RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 ABCC5O15440 1437 aa18.21■□□□□ 0.51
CLN5-208ENST00000636183 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.21■□□□□ 0.51
CLN5-208ENST00000636183 PAG1Q9NWQ8 432 aa18.21■□□□□ 0.51
CLN5-208ENST00000636183 STRN3Q13033 797 aa18.21■□□□□ 0.51
CLN5-208ENST00000636183 SKIV2LQ15477 1246 aaKnown RBP18.21■□□□□ 0.51
CLN5-208ENST00000636183 MAP7D1Q3KQU3 841 aa18.21■□□□□ 0.51
CLN5-208ENST00000636183 RARSP54136 660 aaKnown RBP18.21■□□□□ 0.51
CLN5-208ENST00000636183 TRPC3Q13507 836 aa18.21■□□□□ 0.51
CLN5-208ENST00000636183 SUPT20HQ8NEM7 779 aa18.21■□□□□ 0.51
CLN5-208ENST00000636183 CCDC114Q96M63 670 aa18.21■□□□□ 0.51
CLN5-208ENST00000636183 RXRAP19793 462 aa18.21■□□□□ 0.51
CLN5-208ENST00000636183 CUL4BQ13620 913 aa18.21■□□□□ 0.51
CLN5-208ENST00000636183 USH1GQ495M9 461 aa18.21■□□□□ 0.51
CLN5-208ENST00000636183 ZSWIM4Q9H7M6 989 aa18.21■□□□□ 0.51
CLN5-208ENST00000636183 SUPT6HQ7KZ85 1726 aaKnown RBP18.21■□□□□ 0.5
CLN5-208ENST00000636183 IFRD2Q12894 506 aaPredicted RBP18.21■□□□□ 0.5
CLN5-208ENST00000636183 PPP1R21Q6ZMI0 780 aa18.21■□□□□ 0.5
CLN5-208ENST00000636183 PCDH11XQ9BZA7 1347 aa18.2■□□□□ 0.5
CLN5-208ENST00000636183 PCDH11YQ9BZA8 1340 aa18.2■□□□□ 0.5
CLN5-208ENST00000636183 KRT2P35908 639 aa18.2■□□□□ 0.5
CLN5-208ENST00000636183 STX1AQ16623 288 aa18.2■□□□□ 0.5
CLN5-208ENST00000636183 MCMDC2Q4G0Z9 681 aa18.2■□□□□ 0.5
CLN5-208ENST00000636183 TTC30AQ86WT1 665 aa18.2■□□□□ 0.5
CLN5-208ENST00000636183 WDR44Q5JSH3 913 aa18.2■□□□□ 0.5
CLN5-208ENST00000636183 NSMFQ6X4W1 530 aa18.2■□□□□ 0.5
CLN5-208ENST00000636183 MAGI1Q96QZ7 1491 aaPredicted RBP18.2■□□□□ 0.5
CLN5-208ENST00000636183 MKRN3Q13064 507 aaKnown RBP18.2■□□□□ 0.5
CLN5-208ENST00000636183 SPATA24Q86W54 205 aa18.2■□□□□ 0.5
CLN5-208ENST00000636183 CCDC155Q8N6L0 562 aa18.2■□□□□ 0.5
CLN5-208ENST00000636183 FAM107BQ9H098 131 aa18.2■□□□□ 0.5
CLN5-208ENST00000636183 FAM193BQ96PV7 902 aaPredicted RBP18.2■□□□□ 0.5
CLN5-208ENST00000636183 TOPBP1Q92547 1522 aa18.2■□□□□ 0.5
CLN5-208ENST00000636183 ZBTB33Q86T24 672 aa18.2■□□□□ 0.5
CLN5-208ENST00000636183 TNPO1Q92973 898 aaKnown RBP18.2■□□□□ 0.5
CLN5-208ENST00000636183 IFT74Q96LB3 600 aa18.2■□□□□ 0.5
CLN5-208ENST00000636183 RNF216Q9NWF9 866 aaPredicted RBP18.2■□□□□ 0.5
CLN5-208ENST00000636183 RTL9Q8NET4 1388 aa18.19■□□□□ 0.5
CLN5-208ENST00000636183 C11orf95C9JLR9 678 aaPredicted RBP18.19■□□□□ 0.5
CLN5-208ENST00000636183 CEP135Q66GS9 1140 aa18.19■□□□□ 0.5
CLN5-208ENST00000636183 Q6ZUG5 572 aa18.19■□□□□ 0.5
CLN5-208ENST00000636183 RHPN1Q8TCX5 695 aa18.19■□□□□ 0.5
CLN5-208ENST00000636183 HMG20BQ9P0W2 317 aa18.19■□□□□ 0.5
CLN5-208ENST00000636183 PDE6BP35913 854 aa18.19■□□□□ 0.5
CLN5-208ENST00000636183 IRX5P78411 483 aaPredicted RBP18.19■□□□□ 0.5
CLN5-208ENST00000636183 C6orf163Q5TEZ5 329 aa18.19■□□□□ 0.5
CLN5-208ENST00000636183 AGTPBP1Q9UPW5 1226 aa18.19■□□□□ 0.5
CLN5-208ENST00000636183 ABCC11Q96J66 1382 aa18.19■□□□□ 0.5
CLN5-208ENST00000636183 HIBADHP31937 336 aaKnown RBP18.19■□□□□ 0.5
CLN5-208ENST00000636183 GNAT2P19087 354 aa18.19■□□□□ 0.5
CLN5-208ENST00000636183 CCDC14Q49A88 953 aa18.19■□□□□ 0.5
CLN5-208ENST00000636183 SLC5A4Q9NY91 659 aa18.19■□□□□ 0.5
CLN5-208ENST00000636183 SPDYE16A6NNV3 312 aaPredicted RBP18.18■□□□□ 0.5
CLN5-208ENST00000636183 TPD52P55327 224 aaPredicted RBP18.18■□□□□ 0.5
CLN5-208ENST00000636183 DLGAP5Q15398 846 aa18.18■□□□□ 0.5
CLN5-208ENST00000636183 SPDYE2Q495Y8 402 aa18.18■□□□□ 0.5
CLN5-208ENST00000636183 KRT19P08727 400 aa18.18■□□□□ 0.5
CLN5-208ENST00000636183 KIF18AQ8NI77 898 aa18.18■□□□□ 0.5
CLN5-208ENST00000636183 FANCAO15360 1455 aa18.18■□□□□ 0.5
CLN5-208ENST00000636183 CTR9Q6PD62 1173 aa18.18■□□□□ 0.5
CLN5-208ENST00000636183 METTL13Q8N6R0 699 aa18.18■□□□□ 0.5
CLN5-208ENST00000636183 STX10O60499 249 aa18.18■□□□□ 0.5
CLN5-208ENST00000636183 C4orf50Q6ZRC1 276 aa18.18■□□□□ 0.5
CLN5-208ENST00000636183 SELENOOQ9BVL4 669 aa18.18■□□□□ 0.5
CLN5-208ENST00000636183 KIF14Q15058 1648 aa18.18■□□□□ 0.5
CLN5-208ENST00000636183 CKAP4Q07065 602 aaKnown RBP18.17■□□□□ 0.5
CLN5-208ENST00000636183 RAPGEF1Q13905 1077 aa18.17■□□□□ 0.5
CLN5-208ENST00000636183 DDX12PQ92771 950 aa18.17■□□□□ 0.5
CLN5-208ENST00000636183 RASAL2Q9UJF2 1139 aa18.17■□□□□ 0.5
CLN5-208ENST00000636183 DENND2AQ9ULE3 1009 aa18.17■□□□□ 0.5
CLN5-208ENST00000636183 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.17■□□□□ 0.5
CLN5-208ENST00000636183 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
CLN5-208ENST00000636183 GNA11P29992 359 aa18.17■□□□□ 0.5
CLN5-208ENST00000636183 PPIP5K1Q6PFW1 1433 aa18.17■□□□□ 0.5
CLN5-208ENST00000636183 PSMA7O14818 248 aa18.17■□□□□ 0.5
CLN5-208ENST00000636183 SMTNP53814 917 aa18.17■□□□□ 0.5
CLN5-208ENST00000636183 ARHGEF6Q15052 776 aa18.17■□□□□ 0.5
CLN5-208ENST00000636183 PLCH2O75038 1416 aa18.17■□□□□ 0.5
CLN5-208ENST00000636183 E7EVH7 732 aa18.17■□□□□ 0.5
CLN5-208ENST00000636183 SULF1Q8IWU6 871 aa18.17■□□□□ 0.5
CLN5-208ENST00000636183 PRIM1P49642 420 aaKnown RBP18.16■□□□□ 0.5
CLN5-208ENST00000636183 LETM2Q2VYF4 491 aa18.16■□□□□ 0.5
CLN5-208ENST00000636183 KSR2Q6VAB6 950 aa18.16■□□□□ 0.5
CLN5-208ENST00000636183 FRMD4BQ9Y2L6 1034 aa18.16■□□□□ 0.5
CLN5-208ENST00000636183 ATP6V0A2Q9Y487 856 aa18.16■□□□□ 0.5
CLN5-208ENST00000636183 GOLGA6L9A6NEM1 432 aa18.16■□□□□ 0.5
CLN5-208ENST00000636183 DNM2P50570 870 aa18.16■□□□□ 0.5
CLN5-208ENST00000636183 CEP112Q8N8E3 955 aa18.16■□□□□ 0.5
CLN5-208ENST00000636183 CGNQ9P2M7 1197 aaKnown RBP18.16■□□□□ 0.5
CLN5-208ENST00000636183 NR1I2O75469 434 aa18.16■□□□□ 0.5
CLN5-208ENST00000636183 CWF19L2Q2TBE0 894 aaKnown RBP18.16■□□□□ 0.5
CLN5-208ENST00000636183 FAM89AQ96GI7 184 aa18.16■□□□□ 0.5
CLN5-208ENST00000636183 POLR3GO15318 223 aaPredicted RBP18.16■□□□□ 0.5
CLN5-208ENST00000636183 CALML3P27482 149 aa18.16■□□□□ 0.5
CLN5-208ENST00000636183 ATP2A1O14983 1001 aa18.15■□□□□ 0.5
CLN5-208ENST00000636183 TFCP2Q12800 502 aa18.15■□□□□ 0.5
CLN5-208ENST00000636183 DDX17Q92841 729 aaKnown RBP18.15■□□□□ 0.5
CLN5-208ENST00000636183 USP48Q86UV5 1035 aa18.15■□□□□ 0.5
CLN5-208ENST00000636183 IRAK4Q9NWZ3 460 aa18.15■□□□□ 0.5
CLN5-208ENST00000636183 BMP15O95972 392 aa18.15■□□□□ 0.5
CLN5-208ENST00000636183 TRIM27P14373 513 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms