RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 FMR1Q06787 632 aaKnown RBP eCLIP27.01■■□□□ 1.92
SCN1B-206ENST00000638536 KIAA0825Q8IV33 1275 aa27.01■■□□□ 1.92
SCN1B-206ENST00000638536 SIRT2Q8IXJ6 389 aa27.01■■□□□ 1.92
SCN1B-206ENST00000638536 PCNTO95613 3336 aa27.01■■□□□ 1.91
SCN1B-206ENST00000638536 MYH13Q9UKX3 1938 aa27.01■■□□□ 1.91
SCN1B-206ENST00000638536 ASTN2O75129 1339 aaPredicted RBP27.01■■□□□ 1.91
SCN1B-206ENST00000638536 CAVIN4Q5BKX8 364 aa27.01■■□□□ 1.91
SCN1B-206ENST00000638536 VPS37DQ86XT2 251 aa27.01■■□□□ 1.91
SCN1B-206ENST00000638536 ARAP2Q8WZ64 1704 aa27■■□□□ 1.91
SCN1B-206ENST00000638536 G3BP1Q13283 466 aaKnown RBP eCLIP27■■□□□ 1.91
SCN1B-206ENST00000638536 FAM205AQ6ZU69 1335 aa26.99■■□□□ 1.91
SCN1B-206ENST00000638536 SURF6O75683 361 aaKnown RBP26.99■■□□□ 1.91
SCN1B-206ENST00000638536 KIF4BQ2VIQ3 1234 aa26.99■■□□□ 1.91
SCN1B-206ENST00000638536 PGAP2Q9UHJ9 254 aa26.99■■□□□ 1.91
SCN1B-206ENST00000638536 PASKQ96RG2 1323 aa26.98■■□□□ 1.91
SCN1B-206ENST00000638536 MYOZ2Q9NPC6 264 aa26.98■■□□□ 1.91
SCN1B-206ENST00000638536 MYO3BQ8WXR4 1341 aa26.98■■□□□ 1.91
SCN1B-206ENST00000638536 A0A1B0GUL7 405 aa26.98■■□□□ 1.91
SCN1B-206ENST00000638536 GRIK5Q16478 980 aa26.98■■□□□ 1.91
SCN1B-206ENST00000638536 DLK2Q6UY11 383 aa26.98■■□□□ 1.91
SCN1B-206ENST00000638536 NOP58Q9Y2X3 529 aaKnown RBP26.98■■□□□ 1.91
SCN1B-206ENST00000638536 F8W031 263 aaPredicted RBP26.97■■□□□ 1.91
SCN1B-206ENST00000638536 PHKA1P46020 1223 aa26.97■■□□□ 1.91
SCN1B-206ENST00000638536 COL1A1P02452 1464 aaPredicted RBP26.96■■□□□ 1.91
SCN1B-206ENST00000638536 TRAF5O00463 557 aa26.96■■□□□ 1.91
SCN1B-206ENST00000638536 CHAF1AQ13111 956 aaPredicted RBP26.96■■□□□ 1.91
SCN1B-206ENST00000638536 GLIS2Q9BZE0 524 aaPredicted RBP26.96■■□□□ 1.91
SCN1B-206ENST00000638536 PCDHAC2Q9Y5I4 1007 aa26.96■■□□□ 1.91
SCN1B-206ENST00000638536 MFSD14BQ5SR56 506 aa26.95■■□□□ 1.91
SCN1B-206ENST00000638536 EXOC6BQ9Y2D4 811 aa26.95■■□□□ 1.91
SCN1B-206ENST00000638536 FRAT2O75474 233 aaPredicted RBP26.94■■□□□ 1.9
SCN1B-206ENST00000638536 APLP1P51693 650 aa26.94■■□□□ 1.9
SCN1B-206ENST00000638536 NBPF9Q3BBW0 867 aa26.94■■□□□ 1.9
SCN1B-206ENST00000638536 ZC3H15Q8WU90 426 aaKnown RBP26.94■■□□□ 1.9
SCN1B-206ENST00000638536 XAGE2Q96GT9 111 aa26.94■■□□□ 1.9
SCN1B-206ENST00000638536 FKBP1AP62942 108 aaKnown RBP26.94■■□□□ 1.9
SCN1B-206ENST00000638536 OS9Q13438 667 aaPredicted RBP26.94■■□□□ 1.9
SCN1B-206ENST00000638536 SCARF1Q14162 830 aa26.94■■□□□ 1.9
SCN1B-206ENST00000638536 RPAP2Q8IXW5 612 aaPredicted RBP26.94■■□□□ 1.9
SCN1B-206ENST00000638536 CCDC102BQ68D86 513 aa26.93■■□□□ 1.9
SCN1B-206ENST00000638536 OGFOD1Q8N543 542 aa26.93■■□□□ 1.9
SCN1B-206ENST00000638536 NEUROD6Q96NK8 337 aa26.93■■□□□ 1.9
SCN1B-206ENST00000638536 SCAF8Q9UPN6 1271 aaKnown RBP26.93■■□□□ 1.9
SCN1B-206ENST00000638536 AKAP2Q9Y2D5 859 aa26.93■■□□□ 1.9
SCN1B-206ENST00000638536 TRPM7Q96QT4 1865 aa26.92■■□□□ 1.9
SCN1B-206ENST00000638536 WNT10BO00744 389 aa26.91■■□□□ 1.9
SCN1B-206ENST00000638536 GGA3Q9NZ52 723 aa26.91■■□□□ 1.9
SCN1B-206ENST00000638536 CHMP4BQ9H444 224 aaKnown RBP26.9■■□□□ 1.9
SCN1B-206ENST00000638536 TNNI3KQ59H18 835 aa26.9■■□□□ 1.9
SCN1B-206ENST00000638536 ANGEL2Q5VTE6 544 aaKnown RBP26.9■■□□□ 1.9
SCN1B-206ENST00000638536 USP48Q86UV5 1035 aa26.9■■□□□ 1.9
SCN1B-206ENST00000638536 ZBED3Q96IU2 234 aaPredicted RBP26.9■■□□□ 1.9
SCN1B-206ENST00000638536 CRBNQ96SW2 442 aa26.9■■□□□ 1.9
SCN1B-206ENST00000638536 FPGT-TNNI3KV9GXZ4 949 aa26.9■■□□□ 1.9
SCN1B-206ENST00000638536 AOX1Q06278 1338 aa26.89■■□□□ 1.9
SCN1B-206ENST00000638536 ADM5C9JUS6 153 aa26.88■■□□□ 1.89
SCN1B-206ENST00000638536 HDAC9Q9UKV0 1011 aa26.88■■□□□ 1.89
SCN1B-206ENST00000638536 TTF2Q9UNY4 1162 aaKnown RBP26.88■■□□□ 1.89
SCN1B-206ENST00000638536 CDC37L1Q7L3B6 337 aa26.87■■□□□ 1.89
SCN1B-206ENST00000638536 RASGRF1Q13972 1273 aa26.87■■□□□ 1.89
SCN1B-206ENST00000638536 CFAP100Q494V2 611 aa26.87■■□□□ 1.89
SCN1B-206ENST00000638536 CST9Q5W186 159 aa26.87■■□□□ 1.89
SCN1B-206ENST00000638536 KRT26Q7Z3Y9 468 aa26.87■■□□□ 1.89
SCN1B-206ENST00000638536 DCPSQ96C86 337 aaKnown RBP26.87■■□□□ 1.89
SCN1B-206ENST00000638536 DBNDD2Q9BQY9 259 aa26.87■■□□□ 1.89
SCN1B-206ENST00000638536 GPR108Q9NPR9 543 aa26.87■■□□□ 1.89
SCN1B-206ENST00000638536 EAF2Q96CJ1 260 aaPredicted RBP26.86■■□□□ 1.89
SCN1B-206ENST00000638536 PRMT6Q96LA8 375 aaPredicted RBP26.86■■□□□ 1.89
SCN1B-206ENST00000638536 GNL3LQ9NVN8 582 aaKnown RBP26.86■■□□□ 1.89
SCN1B-206ENST00000638536 TLR7Q9NYK1 1049 aaKnown RBP26.86■■□□□ 1.89
SCN1B-206ENST00000638536 ECM29Q5VYK3 1845 aa26.85■■□□□ 1.89
SCN1B-206ENST00000638536 APBB1O00213 710 aa26.85■■□□□ 1.89
SCN1B-206ENST00000638536 DNAJC5GQ8N7S2 189 aa26.85■■□□□ 1.89
SCN1B-206ENST00000638536 TBC1D22AQ8WUA7 517 aa26.85■■□□□ 1.89
SCN1B-206ENST00000638536 SUPT16HQ9Y5B9 1047 aaKnown RBP26.85■■□□□ 1.89
SCN1B-206ENST00000638536 PCDHB15Q9Y5E8 787 aa26.85■■□□□ 1.89
SCN1B-206ENST00000638536 HMMRO75330 724 aa26.84■■□□□ 1.89
SCN1B-206ENST00000638536 DLGAP5Q15398 846 aa26.84■■□□□ 1.89
SCN1B-206ENST00000638536 PI16Q6UXB8 463 aa26.84■■□□□ 1.89
SCN1B-206ENST00000638536 CCDC8Q9H0W5 538 aaPredicted RBP26.84■■□□□ 1.89
SCN1B-206ENST00000638536 IL1RAPL2Q9NP60 686 aa26.84■■□□□ 1.89
SCN1B-206ENST00000638536 AKAP11Q9UKA4 1901 aa26.84■■□□□ 1.89
SCN1B-206ENST00000638536 MMP14P50281 582 aa26.83■■□□□ 1.89
SCN1B-206ENST00000638536 MTMR14Q8NCE2 650 aa26.83■■□□□ 1.89
SCN1B-206ENST00000638536 DBNLQ9UJU6 430 aaKnown RBP26.83■■□□□ 1.89
SCN1B-206ENST00000638536 DENND2AQ9ULE3 1009 aa26.83■■□□□ 1.89
SCN1B-206ENST00000638536 TMEM88BA6NKF7 163 aa26.83■■□□□ 1.88
SCN1B-206ENST00000638536 PRDX5P30044 214 aa26.83■■□□□ 1.88
SCN1B-206ENST00000638536 WDR66Q8TBY9 1149 aa26.83■■□□□ 1.88
SCN1B-206ENST00000638536 RHPN1Q8TCX5 695 aa26.83■■□□□ 1.88
SCN1B-206ENST00000638536 CREBZFQ9NS37 354 aa26.83■■□□□ 1.88
SCN1B-206ENST00000638536 SPDYE2BA6NHP3 402 aa26.82■■□□□ 1.88
SCN1B-206ENST00000638536 SEMA3EO15041 775 aa26.82■■□□□ 1.88
SCN1B-206ENST00000638536 SPDYE6P0CI01 402 aa26.82■■□□□ 1.88
SCN1B-206ENST00000638536 RBM5P52756 815 aaKnown RBP eCLIP26.82■■□□□ 1.88
SCN1B-206ENST00000638536 GORABQ5T7V8 394 aa26.82■■□□□ 1.88
SCN1B-206ENST00000638536 CRKP46108 304 aa26.81■■□□□ 1.88
SCN1B-206ENST00000638536 ZNF408Q9H9D4 720 aa26.81■■□□□ 1.88
SCN1B-206ENST00000638536 HMG20BQ9P0W2 317 aa26.81■■□□□ 1.88
SCN1B-206ENST00000638536 ZBTB22O15209 634 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms