RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 MYO3BQ8WXR4 1341 aa20.61■□□□□ 0.89
COLCA2-207ENST00000639470 RARSP54136 660 aaKnown RBP20.61■□□□□ 0.89
COLCA2-207ENST00000639470 RGMBQ6NW40 437 aa20.61■□□□□ 0.89
COLCA2-207ENST00000639470 FAM84BQ96KN1 310 aaPredicted RBP20.61■□□□□ 0.89
COLCA2-207ENST00000639470 PRDM10Q9NQV6 1147 aa20.61■□□□□ 0.89
COLCA2-207ENST00000639470 RFX5P48382 616 aaPredicted RBP20.6■□□□□ 0.89
COLCA2-207ENST00000639470 VGLL2Q8N8G2 317 aa20.6■□□□□ 0.89
COLCA2-207ENST00000639470 PITPNM2Q9BZ72 1349 aa20.59■□□□□ 0.89
COLCA2-207ENST00000639470 CLRN2A0PK11 232 aa20.59■□□□□ 0.89
COLCA2-207ENST00000639470 UBE2Q2LH0YL09 131 aa20.59■□□□□ 0.89
COLCA2-207ENST00000639470 MAP2K2P36507 400 aa20.59■□□□□ 0.89
COLCA2-207ENST00000639470 ZNF157P51786 506 aaPredicted RBP20.59■□□□□ 0.89
COLCA2-207ENST00000639470 PRKG1Q13976 671 aa20.59■□□□□ 0.89
COLCA2-207ENST00000639470 METTL24Q5JXM2 366 aa20.59■□□□□ 0.89
COLCA2-207ENST00000639470 KIF23Q02241 960 aaPredicted RBP20.58■□□□□ 0.89
COLCA2-207ENST00000639470 UBE4AQ14139 1066 aa20.58■□□□□ 0.89
COLCA2-207ENST00000639470 TDRD7Q8NHU6 1098 aaKnown RBP20.58■□□□□ 0.89
COLCA2-207ENST00000639470 MEIS3Q99687 375 aa20.58■□□□□ 0.89
COLCA2-207ENST00000639470 HIBADHP31937 336 aaKnown RBP20.57■□□□□ 0.88
COLCA2-207ENST00000639470 CFAP100Q494V2 611 aa20.57■□□□□ 0.88
COLCA2-207ENST00000639470 RASAL3Q86YV0 1011 aa20.57■□□□□ 0.88
COLCA2-207ENST00000639470 BCAR3O75815 825 aa20.56■□□□□ 0.88
COLCA2-207ENST00000639470 SLC10A3P09131 477 aa20.56■□□□□ 0.88
COLCA2-207ENST00000639470 CHAF1AQ13111 956 aaPredicted RBP20.56■□□□□ 0.88
COLCA2-207ENST00000639470 NOGQ13253 232 aa20.56■□□□□ 0.88
COLCA2-207ENST00000639470 DLGAP5Q15398 846 aa20.56■□□□□ 0.88
COLCA2-207ENST00000639470 DIEXFQ68CQ4 756 aaKnown RBP20.56■□□□□ 0.88
COLCA2-207ENST00000639470 PRMT6Q96LA8 375 aaPredicted RBP20.56■□□□□ 0.88
COLCA2-207ENST00000639470 SIL1Q9H173 461 aa20.56■□□□□ 0.88
COLCA2-207ENST00000639470 HDAC9Q9UKV0 1011 aa20.56■□□□□ 0.88
COLCA2-207ENST00000639470 MROH5Q6ZUA9 1318 aa20.55■□□□□ 0.88
COLCA2-207ENST00000639470 BCAMP50895 628 aa20.55■□□□□ 0.88
COLCA2-207ENST00000639470 BRPF1P55201 1214 aaPredicted RBP20.55■□□□□ 0.88
COLCA2-207ENST00000639470 PTPN12Q05209 780 aaKnown RBP20.55■□□□□ 0.88
COLCA2-207ENST00000639470 BEGAINQ9BUH8 593 aa20.55■□□□□ 0.88
COLCA2-207ENST00000639470 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.55■□□□□ 0.88
COLCA2-207ENST00000639470 PA2G4Q9UQ80 394 aaKnown RBP20.55■□□□□ 0.88
COLCA2-207ENST00000639470 LRRFIP2Q9Y608 721 aaKnown RBP20.55■□□□□ 0.88
COLCA2-207ENST00000639470 FAM205AQ6ZU69 1335 aa20.54■□□□□ 0.88
COLCA2-207ENST00000639470 UBTFL1P0CB47 393 aaPredicted RBP20.54■□□□□ 0.88
COLCA2-207ENST00000639470 MKRN3Q13064 507 aaKnown RBP20.54■□□□□ 0.88
COLCA2-207ENST00000639470 MFSD14BQ5SR56 506 aa20.54■□□□□ 0.88
COLCA2-207ENST00000639470 ATG9AQ7Z3C6 839 aa20.54■□□□□ 0.88
COLCA2-207ENST00000639470 FBXO33Q7Z6M2 555 aa20.54■□□□□ 0.88
COLCA2-207ENST00000639470 SSC5DA1L4H1 1573 aa20.54■□□□□ 0.88
COLCA2-207ENST00000639470 SPDYE2BA6NHP3 402 aa20.53■□□□□ 0.88
COLCA2-207ENST00000639470 PDE8BO95263 885 aa20.53■□□□□ 0.88
COLCA2-207ENST00000639470 CT47B1P0C2W7 299 aaPredicted RBP20.53■□□□□ 0.88
COLCA2-207ENST00000639470 SPDYE6P0CI01 402 aa20.53■□□□□ 0.88
COLCA2-207ENST00000639470 TTLL12Q14166 644 aaPredicted RBP20.53■□□□□ 0.88
COLCA2-207ENST00000639470 CDAN1Q8IWY9 1227 aa20.53■□□□□ 0.88
COLCA2-207ENST00000639470 PAPPA2Q9BXP8 1791 aa20.52■□□□□ 0.88
COLCA2-207ENST00000639470 EYA2O00167 538 aa20.52■□□□□ 0.88
COLCA2-207ENST00000639470 FGFR2P21802 821 aa20.52■□□□□ 0.88
COLCA2-207ENST00000639470 RBM5P52756 815 aaKnown RBP eCLIP20.52■□□□□ 0.88
COLCA2-207ENST00000639470 HNRNPUQ00839 825 aaKnown RBP eCLIP20.52■□□□□ 0.88
COLCA2-207ENST00000639470 CSRNP1Q96S65 589 aa20.52■□□□□ 0.88
COLCA2-207ENST00000639470 API5Q9BZZ5 524 aaKnown RBP20.52■□□□□ 0.88
COLCA2-207ENST00000639470 VEZTQ9HBM0 779 aa20.52■□□□□ 0.88
COLCA2-207ENST00000639470 FKBP1AP62942 108 aaKnown RBP20.51■□□□□ 0.87
COLCA2-207ENST00000639470 APOBEC3FQ8IUX4 373 aaKnown RBP20.51■□□□□ 0.87
COLCA2-207ENST00000639470 CLUAP1Q96AJ1 413 aa20.51■□□□□ 0.87
COLCA2-207ENST00000639470 DEFB129Q9H1M3 183 aa20.51■□□□□ 0.87
COLCA2-207ENST00000639470 TTF2Q9UNY4 1162 aaKnown RBP20.51■□□□□ 0.87
COLCA2-207ENST00000639470 COL1A1P02452 1464 aaPredicted RBP20.5■□□□□ 0.87
COLCA2-207ENST00000639470 TRIM27P14373 513 aa20.5■□□□□ 0.87
COLCA2-207ENST00000639470 MTMR14Q8NCE2 650 aa20.5■□□□□ 0.87
COLCA2-207ENST00000639470 FRAT1Q92837 279 aaPredicted RBP20.5■□□□□ 0.87
COLCA2-207ENST00000639470 CCDC102AQ96A19 550 aa20.5■□□□□ 0.87
COLCA2-207ENST00000639470 TDRD3Q9H7E2 651 aaKnown RBP20.5■□□□□ 0.87
COLCA2-207ENST00000639470 TRPA1O75762 1119 aa20.49■□□□□ 0.87
COLCA2-207ENST00000639470 VPS37DQ86XT2 251 aa20.49■□□□□ 0.87
COLCA2-207ENST00000639470 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.49■□□□□ 0.87
COLCA2-207ENST00000639470 FKBP1BP68106 108 aa20.48■□□□□ 0.87
COLCA2-207ENST00000639470 PUM3Q15397 648 aaKnown RBP20.48■□□□□ 0.87
COLCA2-207ENST00000639470 NBPF12Q5TAG4 269 aaPredicted RBP20.48■□□□□ 0.87
COLCA2-207ENST00000639470 CLMNQ96JQ2 1002 aa20.48■□□□□ 0.87
COLCA2-207ENST00000639470 RNF186Q9NXI6 227 aa20.48■□□□□ 0.87
COLCA2-207ENST00000639470 ANGEL1Q9UNK9 670 aaKnown RBP20.48■□□□□ 0.87
COLCA2-207ENST00000639470 CRKP46108 304 aa20.47■□□□□ 0.87
COLCA2-207ENST00000639470 CACNB3P54284 484 aa20.47■□□□□ 0.87
COLCA2-207ENST00000639470 INTS3Q68E01 1043 aaKnown RBP20.47■□□□□ 0.87
COLCA2-207ENST00000639470 ZNF70Q9UC06 446 aaPredicted RBP20.47■□□□□ 0.87
COLCA2-207ENST00000639470 KIF16BQ96L93 1317 aa20.47■□□□□ 0.87
COLCA2-207ENST00000639470 FRAT2O75474 233 aaPredicted RBP20.46■□□□□ 0.87
COLCA2-207ENST00000639470 ADORA1P30542 326 aa20.46■□□□□ 0.87
COLCA2-207ENST00000639470 RASA3Q14644 834 aa20.46■□□□□ 0.87
COLCA2-207ENST00000639470 CAVIN4Q5BKX8 364 aa20.46■□□□□ 0.87
COLCA2-207ENST00000639470 DZIP1LQ8IYY4 767 aaKnown RBP20.46■□□□□ 0.87
COLCA2-207ENST00000639470 TCP10L2B9ZVM9 353 aa20.45■□□□□ 0.86
COLCA2-207ENST00000639470 IFIT1P09914 478 aaKnown RBP20.45■□□□□ 0.86
COLCA2-207ENST00000639470 NF2P35240 595 aa20.45■□□□□ 0.86
COLCA2-207ENST00000639470 SPDYE2Q495Y8 402 aa20.45■□□□□ 0.86
COLCA2-207ENST00000639470 ABHD8Q96I13 439 aa20.45■□□□□ 0.86
COLCA2-207ENST00000639470 MMP14P50281 582 aa20.44■□□□□ 0.86
COLCA2-207ENST00000639470 LDLRAD1Q5T700 205 aa20.44■□□□□ 0.86
COLCA2-207ENST00000639470 ARHGAP45Q92619 1136 aa20.44■□□□□ 0.86
COLCA2-207ENST00000639470 CA12O43570 354 aa20.43■□□□□ 0.86
COLCA2-207ENST00000639470 SLC5A1P13866 664 aa20.43■□□□□ 0.86
COLCA2-207ENST00000639470 PHKA1P46020 1223 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms