RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 AK2P54819 239 aa25.62■■□□□ 1.69
SPAST-204ENST00000621856 CAMKK2Q96RR4 588 aa25.62■■□□□ 1.69
SPAST-204ENST00000621856 ANKIB1Q9P2G1 1089 aa25.62■■□□□ 1.69
SPAST-204ENST00000621856 NRXN2Q9P2S2 1712 aa25.61■■□□□ 1.69
SPAST-204ENST00000621856 GPAA1O43292 621 aa25.61■■□□□ 1.69
SPAST-204ENST00000621856 NFKBIBQ15653 356 aa25.61■■□□□ 1.69
SPAST-204ENST00000621856 BLOC1S2Q6QNY1 142 aa25.61■■□□□ 1.69
SPAST-204ENST00000621856 PARP3Q9Y6F1 533 aa25.61■■□□□ 1.69
SPAST-204ENST00000621856 TAF6LQ9Y6J9 622 aa25.61■■□□□ 1.69
SPAST-204ENST00000621856 MYH13Q9UKX3 1938 aa25.6■■□□□ 1.69
SPAST-204ENST00000621856 CYP21A2P08686 494 aa25.6■■□□□ 1.69
SPAST-204ENST00000621856 KLRK1P26718 216 aa25.6■■□□□ 1.69
SPAST-204ENST00000621856 FBXO33Q7Z6M2 555 aa25.6■■□□□ 1.69
SPAST-204ENST00000621856 MAGEB6Q8N7X4 407 aa25.6■■□□□ 1.69
SPAST-204ENST00000621856 STK32BQ9NY57 414 aa25.6■■□□□ 1.69
SPAST-204ENST00000621856 DENND2AQ9ULE3 1009 aa25.6■■□□□ 1.69
SPAST-204ENST00000621856 ANKRD31Q8N7Z5 1873 aa25.6■■□□□ 1.69
SPAST-204ENST00000621856 MMP10P09238 476 aa25.6■■□□□ 1.69
SPAST-204ENST00000621856 SF3B2Q13435 895 aaKnown RBP25.6■■□□□ 1.69
SPAST-204ENST00000621856 LRP2BPQ9P2M1 347 aa25.6■■□□□ 1.69
SPAST-204ENST00000621856 XDHP47989 1333 aa25.59■■□□□ 1.69
SPAST-204ENST00000621856 TCRBV5S4A2TA0A5A2 114 aa25.59■■□□□ 1.69
SPAST-204ENST00000621856 FRAT2O75474 233 aaPredicted RBP25.59■■□□□ 1.69
SPAST-204ENST00000621856 HIBADHP31937 336 aaKnown RBP25.59■■□□□ 1.69
SPAST-204ENST00000621856 MSL1Q68DK7 614 aa25.59■■□□□ 1.69
SPAST-204ENST00000621856 ANO8Q9HCE9 1232 aaPredicted RBP25.59■■□□□ 1.69
SPAST-204ENST00000621856 LEMD3Q9Y2U8 911 aa25.59■■□□□ 1.69
SPAST-204ENST00000621856 SEMA3EO15041 775 aa25.58■■□□□ 1.69
SPAST-204ENST00000621856 HOXA10P31260 410 aaPredicted RBP25.58■■□□□ 1.69
SPAST-204ENST00000621856 SLC15A2Q16348 729 aa25.58■■□□□ 1.69
SPAST-204ENST00000621856 BRIP1Q9BX63 1249 aa25.58■■□□□ 1.69
SPAST-204ENST00000621856 CWC22Q9HCG8 908 aaKnown RBP25.58■■□□□ 1.69
SPAST-204ENST00000621856 CTNNA3Q9UI47 895 aa25.58■■□□□ 1.69
SPAST-204ENST00000621856 COL1A1P02452 1464 aaPredicted RBP25.58■■□□□ 1.68
SPAST-204ENST00000621856 KLRG2A4D1S0 409 aaPredicted RBP25.57■■□□□ 1.68
SPAST-204ENST00000621856 CUL4AQ13619 759 aa25.57■■□□□ 1.68
SPAST-204ENST00000621856 CRAMP1Q96RY5 1269 aa25.57■■□□□ 1.68
SPAST-204ENST00000621856 LIMCH1Q9UPQ0 1083 aa25.57■■□□□ 1.68
SPAST-204ENST00000621856 BBOX1O75936 387 aa25.57■■□□□ 1.68
SPAST-204ENST00000621856 RPS6KB1P23443 525 aa25.57■■□□□ 1.68
SPAST-204ENST00000621856 NEK1Q96PY6 1258 aa25.57■■□□□ 1.68
SPAST-204ENST00000621856 ABCF2Q9UG63 623 aa25.57■■□□□ 1.68
SPAST-204ENST00000621856 SLC51AQ86UW1 340 aa25.56■■□□□ 1.68
SPAST-204ENST00000621856 ZGPATQ8N5A5 531 aaKnown RBP25.56■■□□□ 1.68
SPAST-204ENST00000621856 AIDAQ96BJ3 306 aa25.56■■□□□ 1.68
SPAST-204ENST00000621856 BAG6P46379 1132 aa25.55■■□□□ 1.68
SPAST-204ENST00000621856 GPSM2P81274 684 aa25.54■■□□□ 1.68
SPAST-204ENST00000621856 LARP6Q9BRS8 491 aaKnown RBP25.54■■□□□ 1.68
SPAST-204ENST00000621856 RAI14Q9P0K7 980 aa25.54■■□□□ 1.68
SPAST-204ENST00000621856 FOXP2O15409 715 aa25.54■■□□□ 1.68
SPAST-204ENST00000621856 TTLL5Q6EMB2 1281 aa25.54■■□□□ 1.68
SPAST-204ENST00000621856 QSER1Q2KHR3 1735 aa25.53■■□□□ 1.68
SPAST-204ENST00000621856 LAMA4Q16363 1823 aa25.53■■□□□ 1.68
SPAST-204ENST00000621856 IMMTQ16891 758 aaKnown RBP25.53■■□□□ 1.68
SPAST-204ENST00000621856 TXNRD3Q86VQ6 643 aa25.53■■□□□ 1.68
SPAST-204ENST00000621856 INTS4Q96HW7 963 aaKnown RBP25.53■■□□□ 1.68
SPAST-204ENST00000621856 NSFL1CQ9UNZ2 370 aaKnown RBP25.53■■□□□ 1.68
SPAST-204ENST00000621856 IRS2Q9Y4H2 1338 aa25.53■■□□□ 1.68
SPAST-204ENST00000621856 MBD4O95243 580 aa25.52■■□□□ 1.68
SPAST-204ENST00000621856 FGAP02671 866 aa25.52■■□□□ 1.68
SPAST-204ENST00000621856 ATP2B4P23634 1241 aa25.52■■□□□ 1.68
SPAST-204ENST00000621856 PDE6BP35913 854 aa25.52■■□□□ 1.68
SPAST-204ENST00000621856 ANKRD1Q15327 319 aa25.52■■□□□ 1.68
SPAST-204ENST00000621856 ZSCAN31Q96LW9 406 aaPredicted RBP25.52■■□□□ 1.68
SPAST-204ENST00000621856 PDS5AQ29RF7 1337 aaKnown RBP25.52■■□□□ 1.68
SPAST-204ENST00000621856 A0A0G2JLW4 131 aa25.51■■□□□ 1.68
SPAST-204ENST00000621856 PPEF1O14829 653 aaPredicted RBP25.51■■□□□ 1.68
SPAST-204ENST00000621856 UFL1O94874 794 aa25.51■■□□□ 1.68
SPAST-204ENST00000621856 APPP05067 770 aa25.51■■□□□ 1.68
SPAST-204ENST00000621856 CHAF1AQ13111 956 aaPredicted RBP25.51■■□□□ 1.68
SPAST-204ENST00000621856 STOX1Q6ZVD7 989 aa25.51■■□□□ 1.68
SPAST-204ENST00000621856 TMC4Q7Z404 712 aa25.51■■□□□ 1.68
SPAST-204ENST00000621856 TCEANC2Q96MN5 208 aa25.51■■□□□ 1.68
SPAST-204ENST00000621856 STRBPQ96SI9 672 aaKnown RBP25.51■■□□□ 1.68
SPAST-204ENST00000621856 GGA1Q9UJY5 639 aa25.51■■□□□ 1.68
SPAST-204ENST00000621856 HMGB1P09429 215 aaKnown RBP25.51■■□□□ 1.67
SPAST-204ENST00000621856 NPR1P16066 1061 aa25.51■■□□□ 1.67
SPAST-204ENST00000621856 CYP7A1P22680 504 aa25.51■■□□□ 1.67
SPAST-204ENST00000621856 COL9A3Q14050 684 aaPredicted RBP25.51■■□□□ 1.67
SPAST-204ENST00000621856 RAB3GAP1Q15042 981 aa25.51■■□□□ 1.67
SPAST-204ENST00000621856 ALDH8A1Q9H2A2 487 aaPredicted RBP25.51■■□□□ 1.67
SPAST-204ENST00000621856 E7EWF7 191 aa25.5■■□□□ 1.67
SPAST-204ENST00000621856 ZNF804AQ7Z570 1209 aa25.5■■□□□ 1.67
SPAST-204ENST00000621856 LRRC37AA6NMS7 1700 aa25.5■■□□□ 1.67
SPAST-204ENST00000621856 SRGNP10124 158 aa25.49■■□□□ 1.67
SPAST-204ENST00000621856 HAND2P61296 217 aa25.49■■□□□ 1.67
SPAST-204ENST00000621856 NUCB2P80303 420 aa25.49■■□□□ 1.67
SPAST-204ENST00000621856 ARMT1Q9H993 441 aa25.49■■□□□ 1.67
SPAST-204ENST00000621856 SH2B1Q9NRF2 756 aaPredicted RBP25.49■■□□□ 1.67
SPAST-204ENST00000621856 C15orf52Q6ZUT6 534 aaKnown RBP25.49■■□□□ 1.67
SPAST-204ENST00000621856 DEFB132Q7Z7B7 95 aa25.49■■□□□ 1.67
SPAST-204ENST00000621856 GPR101Q96P66 508 aaPredicted RBP25.49■■□□□ 1.67
SPAST-204ENST00000621856 COL11A2P13942 1736 aaPredicted RBP25.48■■□□□ 1.67
SPAST-204ENST00000621856 ZNF213O14771 459 aa25.48■■□□□ 1.67
SPAST-204ENST00000621856 LARGE1O95461 756 aa25.48■■□□□ 1.67
SPAST-204ENST00000621856 SP8Q8IXZ3 490 aa25.47■■□□□ 1.67
SPAST-204ENST00000621856 MIGA1Q8NAN2 632 aa25.47■■□□□ 1.67
SPAST-204ENST00000621856 PODXL2Q9NZ53 605 aa25.47■■□□□ 1.67
SPAST-204ENST00000621856 CACNA1SQ13698 1873 aa25.47■■□□□ 1.67
SPAST-204ENST00000621856 PATL2C9JE40 543 aaKnown RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms