■□□□□ 0.47
HNRNPU-229ENST00000640440 TRIM27P14373 513 aa17.97■□□□□ 0.47
HNRNPU-229ENST00000640440 PRKG1Q13976 671 aa17.97■□□□□ 0.47
HNRNPU-229ENST00000640440 TNNQ9UQP3 1299 aa17.97■□□□□ 0.47
HNRNPU-229ENST00000640440 CIAO1O76071 339 aa17.96■□□□□ 0.47
HNRNPU-229ENST00000640440 GRIK5Q16478 980 aa17.96■□□□□ 0.47
HNRNPU-229ENST00000640440 SERPINA10Q9UK55 444 aa17.96■□□□□ 0.47
HNRNPU-229ENST00000640440 PA2G4Q9UQ80 394 aaKnown RBP17.96■□□□□ 0.47
HNRNPU-229ENST00000640440 OTOFQ9HC10 1997 aa17.96■□□□□ 0.47
HNRNPU-229ENST00000640440 SSC5DA1L4H1 1573 aa17.96■□□□□ 0.46
HNRNPU-229ENST00000640440 ATF7IPQ6VMQ6 1270 aa17.95■□□□□ 0.46
HNRNPU-229ENST00000640440 ARMC9Q7Z3E5 817 aa17.95■□□□□ 0.46
HNRNPU-229ENST00000640440 TBC1D22AQ8WUA7 517 aa17.95■□□□□ 0.46
HNRNPU-229ENST00000640440 LPIN2Q92539 896 aa17.95■□□□□ 0.46
HNRNPU-229ENST00000640440 FBXO3Q9UK99 471 aa17.95■□□□□ 0.46
HNRNPU-229ENST00000640440 FZD1Q9UP38 647 aa17.95■□□□□ 0.46
HNRNPU-229ENST00000640440 PPP2R3BQ9Y5P8 575 aa17.95■□□□□ 0.46
HNRNPU-229ENST00000640440 AK9Q5TCS8 1911 aa17.95■□□□□ 0.46
HNRNPU-229ENST00000640440 GNAI3P08754 354 aa17.94■□□□□ 0.46
HNRNPU-229ENST00000640440 CRKP46108 304 aa17.94■□□□□ 0.46
HNRNPU-229ENST00000640440 ATP2B3Q16720 1220 aa17.94■□□□□ 0.46
HNRNPU-229ENST00000640440 SPDYE2Q495Y8 402 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms