RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 HAND2P61296 217 aa9.78□□□□□ -0.84
SND1-IT1-201ENST00000623342 CAMK4Q16566 473 aa9.78□□□□□ -0.84
SND1-IT1-201ENST00000623342 ZNF34Q8IZ26 560 aa9.78□□□□□ -0.84
SND1-IT1-201ENST00000623342 BICD2Q8TD16 824 aa9.78□□□□□ -0.84
SND1-IT1-201ENST00000623342 NCOA5Q9HCD5 579 aaKnown RBP9.78□□□□□ -0.84
SND1-IT1-201ENST00000623342 ADD2P35612 726 aa9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 ATL3Q6DD88 541 aa9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 AK7Q96M32 723 aa9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 CLSTN2Q9H4D0 955 aa9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 UBN2Q6ZU65 1347 aa9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 AKAP11Q9UKA4 1901 aa9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 ZNF213O14771 459 aa9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 PRC1O43663 620 aa9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 ADD1P35611 737 aaKnown RBP9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 TYRO3Q06418 890 aa9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 RBM43Q6ZSC3 357 aaKnown RBP9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 MB21D2Q8IYB1 491 aaPredicted RBP9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 NCOA7Q8NI08 942 aa9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 CDCA7Q9BWT1 371 aaPredicted RBP9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 AHDC1Q5TGY3 1603 aaPredicted RBP9.77□□□□□ -0.85
SND1-IT1-201ENST00000623342 DOT1LQ8TEK3 1739 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 ATRNO75882 1429 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 NR1I2O75469 434 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 UQCRFS1P1P0C7P4 283 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 ARID4AP29374 1257 aaPredicted RBP9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 FOSBP53539 338 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 SLC9C2Q5TAH2 1124 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 RALYLQ86SE5 291 aaKnown RBP9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 FAM200AQ8TCP9 573 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 ZNF396Q96N95 335 aaPredicted RBP9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 RCOR1Q9UKL0 485 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 MRVI1Q9Y6F6 885 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 MROH5Q6ZUA9 1318 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 WDR19Q8NEZ3 1342 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 CARMIL3Q8ND23 1372 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 PHLPP1O60346 1717 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 MYH15Q9Y2K3 1946 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 LRP5O75197 1615 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 DHX16O60231 1041 aaKnown RBP9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 EIF5P55010 431 aaKnown RBP9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 UBE3CQ15386 1083 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 PUM3Q15397 648 aaKnown RBP9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 CCDC102BQ68D86 513 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 CKAP2LQ8IYA6 745 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 LPIN2Q92539 896 aa9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 PIH1D3Q9NQM4 214 aaKnown RBP9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 GPHNQ9NQX3 736 aaPredicted RBP9.76□□□□□ -0.85
SND1-IT1-201ENST00000623342 FDPSP14324 419 aaKnown RBP9.75□□□□□ -0.85
SND1-IT1-201ENST00000623342 PHKA1P46020 1223 aa9.75□□□□□ -0.85
SND1-IT1-201ENST00000623342 SRCAPQ6ZRS2 3230 aa9.75□□□□□ -0.85
SND1-IT1-201ENST00000623342 KLF18A0A0U1RQI7 1052 aa9.75□□□□□ -0.85
SND1-IT1-201ENST00000623342 IDH1O75874 414 aaKnown RBP9.75□□□□□ -0.85
SND1-IT1-201ENST00000623342 TPM2P07951 284 aa9.75□□□□□ -0.85
SND1-IT1-201ENST00000623342 FGFR2P21802 821 aa9.75□□□□□ -0.85
SND1-IT1-201ENST00000623342 ANTXR2P58335 489 aa9.75□□□□□ -0.85
SND1-IT1-201ENST00000623342 PLCB2Q00722 1185 aa9.75□□□□□ -0.85
SND1-IT1-201ENST00000623342 CEBPZQ03701 1054 aaKnown RBP9.75□□□□□ -0.85
SND1-IT1-201ENST00000623342 KIAA2012Q0VF49 1180 aa9.75□□□□□ -0.85
SND1-IT1-201ENST00000623342 INTS5Q6P9B9 1019 aaKnown RBP9.75□□□□□ -0.85
SND1-IT1-201ENST00000623342 CCDC87Q9NVE4 849 aa9.75□□□□□ -0.85
SND1-IT1-201ENST00000623342 DDX60Q8IY21 1712 aaKnown RBP9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 SLIT2O94813 1529 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 GOLGA8BA8MQT2 603 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 PDE6AP16499 860 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 TERF1P54274 439 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 TRDNQ13061 729 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 DDB1Q16531 1140 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 SUSD4Q5VX71 490 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 SASS6Q6UVJ0 657 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 USP28Q96RU2 1077 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 HPS5Q9UPZ3 1129 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 THRAP3Q9Y2W1 955 aaKnown RBP9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 ZNF532Q9HCE3 1301 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 ARAP2Q8WZ64 1704 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 AP5Z1O43299 807 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 PPFIA3O75145 1194 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 SLC5A1P13866 664 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 ATP6V1AP38606 617 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 GUCY1B3Q02153 619 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 ANO6Q4KMQ2 910 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 UTP14AQ9BVJ6 771 aaKnown RBP9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 SPATA31A1Q5TZJ5 1347 aa9.74□□□□□ -0.85
SND1-IT1-201ENST00000623342 A0A0G2JS52 829 aa9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 TCRBV5S4A2TA0A5A2 114 aa9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 APPP05067 770 aa9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 CRKLP46109 303 aaKnown RBP9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 PARP10Q53GL7 1025 aa9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 ILDR1Q86SU0 546 aaPredicted RBP9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 CCAR1Q8IX12 1150 aaKnown RBP9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 HELBQ8NG08 1087 aaPredicted RBP9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 ACSBG1Q96GR2 724 aa9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 MPHOSPH8Q99549 860 aa9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 FTOQ9C0B1 505 aaKnown RBP eCLIP9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 NBPF3Q9H094 633 aa9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 WWC3Q9ULE0 1092 aa9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 CPLX1O14810 134 aa9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 CTAGE5O15320 804 aa9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 TPM3P06753 285 aa9.73□□□□□ -0.85
SND1-IT1-201ENST00000623342 PTF1AQ7RTS3 328 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms