RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 BEND7Q8N7W2 519 aaPredicted RBP3.75□□□□□ -1.81
CD46-219ENST00000636114 SCARF2Q96GP6 870 aaPredicted RBP3.75□□□□□ -1.81
CD46-219ENST00000636114 NLRP2Q9NX02 1062 aa3.75□□□□□ -1.81
CD46-219ENST00000636114 CCDC9Q9Y3X0 531 aaKnown RBP3.75□□□□□ -1.81
CD46-219ENST00000636114 URB2Q14146 1524 aaKnown RBP3.75□□□□□ -1.81
CD46-219ENST00000636114 RAD54L2Q9Y4B4 1467 aa3.75□□□□□ -1.81
CD46-219ENST00000636114 NID1P14543 1247 aa3.75□□□□□ -1.81
CD46-219ENST00000636114 COL9A3Q14050 684 aaPredicted RBP3.75□□□□□ -1.81
CD46-219ENST00000636114 GRIK5Q16478 980 aa3.75□□□□□ -1.81
CD46-219ENST00000636114 KIAA0319Q5VV43 1072 aa3.75□□□□□ -1.81
CD46-219ENST00000636114 LINC00114Q6XXX2 140 aa3.75□□□□□ -1.81
CD46-219ENST00000636114 TMEM102Q8N9M5 508 aaPredicted RBP3.75□□□□□ -1.81
CD46-219ENST00000636114 EPS8L3Q8TE67 593 aaKnown RBP3.75□□□□□ -1.81
CD46-219ENST00000636114 BHLHE41Q9C0J9 482 aaPredicted RBP3.75□□□□□ -1.81
CD46-219ENST00000636114 TRIM33Q9UPN9 1127 aa3.75□□□□□ -1.81
CD46-219ENST00000636114 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.74□□□□□ -1.81
CD46-219ENST00000636114 A0A1W2PP55 124 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 SPDYE3A6NKU9 549 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 FAM177BA6PVY3 158 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 RNF225M0QZC1 329 aaPredicted RBP3.74□□□□□ -1.81
CD46-219ENST00000636114 NFKBIEO00221 500 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 GADD45BO75293 160 aaPredicted RBP3.74□□□□□ -1.81
CD46-219ENST00000636114 PRPF40AO75400 957 aaKnown RBP3.74□□□□□ -1.81
CD46-219ENST00000636114 PTPRAP18433 802 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 IRS1P35568 1242 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.74□□□□□ -1.81
CD46-219ENST00000636114 GDF6Q6KF10 455 aaPredicted RBP3.74□□□□□ -1.81
CD46-219ENST00000636114 TRIM11Q96F44 468 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 POP1Q99575 1024 aaKnown RBP3.74□□□□□ -1.81
CD46-219ENST00000636114 NOP53Q9NZM5 478 aaKnown RBP3.74□□□□□ -1.81
CD46-219ENST00000636114 MRC2Q9UBG0 1479 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 CCNB3Q8WWL7 1395 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 TTBK1Q5TCY1 1321 aaPredicted RBP3.74□□□□□ -1.81
CD46-219ENST00000636114 CNTNAP5Q8WYK1 1306 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 ABCA5Q8WWZ7 1642 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 TRPA1O75762 1119 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 MSL1Q68DK7 614 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 FBXO33Q7Z6M2 555 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 WFDC8Q8IUA0 241 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 CCNJLQ8IV13 435 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 IL22RA1Q8N6P7 574 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 NXPE3Q969Y0 559 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 HHIPQ96QV1 700 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 LACRTQ9GZZ8 138 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 EHD4Q9H223 541 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 SUV39H2Q9H5I1 410 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 LIN7BQ9HAP6 207 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 PODXL2Q9NZ53 605 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 WWC3Q9ULE0 1092 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 TRAK1Q9UPV9 953 aa3.74□□□□□ -1.81
CD46-219ENST00000636114 FYCO1Q9BQS8 1478 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 CASKIN1Q8WXD9 1431 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 TIAM1Q13009 1591 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 BAG6P46379 1132 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 PRPF40BQ6NWY9 871 aaKnown RBP3.73□□□□□ -1.81
CD46-219ENST00000636114 PI16Q6UXB8 463 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 DTWD1Q8N5C7 304 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 SETDB2Q96T68 719 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 TCF12Q99081 682 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 BCL2L13Q9BXK5 485 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 ADAM19Q9H013 955 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 MUC3BQ9H195 1237 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 SPG7Q9UQ90 795 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 LRRC9Q6ZRR7 1453 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 IFT140Q96RY7 1462 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 CTTNBP2Q8WZ74 1663 aa3.73□□□□□ -1.81
CD46-219ENST00000636114 CDC27P30260 824 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 GNA15P30679 374 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 CABP4P57796 275 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 GRM2Q14416 872 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 DMRTC2Q8IXT2 367 aaPredicted RBP3.72□□□□□ -1.81
CD46-219ENST00000636114 ASAP3Q8TDY4 903 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 BSNDQ8WZ55 320 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 FRMD6Q96NE9 622 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 PLVAPQ9BX97 442 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 SRCIN1Q9C0H9 1055 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 SRA1Q9HD15 236 aaKnown RBP3.72□□□□□ -1.81
CD46-219ENST00000636114 SOX13Q9UN79 622 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 PPME1Q9Y570 386 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 TDRD9Q8NDG6 1382 aaKnown RBP3.72□□□□□ -1.81
CD46-219ENST00000636114 GRIN2BQ13224 1484 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 GIPC1O14908 333 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 EPHA1P21709 976 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 RAC1P63000 192 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 TRAPPC3LQ5T215 181 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 ADAMTSL4Q6UY14 1074 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 ALYREFQ86V81 257 aaKnown RBP3.72□□□□□ -1.81
CD46-219ENST00000636114 MAP4K3Q8IVH8 894 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 DUSP9Q99956 384 aaKnown RBP3.72□□□□□ -1.81
CD46-219ENST00000636114 BCO2Q9BYV7 579 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 ABCB6Q9NP58 842 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 PPP4R2Q9NY27 417 aa3.72□□□□□ -1.81
CD46-219ENST00000636114 TARBP1Q13395 1621 aaKnown RBP3.72□□□□□ -1.81
CD46-219ENST00000636114 THOC2Q8NI27 1593 aaKnown RBP3.72□□□□□ -1.81
CD46-219ENST00000636114 A0A096LPE4 126 aa3.71□□□□□ -1.82
CD46-219ENST00000636114 A0A1W2PPZ6 126 aa3.71□□□□□ -1.82
CD46-219ENST00000636114 METTL12A8MUP2 240 aa3.71□□□□□ -1.82
CD46-219ENST00000636114 GRIA4P48058 902 aa3.71□□□□□ -1.82
CD46-219ENST00000636114 ZNF326Q5BKZ1 582 aaKnown RBP3.71□□□□□ -1.82
CD46-219ENST00000636114 PRRT3Q5FWE3 981 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms