RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 PHACTR1Q9C0D0 580 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 TAOK3Q9H2K8 898 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 DDX19AQ9NUU7 478 aaKnown RBP6.93□□□□□ -1.3
CHD2-221ENST00000635856 BAIAP2L1Q9UHR4 511 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 RABL2BQ9UNT1 228 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 RTEL1-TNFRSF6BF6WH68 1400 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 LRRC9Q6ZRR7 1453 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 ARAP1Q96P48 1450 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 ADAMTS12P58397 1594 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 MEFVO15553 781 aaPredicted RBP6.93□□□□□ -1.3
CHD2-221ENST00000635856 GCLCP48506 637 aaPredicted RBP6.93□□□□□ -1.3
CHD2-221ENST00000635856 PPFIA1Q13136 1202 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 MPP3Q13368 585 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 APBB1IPQ7Z5R6 666 aaPredicted RBP6.93□□□□□ -1.3
CHD2-221ENST00000635856 APLFQ8IW19 511 aaPredicted RBP6.93□□□□□ -1.3
CHD2-221ENST00000635856 IQCF2Q8IXL9 164 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 ATP11CQ8NB49 1132 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 PPP1R13BQ96KQ4 1090 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 UBXN6Q9BZV1 441 aa6.93□□□□□ -1.3
CHD2-221ENST00000635856 TPX2Q9ULW0 747 aaKnown RBP6.93□□□□□ -1.3
CHD2-221ENST00000635856 ABCA5Q8WWZ7 1642 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 RTN2O75298 545 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 PARP1P09874 1014 aaKnown RBP6.92□□□□□ -1.3
CHD2-221ENST00000635856 CHMP4BP1P59074 171 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 SLC4A8Q2Y0W8 1093 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 NAA16Q6N069 864 aaPredicted RBP6.92□□□□□ -1.3
CHD2-221ENST00000635856 CKAP2LQ8IYA6 745 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 GORASP1Q9BQQ3 440 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 YIPF2Q9BWQ6 316 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 VCX3BQ9H321 246 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 ZSWIM4Q9H7M6 989 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 VCX3AQ9NNX9 186 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 LUC7LQ9NQ29 371 aaKnown RBP6.92□□□□□ -1.3
CHD2-221ENST00000635856 IMPACTQ9P2X3 320 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 ITGB1BP2Q9UKP3 347 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 IQSEC3Q9UPP2 1182 aaPredicted RBP6.92□□□□□ -1.3
CHD2-221ENST00000635856 THOC2Q8NI27 1593 aaKnown RBP6.92□□□□□ -1.3
CHD2-221ENST00000635856 RASSF10A6NK89 507 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 MYO1BO43795 1136 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 FSBPO95073 299 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 GNGT1P63211 74 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 CCHCR1Q8TD31 782 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 BHMTQ93088 406 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 CHAMP1Q96JM3 812 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 UIMC1Q96RL1 719 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 ZNF644Q9H582 1327 aaPredicted RBP6.92□□□□□ -1.3
CHD2-221ENST00000635856 ST20-MTHFSA0A0A6YYL1 179 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 KRT85P78386 507 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 FOXD4Q12950 439 aaPredicted RBP6.92□□□□□ -1.3
CHD2-221ENST00000635856 NBPF15Q8N660 670 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 RBM41Q96IZ5 413 aaKnown RBP6.92□□□□□ -1.3
CHD2-221ENST00000635856 EPAS1Q99814 870 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 VCXQ9H320 206 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 TRPC6Q9Y210 931 aa6.92□□□□□ -1.3
CHD2-221ENST00000635856 ERBB3P21860 1342 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 WDHD1O75717 1129 aaPredicted RBP6.91□□□□□ -1.3
CHD2-221ENST00000635856 PLA2G4DQ86XP0 818 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 MAB21L3Q8N8X9 362 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 SAMM50Q9Y512 469 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 HFM1A2PYH4 1435 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.91□□□□□ -1.3
CHD2-221ENST00000635856 DYTNA2CJ06 578 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 HDGFP51858 240 aaKnown RBP6.91□□□□□ -1.3
CHD2-221ENST00000635856 POLE2P56282 527 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 DRP2Q13474 957 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 CUL5Q93034 780 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 HELLSQ9NRZ9 838 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 HDAC6Q9UBN7 1215 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 ATP8A1Q9Y2Q0 1164 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 ZDHHC9Q9Y397 364 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 PARD3Q8TEW0 1356 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 ZNF24P17028 368 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 NLRP5P59047 1200 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 MECOMQ03112 1051 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 MYO1EQ12965 1108 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 CASP8Q14790 479 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 CCDC12Q8WUD4 166 aaPredicted RBP6.91□□□□□ -1.3
CHD2-221ENST00000635856 RABEP2Q9H5N1 569 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 DNAAF2Q9NVR5 837 aaKnown RBP6.91□□□□□ -1.3
CHD2-221ENST00000635856 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.91□□□□□ -1.3
CHD2-221ENST00000635856 CORO1CQ9ULV4 474 aaPredicted RBP6.91□□□□□ -1.3
CHD2-221ENST00000635856 WDR37Q9Y2I8 494 aa6.91□□□□□ -1.3
CHD2-221ENST00000635856 VPS37CA5D8V6 355 aaPredicted RBP6.9□□□□□ -1.3
CHD2-221ENST00000635856 RARSP54136 660 aaKnown RBP6.9□□□□□ -1.3
CHD2-221ENST00000635856 AKAP17AQ02040 695 aaKnown RBP6.9□□□□□ -1.3
CHD2-221ENST00000635856 SPECC1Q5M775 1068 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 AFAP1Q8N556 730 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 CCDC148Q8NFR7 591 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 OR8K1Q8NGG5 319 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 LZICQ8WZA0 190 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 SYTL4Q96C24 671 aaPredicted RBP6.9□□□□□ -1.3
CHD2-221ENST00000635856 EXOC1Q9NV70 894 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 HYPKQ9NX55 129 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 HECW1Q76N89 1606 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 NUP160Q12769 1436 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 ZSCAN22P10073 491 aaPredicted RBP6.9□□□□□ -1.3
CHD2-221ENST00000635856 SF3B2Q13435 895 aaKnown RBP6.9□□□□□ -1.3
CHD2-221ENST00000635856 TUBB2AQ13885 445 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 NANOGNBQ7Z5D8 188 aa6.9□□□□□ -1.3
CHD2-221ENST00000635856 MAGEC3Q8TD91 643 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms