RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 MMS22LQ6ZRQ5 1243 aa12.27□□□□□ -0.44
KCNMA1-259ENST00000639406 SDCCAG8Q86SQ7 713 aaPredicted RBP12.27□□□□□ -0.44
KCNMA1-259ENST00000639406 BOLA2Q9H3K6 86 aa12.27□□□□□ -0.44
KCNMA1-259ENST00000639406 USP16Q9Y5T5 823 aa12.27□□□□□ -0.44
KCNMA1-259ENST00000639406 CCDC82Q8N4S0 544 aa12.27□□□□□ -0.44
KCNMA1-259ENST00000639406 ZGPATQ8N5A5 531 aaKnown RBP12.27□□□□□ -0.44
KCNMA1-259ENST00000639406 AIDAQ96BJ3 306 aa12.27□□□□□ -0.44
KCNMA1-259ENST00000639406 ZC4H2Q9NQZ6 224 aa12.27□□□□□ -0.44
KCNMA1-259ENST00000639406 FGD5Q6ZNL6 1462 aa12.27□□□□□ -0.45
KCNMA1-259ENST00000639406 RAD54L2Q9Y4B4 1467 aa12.27□□□□□ -0.45
KCNMA1-259ENST00000639406 TMEM110-MUSTN1A8MSY1 372 aa12.27□□□□□ -0.45
KCNMA1-259ENST00000639406 FERMT2Q96AC1 680 aa12.27□□□□□ -0.45
KCNMA1-259ENST00000639406 EPSTI1Q96J88 318 aa12.27□□□□□ -0.45
KCNMA1-259ENST00000639406 STRN4Q9NRL3 753 aa12.27□□□□□ -0.45
KCNMA1-259ENST00000639406 ZNF215Q9UL58 517 aaPredicted RBP12.27□□□□□ -0.45
KCNMA1-259ENST00000639406 IRX4P78413 519 aa12.27□□□□□ -0.45
KCNMA1-259ENST00000639406 SH3GL3Q99963 347 aa12.27□□□□□ -0.45
KCNMA1-259ENST00000639406 MMRN2Q9H8L6 949 aa12.27□□□□□ -0.45
KCNMA1-259ENST00000639406 PLCB1Q9NQ66 1216 aa12.27□□□□□ -0.45
KCNMA1-259ENST00000639406 PSMD6Q15008 389 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 CROCCP2Q86T23 111 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 JAKMIP2Q96AA8 810 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 MED4Q9NPJ6 270 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 CCDC194A0A1B0GVG4 234 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 NEK1Q96PY6 1258 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 TCP11L1Q9NUJ3 509 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 TRIM35Q9UPQ4 493 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 MGEA5O60502 916 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 FCHSD2O94868 740 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 POLD1P28340 1107 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 PAK2Q13177 524 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 SMC1BQ8NDV3 1235 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 Q9H521 79 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 PDE11AQ9HCR9 933 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 UTP11Q9Y3A2 253 aaKnown RBP12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 PRG4Q92954 1404 aaPredicted RBP12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 TOPBP1Q92547 1522 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 SPECC1L-ADORA2AF8WAN1 911 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 IARSP41252 1262 aaKnown RBP12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 MAGEA9P43362 315 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 SEC63Q9UGP8 760 aaKnown RBP12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 SUFUQ9UMX1 484 aa12.26□□□□□ -0.45
KCNMA1-259ENST00000639406 EFCAB8A8MWE9 144 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 ESCO1Q5FWF5 840 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 HAUS1Q96CS2 278 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 FERMT1Q9BQL6 677 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 TRIM6Q9C030 488 aaPredicted RBP12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 A0A087WZG4 1122 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 MTMR3Q13615 1198 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 CBX8Q9HC52 389 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 MYO1CO00159 1063 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 GMNNO75496 209 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 IRX5P78411 483 aaPredicted RBP12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 CYP26C1Q6V0L0 522 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 BICD1Q96G01 975 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 ELP1O95163 1332 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 HSPA1LP34931 641 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 ATP1A2P50993 1020 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 ARID5AQ03989 594 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 PDCD7Q8N8D1 485 aaKnown RBP12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 RGS22Q8NE09 1264 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 EVI5LQ96CN4 794 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 GDAP1L1Q96MZ0 367 aa12.25□□□□□ -0.45
KCNMA1-259ENST00000639406 ATP8B1O43520 1251 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 LCA5Q86VQ0 697 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 YY1AP1Q9H869 796 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 FAM204AQ9H8W3 233 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 HMG20BQ9P0W2 317 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 SCOCQ9UIL1 159 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 ZNF213O14771 459 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 RNF40O75150 1001 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 BAG2O95816 211 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 MARCKSP29966 332 aaPredicted RBP12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 MYL5Q02045 173 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 TRIM27P14373 513 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 NPHP3Q7Z494 1330 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 UBA7P41226 1012 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 USP6NLQ92738 828 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 PSMA7O14818 248 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 DNAJC8O75937 253 aaPredicted RBP12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 RNF8O76064 485 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 HDAC1Q13547 482 aaPredicted RBP12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 LRRC27Q9C0I9 530 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 NLRP2Q9NX02 1062 aa12.24□□□□□ -0.45
KCNMA1-259ENST00000639406 DNMBPQ6XZF7 1577 aa12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 ACTN4O43707 911 aaKnown RBP12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 IDH1O75874 414 aaKnown RBP12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 STX17P56962 302 aa12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 TAF11Q15544 211 aa12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 STAC3Q96MF2 364 aa12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 KLHL14Q9P2G3 628 aa12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 SEC24BO95487 1268 aa12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 SDSP20132 328 aa12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 HHATQ5VTY9 493 aa12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 KIF6Q6ZMV9 814 aa12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 PLEKHA4Q9H4M7 779 aa12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 NDC80O14777 642 aa12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 SPTLC2O15270 562 aa12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 IQCA1Q86XH1 822 aa12.23□□□□□ -0.45
KCNMA1-259ENST00000639406 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms