RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 KIF4AO95239 1232 aa4.69□□□□□ -1.66
GYPB-216ENST00000638448 DNM1Q05193 864 aaKnown RBP4.69□□□□□ -1.66
GYPB-216ENST00000638448 PSMD2Q13200 908 aa4.69□□□□□ -1.66
GYPB-216ENST00000638448 TTC39BQ5VTQ0 682 aaPredicted RBP4.69□□□□□ -1.66
GYPB-216ENST00000638448 CEP135Q66GS9 1140 aa4.69□□□□□ -1.66
GYPB-216ENST00000638448 PDE12Q6L8Q7 609 aaKnown RBP4.69□□□□□ -1.66
GYPB-216ENST00000638448 MAP4K3Q8IVH8 894 aa4.69□□□□□ -1.66
GYPB-216ENST00000638448 GALNT11Q8NCW6 608 aa4.69□□□□□ -1.66
GYPB-216ENST00000638448 EDEM1Q92611 657 aa4.69□□□□□ -1.66
GYPB-216ENST00000638448 DRC1Q96MC2 740 aa4.69□□□□□ -1.66
GYPB-216ENST00000638448 CSRNP1Q96S65 589 aa4.69□□□□□ -1.66
GYPB-216ENST00000638448 ABI2Q9NYB9 513 aaPredicted RBP4.69□□□□□ -1.66
GYPB-216ENST00000638448 TMEM63CQ9P1W3 806 aa4.69□□□□□ -1.66
GYPB-216ENST00000638448 FNDC3AQ9Y2H6 1198 aaKnown RBP4.69□□□□□ -1.66
GYPB-216ENST00000638448 SHROOM4Q9ULL8 1493 aa4.69□□□□□ -1.66
GYPB-216ENST00000638448 LINC01387J3KSC0 135 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 SMNDC1O75940 238 aaKnown RBP eCLIP4.68□□□□□ -1.66
GYPB-216ENST00000638448 WISP1O95388 367 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 HDLBPQ00341 1268 aaKnown RBP4.68□□□□□ -1.66
GYPB-216ENST00000638448 FANCCQ00597 558 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 LRP8Q14114 963 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 PRR23CQ6ZRP0 262 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 Q6ZS46 218 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 METTL16Q86W50 562 aaKnown RBP4.68□□□□□ -1.66
GYPB-216ENST00000638448 DZIP1LQ8IYY4 767 aaKnown RBP4.68□□□□□ -1.66
GYPB-216ENST00000638448 TTC16Q8NEE8 873 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 NUDT16Q96DE0 195 aaKnown RBP4.68□□□□□ -1.66
GYPB-216ENST00000638448 SPACA7Q96KW9 195 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 CARD10Q9BWT7 1032 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 SRCIN1Q9C0H9 1055 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 TGIF2Q9GZN2 237 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 NIF3L1Q9GZT8 377 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 KANSL3Q9P2N6 904 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 SPG7Q9UQ90 795 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 PPME1Q9Y570 386 aa4.68□□□□□ -1.66
GYPB-216ENST00000638448 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.67□□□□□ -1.66
GYPB-216ENST00000638448 EIF1AYO14602 144 aaKnown RBP4.67□□□□□ -1.66
GYPB-216ENST00000638448 CPNE3O75131 537 aaKnown RBP4.67□□□□□ -1.66
GYPB-216ENST00000638448 ACPPP15309 386 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 GLB1P16278 677 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 EPHA1P21709 976 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 ERCC5P28715 1186 aaPredicted RBP4.67□□□□□ -1.66
GYPB-216ENST00000638448 CDC27P30260 824 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 CDC25BP30305 580 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 RAD51AP2Q09MP3 1159 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.67□□□□□ -1.66
GYPB-216ENST00000638448 ZNF438Q7Z4V0 828 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 NCAPG2Q86XI2 1143 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 CACTIN-AS1Q8N1I8 211 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 TMEM130Q8N3G9 435 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 SLC43A3Q8NBI5 491 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 DCAF11Q8TEB1 546 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 SNX29Q8TEQ0 813 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 UBXN4Q92575 508 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 PSMG3-AS1Q96PY0 264 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 KRTAP9-2Q9BYQ4 174 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 MUC3BQ9H195 1237 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 ELP3Q9H9T3 547 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 USP35Q9P2H5 1018 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 AK5Q9Y6K8 562 aa4.67□□□□□ -1.66
GYPB-216ENST00000638448 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.67□□□□□ -1.66
GYPB-216ENST00000638448 LOC105371045A0A1W2PR82 267 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 A6NHS1 94 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 TM4SF5O14894 197 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 ZNF76P36508 570 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 NAALADL2Q58DX5 795 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 ACAD11Q709F0 780 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 CEP120Q8N960 986 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 TMEM87AQ8NBN3 555 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 RNF34Q969K3 372 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 ARMC5Q96C12 935 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 PBX4Q9BYU1 374 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 SH2B1Q9NRF2 756 aaPredicted RBP4.66□□□□□ -1.66
GYPB-216ENST00000638448 NLRP2Q9NX02 1062 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 KCNK4Q9NYG8 393 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 CNTN3Q9P232 1028 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 VTI1BQ9UEU0 232 aa4.66□□□□□ -1.66
GYPB-216ENST00000638448 HYAL3O43820 417 aaPredicted RBP4.65□□□□□ -1.67
GYPB-216ENST00000638448 TNFRSF21O75509 655 aa4.65□□□□□ -1.67
GYPB-216ENST00000638448 FSTP19883 344 aa4.65□□□□□ -1.67
GYPB-216ENST00000638448 CD68P34810 354 aaPredicted RBP4.65□□□□□ -1.67
GYPB-216ENST00000638448 ST13P50502 369 aaKnown RBP4.65□□□□□ -1.67
GYPB-216ENST00000638448 PTPN12Q05209 780 aaKnown RBP4.65□□□□□ -1.67
GYPB-216ENST00000638448 NT5DC4Q86YG4 428 aa4.65□□□□□ -1.67
GYPB-216ENST00000638448 HHIPQ96QV1 700 aa4.65□□□□□ -1.67
GYPB-216ENST00000638448 GGNBP2Q9H3C7 697 aa4.65□□□□□ -1.67
GYPB-216ENST00000638448 WWC3Q9ULE0 1092 aa4.65□□□□□ -1.67
GYPB-216ENST00000638448 FSCN2O14926 492 aa4.64□□□□□ -1.67
GYPB-216ENST00000638448 ADAM11O75078 769 aa4.64□□□□□ -1.67
GYPB-216ENST00000638448 PTPRAP18433 802 aa4.64□□□□□ -1.67
GYPB-216ENST00000638448 EIF4BP23588 611 aaKnown RBP4.64□□□□□ -1.67
GYPB-216ENST00000638448 ORC1Q13415 861 aa4.64□□□□□ -1.67
GYPB-216ENST00000638448 NBPF11Q86T75 865 aa4.64□□□□□ -1.67
GYPB-216ENST00000638448 C1orf127Q8N9H9 656 aa4.64□□□□□ -1.67
GYPB-216ENST00000638448 ANKRD24Q8TF21 1146 aa4.64□□□□□ -1.67
GYPB-216ENST00000638448 UBASH3BQ8TF42 649 aa4.64□□□□□ -1.67
GYPB-216ENST00000638448 PMEPA1Q969W9 287 aa4.64□□□□□ -1.67
GYPB-216ENST00000638448 FAM161BQ96MY7 647 aa4.64□□□□□ -1.67
GYPB-216ENST00000638448 UBL7Q96S82 380 aaPredicted RBP4.64□□□□□ -1.67
GYPB-216ENST00000638448 GMLQ99445 158 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms