RNA–Protein interactions for RNA: ENST00000627746.2

PPP4C-214, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 5 BASIC

Gene PPP4C, Length 1,301 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-214ENST00000627746 HDAC9Q9UKV0 1011 aa29.4■■■□□ 2.3
PPP4C-214ENST00000627746 VGLL2Q8N8G2 317 aa29.39■■■□□ 2.3
PPP4C-214ENST00000627746 TDRD7Q8NHU6 1098 aaKnown RBP29.39■■■□□ 2.3
PPP4C-214ENST00000627746 HHIPL1Q96JK4 782 aa29.39■■■□□ 2.3
PPP4C-214ENST00000627746 LRRFIP2Q9Y608 721 aaKnown RBP29.39■■■□□ 2.3
PPP4C-214ENST00000627746 PDE8BO95263 885 aa29.38■■■□□ 2.29
PPP4C-214ENST00000627746 MAP2K1Q02750 393 aaPredicted RBP29.38■■■□□ 2.29
PPP4C-214ENST00000627746 ARHGAP45Q92619 1136 aa29.38■■■□□ 2.29
PPP4C-214ENST00000627746 ZIC5Q96T25 663 aa29.38■■■□□ 2.29
PPP4C-214ENST00000627746 IQSEC3Q9UPP2 1182 aaPredicted RBP29.38■■■□□ 2.29
PPP4C-214ENST00000627746 KIF16BQ96L93 1317 aa29.37■■■□□ 2.29
PPP4C-214ENST00000627746 PITPNM2Q9BZ72 1349 aa29.37■■■□□ 2.29
PPP4C-214ENST00000627746 PTPN12Q05209 780 aaKnown RBP29.37■■■□□ 2.29
PPP4C-214ENST00000627746 MOB2Q70IA6 237 aa29.36■■■□□ 2.29
PPP4C-214ENST00000627746 ZBED3Q96IU2 234 aaPredicted RBP29.36■■■□□ 2.29
PPP4C-214ENST00000627746 EYA2O00167 538 aa29.35■■■□□ 2.29
PPP4C-214ENST00000627746 INTS3Q68E01 1043 aaKnown RBP29.35■■■□□ 2.29
PPP4C-214ENST00000627746 FBXO33Q7Z6M2 555 aa29.35■■■□□ 2.29
PPP4C-214ENST00000627746 SIL1Q9H173 461 aa29.35■■■□□ 2.29
PPP4C-214ENST00000627746 TRIM27P14373 513 aa29.34■■■□□ 2.29
PPP4C-214ENST00000627746 MAP2K2P36507 400 aa29.34■■■□□ 2.29
PPP4C-214ENST00000627746 CTCFP49711 727 aaPredicted RBP29.34■■■□□ 2.29
PPP4C-214ENST00000627746 LBX1P52954 281 aa29.34■■■□□ 2.29
PPP4C-214ENST00000627746 DLGAP5Q15398 846 aa29.34■■■□□ 2.29
PPP4C-214ENST00000627746 RGMBQ6NW40 437 aa29.34■■■□□ 2.29
PPP4C-214ENST00000627746 CLUAP1Q96AJ1 413 aa29.34■■■□□ 2.29
PPP4C-214ENST00000627746 FAM205AQ6ZU69 1335 aa29.33■■■□□ 2.29
PPP4C-214ENST00000627746 THSD7BQ9C0I4 1608 aa29.33■■■□□ 2.29
PPP4C-214ENST00000627746 MMP14P50281 582 aa29.33■■■□□ 2.29
PPP4C-214ENST00000627746 BCAMP50895 628 aa29.33■■■□□ 2.29
PPP4C-214ENST00000627746 CFAP100Q494V2 611 aa29.33■■■□□ 2.29
PPP4C-214ENST00000627746 ATG9AQ7Z3C6 839 aa29.33■■■□□ 2.29
PPP4C-214ENST00000627746 VPS37DQ86XT2 251 aa29.33■■■□□ 2.29
PPP4C-214ENST00000627746 AOX1Q06278 1338 aa29.32■■■□□ 2.28
PPP4C-214ENST00000627746 FKBP1AP62942 108 aaKnown RBP29.32■■■□□ 2.28
PPP4C-214ENST00000627746 MFSD14BQ5SR56 506 aa29.32■■■□□ 2.28
PPP4C-214ENST00000627746 TNS4Q8IZW8 715 aa29.32■■■□□ 2.28
PPP4C-214ENST00000627746 TSKSQ9UJT2 592 aa29.32■■■□□ 2.28
PPP4C-214ENST00000627746 PA2G4Q9UQ80 394 aaKnown RBP29.32■■■□□ 2.28
PPP4C-214ENST00000627746 IPO8O15397 1037 aaKnown RBP29.31■■■□□ 2.28
PPP4C-214ENST00000627746 ZNF157P51786 506 aaPredicted RBP29.31■■■□□ 2.28
PPP4C-214ENST00000627746 CHAF1AQ13111 956 aaPredicted RBP29.31■■■□□ 2.28
PPP4C-214ENST00000627746 GRIK5Q16478 980 aa29.31■■■□□ 2.28
PPP4C-214ENST00000627746 ATF7IPQ6VMQ6 1270 aa29.31■■■□□ 2.28
PPP4C-214ENST00000627746 PRMT6Q96LA8 375 aaPredicted RBP29.31■■■□□ 2.28
PPP4C-214ENST00000627746 FAM155AB1AL88 458 aaPredicted RBP29.3■■■□□ 2.28
PPP4C-214ENST00000627746 HSPA8P11142 646 aaKnown RBP29.3■■■□□ 2.28
PPP4C-214ENST00000627746 FGFR2P21802 821 aa29.3■■■□□ 2.28
PPP4C-214ENST00000627746 RBM5P52756 815 aaKnown RBP eCLIP29.3■■■□□ 2.28
PPP4C-214ENST00000627746 CAVIN4Q5BKX8 364 aa29.3■■■□□ 2.28
PPP4C-214ENST00000627746 CLRN2A0PK11 232 aa29.29■■■□□ 2.28
PPP4C-214ENST00000627746 PUM3Q15397 648 aaKnown RBP29.29■■■□□ 2.28
PPP4C-214ENST00000627746 BEGAINQ9BUH8 593 aa29.29■■■□□ 2.28
PPP4C-214ENST00000627746 UBE2Q2LH0YL09 131 aa29.28■■■□□ 2.28
PPP4C-214ENST00000627746 FRAT2O75474 233 aaPredicted RBP29.28■■■□□ 2.28
PPP4C-214ENST00000627746 MTMR14Q8NCE2 650 aa29.28■■■□□ 2.28
PPP4C-214ENST00000627746 TTF2Q9UNY4 1162 aaKnown RBP29.28■■■□□ 2.28
PPP4C-214ENST00000627746 IFIT1P09914 478 aaKnown RBP29.27■■■□□ 2.28
PPP4C-214ENST00000627746 PRKG1Q13976 671 aa29.27■■■□□ 2.28
PPP4C-214ENST00000627746 SPDYE2BA6NHP3 402 aa29.26■■■□□ 2.27
PPP4C-214ENST00000627746 SPDYE6P0CI01 402 aa29.26■■■□□ 2.27
PPP4C-214ENST00000627746 NOGQ13253 232 aa29.26■■■□□ 2.27
PPP4C-214ENST00000627746 TTLL12Q14166 644 aaPredicted RBP29.26■■■□□ 2.27
PPP4C-214ENST00000627746 APOBEC3FQ8IUX4 373 aaKnown RBP29.26■■■□□ 2.27
PPP4C-214ENST00000627746 PRDM10Q9NQV6 1147 aa29.26■■■□□ 2.27
PPP4C-214ENST00000627746 HDAC5Q9UQL6 1122 aa29.26■■■□□ 2.27
PPP4C-214ENST00000627746 GNAI3P08754 354 aa29.25■■■□□ 2.27
PPP4C-214ENST00000627746 CCDC102AQ96A19 550 aa29.25■■■□□ 2.27
PPP4C-214ENST00000627746 FZD1Q9UP38 647 aa29.25■■■□□ 2.27
PPP4C-214ENST00000627746 KIF23Q02241 960 aaPredicted RBP29.24■■■□□ 2.27
PPP4C-214ENST00000627746 ZKSCAN2Q63HK3 967 aa29.24■■■□□ 2.27
PPP4C-214ENST00000627746 TMEM57Q8N5G2 664 aa29.24■■■□□ 2.27
PPP4C-214ENST00000627746 DEFB129Q9H1M3 183 aa29.24■■■□□ 2.27
PPP4C-214ENST00000627746 VEZTQ9HBM0 779 aa29.24■■■□□ 2.27
PPP4C-214ENST00000627746 CIAO1O76071 339 aa29.23■■■□□ 2.27
PPP4C-214ENST00000627746 SLC5A1P13866 664 aa29.23■■■□□ 2.27
PPP4C-214ENST00000627746 LPIN2Q92539 896 aa29.23■■■□□ 2.27
PPP4C-214ENST00000627746 CEP126Q9P2H0 1117 aa29.23■■■□□ 2.27
PPP4C-214ENST00000627746 PAPPA2Q9BXP8 1791 aa29.22■■■□□ 2.27
PPP4C-214ENST00000627746 SRGAP3O43295 1099 aa29.22■■■□□ 2.27
PPP4C-214ENST00000627746 FKBP1BP68106 108 aa29.22■■■□□ 2.27
PPP4C-214ENST00000627746 ZBED9Q6R2W3 1325 aa29.22■■■□□ 2.27
PPP4C-214ENST00000627746 MYO1BO43795 1136 aa29.21■■■□□ 2.27
PPP4C-214ENST00000627746 CAPN15O75808 1086 aa29.21■■■□□ 2.27
PPP4C-214ENST00000627746 SLC10A3P09131 477 aa29.21■■■□□ 2.27
PPP4C-214ENST00000627746 COPRSQ9NQ92 184 aa29.21■■■□□ 2.27
PPP4C-214ENST00000627746 NF2P35240 595 aa29.2■■■□□ 2.27
PPP4C-214ENST00000627746 IL15P40933 162 aaPredicted RBP29.2■■■□□ 2.27
PPP4C-214ENST00000627746 ATP2B3Q16720 1220 aa29.2■■■□□ 2.27
PPP4C-214ENST00000627746 RASAL3Q86YV0 1011 aa29.2■■■□□ 2.27
PPP4C-214ENST00000627746 TDRD3Q9H7E2 651 aaKnown RBP29.2■■■□□ 2.27
PPP4C-214ENST00000627746 SERPINA10Q9UK55 444 aa29.2■■■□□ 2.27
PPP4C-214ENST00000627746 FBXO3Q9UK99 471 aa29.2■■■□□ 2.27
PPP4C-214ENST00000627746 ECM29Q5VYK3 1845 aa29.2■■■□□ 2.26
PPP4C-214ENST00000627746 CRKP46108 304 aa29.2■■■□□ 2.26
PPP4C-214ENST00000627746 DZIP1LQ8IYY4 767 aaKnown RBP29.19■■■□□ 2.26
PPP4C-214ENST00000627746 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.19■■■□□ 2.26
PPP4C-214ENST00000627746 ZNF70Q9UC06 446 aaPredicted RBP29.19■■■□□ 2.26
PPP4C-214ENST00000627746 GNAI2P04899 355 aa29.18■■■□□ 2.26
PPP4C-214ENST00000627746 TBC1D22AQ8WUA7 517 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms