RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PCDHAC2Q9Y5I4 1007 aa23.53■■□□□ 1.36
CLN6-212ENST00000636020 LAMA3Q16787 3333 aa23.52■■□□□ 1.36
CLN6-212ENST00000636020 KLRK1P26718 216 aa23.52■■□□□ 1.36
CLN6-212ENST00000636020 SH3TC2Q8TF17 1288 aa23.52■■□□□ 1.36
CLN6-212ENST00000636020 GREM2Q9H772 168 aa23.52■■□□□ 1.36
CLN6-212ENST00000636020 ZFYVE28Q9HCC9 887 aa23.52■■□□□ 1.36
CLN6-212ENST00000636020 TAF1CQ15572 869 aaPredicted RBP23.51■■□□□ 1.35
CLN6-212ENST00000636020 NEUROD2Q15784 382 aa23.51■■□□□ 1.35
CLN6-212ENST00000636020 BRI3BPQ8WY22 251 aa23.51■■□□□ 1.35
CLN6-212ENST00000636020 DPF3Q92784 378 aa23.51■■□□□ 1.35
CLN6-212ENST00000636020 OPTNQ96CV9 577 aa23.51■■□□□ 1.35
CLN6-212ENST00000636020 CLRN2A0PK11 232 aa23.5■■□□□ 1.35
CLN6-212ENST00000636020 CERS5Q8N5B7 392 aa23.5■■□□□ 1.35
CLN6-212ENST00000636020 TRIM35Q9UPQ4 493 aa23.5■■□□□ 1.35
CLN6-212ENST00000636020 SHISA4Q96DD7 197 aa23.49■■□□□ 1.35
CLN6-212ENST00000636020 METTL22Q9BUU2 404 aaPredicted RBP23.49■■□□□ 1.35
CLN6-212ENST00000636020 ELP3Q9H9T3 547 aa23.49■■□□□ 1.35
CLN6-212ENST00000636020 SPEF2Q9C093 1822 aa23.48■■□□□ 1.35
CLN6-212ENST00000636020 SPDYE2BA6NHP3 402 aa23.48■■□□□ 1.35
CLN6-212ENST00000636020 MYO1BO43795 1136 aa23.48■■□□□ 1.35
CLN6-212ENST00000636020 SPDYE6P0CI01 402 aa23.48■■□□□ 1.35
CLN6-212ENST00000636020 PRMT6Q96LA8 375 aaPredicted RBP23.48■■□□□ 1.35
CLN6-212ENST00000636020 CD209Q9NNX6 404 aa23.48■■□□□ 1.35
CLN6-212ENST00000636020 AOX1Q06278 1338 aa23.48■■□□□ 1.35
CLN6-212ENST00000636020 ECM29Q5VYK3 1845 aa23.47■■□□□ 1.35
CLN6-212ENST00000636020 RASA3Q14644 834 aa23.47■■□□□ 1.35
CLN6-212ENST00000636020 CFAP100Q494V2 611 aa23.47■■□□□ 1.35
CLN6-212ENST00000636020 ARHGAP39Q9C0H5 1083 aa23.47■■□□□ 1.35
CLN6-212ENST00000636020 VEZTQ9HBM0 779 aa23.47■■□□□ 1.35
CLN6-212ENST00000636020 CCL15-CCL14A0A0B4J2E2 113 aa23.46■■□□□ 1.35
CLN6-212ENST00000636020 CCL15Q16663 113 aa23.46■■□□□ 1.35
CLN6-212ENST00000636020 FAM43AQ8N2R8 423 aa23.46■■□□□ 1.35
CLN6-212ENST00000636020 CNKSR2Q8WXI2 1034 aa23.46■■□□□ 1.35
CLN6-212ENST00000636020 ANKRD2Q9GZV1 360 aa23.46■■□□□ 1.35
CLN6-212ENST00000636020 GTF2A2P52657 109 aa23.45■■□□□ 1.34
CLN6-212ENST00000636020 IGHMBP2P38935 993 aaKnown RBP23.44■■□□□ 1.34
CLN6-212ENST00000636020 LACTBP83111 547 aaPredicted RBP23.44■■□□□ 1.34
CLN6-212ENST00000636020 MTFR1Q15390 333 aa23.44■■□□□ 1.34
CLN6-212ENST00000636020 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.44■■□□□ 1.34
CLN6-212ENST00000636020 UBE2Q1Q7Z7E8 422 aa23.44■■□□□ 1.34
CLN6-212ENST00000636020 OTOFQ9HC10 1997 aa23.43■■□□□ 1.34
CLN6-212ENST00000636020 F8W031 263 aaPredicted RBP23.43■■□□□ 1.34
CLN6-212ENST00000636020 GNRH1P01148 92 aa23.43■■□□□ 1.34
CLN6-212ENST00000636020 MNX1P50219 401 aaPredicted RBP23.43■■□□□ 1.34
CLN6-212ENST00000636020 PRMT2P55345 433 aa23.43■■□□□ 1.34
CLN6-212ENST00000636020 KIF22Q14807 665 aa23.43■■□□□ 1.34
CLN6-212ENST00000636020 MYH3P11055 1940 aa23.42■■□□□ 1.34
CLN6-212ENST00000636020 TLR2O60603 784 aa23.42■■□□□ 1.34
CLN6-212ENST00000636020 IGKV5-2P06315 115 aa23.42■■□□□ 1.34
CLN6-212ENST00000636020 CCDC146Q8IYE0 955 aa23.42■■□□□ 1.34
CLN6-212ENST00000636020 HTATIP2Q9BUP3 242 aa23.42■■□□□ 1.34
CLN6-212ENST00000636020 MBIPQ9NS73 344 aa23.42■■□□□ 1.34
CLN6-212ENST00000636020 ZSWIM8A7E2V4 1837 aa23.42■■□□□ 1.34
CLN6-212ENST00000636020 IRS2Q9Y4H2 1338 aa23.41■■□□□ 1.34
CLN6-212ENST00000636020 NKX2-3Q8TAU0 364 aa23.41■■□□□ 1.34
CLN6-212ENST00000636020 MAP3K2Q9Y2U5 619 aa23.41■■□□□ 1.34
CLN6-212ENST00000636020 NR2E3Q9Y5X4 410 aa23.41■■□□□ 1.34
CLN6-212ENST00000636020 A0A1W2PPC1 479 aa23.4■■□□□ 1.34
CLN6-212ENST00000636020 SOX1O00570 391 aaPredicted RBP23.4■■□□□ 1.34
CLN6-212ENST00000636020 DDX58O95786 925 aaKnown RBP23.4■■□□□ 1.34
CLN6-212ENST00000636020 FKBP1AP62942 108 aaKnown RBP23.4■■□□□ 1.34
CLN6-212ENST00000636020 ZBTB7BO15156 539 aaPredicted RBP23.39■■□□□ 1.33
CLN6-212ENST00000636020 WDHD1O75717 1129 aaPredicted RBP23.39■■□□□ 1.33
CLN6-212ENST00000636020 KCNJ4P48050 445 aa23.39■■□□□ 1.33
CLN6-212ENST00000636020 GJA8P48165 433 aa23.39■■□□□ 1.33
CLN6-212ENST00000636020 MAP3K9P80192 1104 aa23.39■■□□□ 1.33
CLN6-212ENST00000636020 VGLL4Q14135 290 aa23.39■■□□□ 1.33
CLN6-212ENST00000636020 TEPSINQ96N21 525 aa23.39■■□□□ 1.33
CLN6-212ENST00000636020 ELL2O00472 640 aaPredicted RBP23.38■■□□□ 1.33
CLN6-212ENST00000636020 RBM5P52756 815 aaKnown RBP eCLIP23.38■■□□□ 1.33
CLN6-212ENST00000636020 CHRNDQ07001 517 aa23.38■■□□□ 1.33
CLN6-212ENST00000636020 TNFAIP1Q13829 316 aa23.38■■□□□ 1.33
CLN6-212ENST00000636020 C15orf52Q6ZUT6 534 aaKnown RBP23.38■■□□□ 1.33
CLN6-212ENST00000636020 CDAN1Q8IWY9 1227 aa23.38■■□□□ 1.33
CLN6-212ENST00000636020 MPHOSPH8Q99549 860 aa23.38■■□□□ 1.33
CLN6-212ENST00000636020 ZCCHC17Q9NP64 241 aaKnown RBP23.38■■□□□ 1.33
CLN6-212ENST00000636020 SNAP23O00161 211 aa23.37■■□□□ 1.33
CLN6-212ENST00000636020 GJB1P08034 283 aa23.37■■□□□ 1.33
CLN6-212ENST00000636020 IL1R1P14778 569 aa23.37■■□□□ 1.33
CLN6-212ENST00000636020 ITGA6P23229 1130 aa23.37■■□□□ 1.33
CLN6-212ENST00000636020 SPDYE2Q495Y8 402 aa23.37■■□□□ 1.33
CLN6-212ENST00000636020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.37■■□□□ 1.33
CLN6-212ENST00000636020 LRCH3Q96II8 777 aa23.37■■□□□ 1.33
CLN6-212ENST00000636020 ZNF70Q9UC06 446 aaPredicted RBP23.37■■□□□ 1.33
CLN6-212ENST00000636020 BTBD19C9JJ37 291 aa23.36■■□□□ 1.33
CLN6-212ENST00000636020 ZNF853P0CG23 659 aa23.36■■□□□ 1.33
CLN6-212ENST00000636020 SRRDQ9UH36 339 aa23.36■■□□□ 1.33
CLN6-212ENST00000636020 CSADQ9Y600 493 aa23.36■■□□□ 1.33
CLN6-212ENST00000636020 UNC80Q8N2C7 3258 aa23.36■■□□□ 1.33
CLN6-212ENST00000636020 H7C1W4 665 aa23.35■■□□□ 1.33
CLN6-212ENST00000636020 CETPP11597 493 aa23.35■■□□□ 1.33
CLN6-212ENST00000636020 CTGFP29279 349 aa23.35■■□□□ 1.33
CLN6-212ENST00000636020 KSR2Q6VAB6 950 aa23.35■■□□□ 1.33
CLN6-212ENST00000636020 RUNDC1Q96C34 613 aa23.35■■□□□ 1.33
CLN6-212ENST00000636020 PI4KAP2A4QPH2 592 aa23.34■■□□□ 1.33
CLN6-212ENST00000636020 SPDYE5A6NIY4 337 aa23.34■■□□□ 1.33
CLN6-212ENST00000636020 CCL5P13501 91 aa23.34■■□□□ 1.33
CLN6-212ENST00000636020 GRK4P32298 578 aa23.34■■□□□ 1.33
CLN6-212ENST00000636020 C17orf99Q6UX52 265 aa23.34■■□□□ 1.33
CLN6-212ENST00000636020 UBE3BQ7Z3V4 1068 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms