RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 PTPN12Q05209 780 aaKnown RBP22.48■■□□□ 1.19
SCAMP4-213ENST00000621748 INTS3Q68E01 1043 aaKnown RBP22.48■■□□□ 1.19
SCAMP4-213ENST00000621748 MEIS3Q99687 375 aa22.48■■□□□ 1.19
SCAMP4-213ENST00000621748 TNNQ9UQP3 1299 aa22.48■■□□□ 1.19
SCAMP4-213ENST00000621748 FKBP1AP62942 108 aaKnown RBP22.47■■□□□ 1.19
SCAMP4-213ENST00000621748 C2orf69Q8N8R5 385 aa22.47■■□□□ 1.19
SCAMP4-213ENST00000621748 ZBED3Q96IU2 234 aaPredicted RBP22.47■■□□□ 1.19
SCAMP4-213ENST00000621748 LRRFIP2Q9Y608 721 aaKnown RBP22.47■■□□□ 1.19
SCAMP4-213ENST00000621748 FAM205AQ6ZU69 1335 aa22.47■■□□□ 1.19
SCAMP4-213ENST00000621748 THSD7BQ9C0I4 1608 aa22.46■■□□□ 1.19
SCAMP4-213ENST00000621748 F8W031 263 aaPredicted RBP22.46■■□□□ 1.19
SCAMP4-213ENST00000621748 EYA2O00167 538 aa22.46■■□□□ 1.19
SCAMP4-213ENST00000621748 TRIM27P14373 513 aa22.46■■□□□ 1.19
SCAMP4-213ENST00000621748 MAP2K1Q02750 393 aaPredicted RBP22.46■■□□□ 1.19
SCAMP4-213ENST00000621748 IFFO2Q5TF58 517 aa22.46■■□□□ 1.19
SCAMP4-213ENST00000621748 FBXO33Q7Z6M2 555 aa22.46■■□□□ 1.19
SCAMP4-213ENST00000621748 FRAT1Q92837 279 aaPredicted RBP22.46■■□□□ 1.19
SCAMP4-213ENST00000621748 IPO8O15397 1037 aaKnown RBP22.45■■□□□ 1.18
SCAMP4-213ENST00000621748 MAP2K2P36507 400 aa22.45■■□□□ 1.18
SCAMP4-213ENST00000621748 PRAMEF18Q5VWM3 479 aa22.45■■□□□ 1.18
SCAMP4-213ENST00000621748 AIDAQ96BJ3 306 aa22.45■■□□□ 1.18
SCAMP4-213ENST00000621748 PCDHAC2Q9Y5I4 1007 aa22.45■■□□□ 1.18
SCAMP4-213ENST00000621748 ATF7IPQ6VMQ6 1270 aa22.44■■□□□ 1.18
SCAMP4-213ENST00000621748 ATG9AQ7Z3C6 839 aa22.44■■□□□ 1.18
SCAMP4-213ENST00000621748 YTHDC1Q96MU7 727 aaKnown RBP22.44■■□□□ 1.18
SCAMP4-213ENST00000621748 FGFR2P21802 821 aa22.43■■□□□ 1.18
SCAMP4-213ENST00000621748 DLGAP5Q15398 846 aa22.43■■□□□ 1.18
SCAMP4-213ENST00000621748 MTMR14Q8NCE2 650 aa22.43■■□□□ 1.18
SCAMP4-213ENST00000621748 IQSEC3Q9UPP2 1182 aaPredicted RBP22.43■■□□□ 1.18
SCAMP4-213ENST00000621748 HDAC5Q9UQL6 1122 aa22.43■■□□□ 1.18
SCAMP4-213ENST00000621748 CTCFP49711 727 aaPredicted RBP22.42■■□□□ 1.18
SCAMP4-213ENST00000621748 BCAMP50895 628 aa22.42■■□□□ 1.18
SCAMP4-213ENST00000621748 MFSD14BQ5SR56 506 aa22.42■■□□□ 1.18
SCAMP4-213ENST00000621748 RGMBQ6NW40 437 aa22.42■■□□□ 1.18
SCAMP4-213ENST00000621748 VPS37DQ86XT2 251 aa22.42■■□□□ 1.18
SCAMP4-213ENST00000621748 CLUAP1Q96AJ1 413 aa22.42■■□□□ 1.18
SCAMP4-213ENST00000621748 ZIC5Q96T25 663 aa22.42■■□□□ 1.18
SCAMP4-213ENST00000621748 SIL1Q9H173 461 aa22.42■■□□□ 1.18
SCAMP4-213ENST00000621748 ZBED9Q6R2W3 1325 aa22.41■■□□□ 1.18
SCAMP4-213ENST00000621748 PUM3Q15397 648 aaKnown RBP22.41■■□□□ 1.18
SCAMP4-213ENST00000621748 CFAP100Q494V2 611 aa22.41■■□□□ 1.18
SCAMP4-213ENST00000621748 CAVIN4Q5BKX8 364 aa22.41■■□□□ 1.18
SCAMP4-213ENST00000621748 PA2G4Q9UQ80 394 aaKnown RBP22.41■■□□□ 1.18
SCAMP4-213ENST00000621748 FAM155AB1AL88 458 aaPredicted RBP22.4■■□□□ 1.18
SCAMP4-213ENST00000621748 GNAI3P08754 354 aa22.4■■□□□ 1.18
SCAMP4-213ENST00000621748 PRMT6Q96LA8 375 aaPredicted RBP22.4■■□□□ 1.18
SCAMP4-213ENST00000621748 FBXO3Q9UK99 471 aa22.4■■□□□ 1.18
SCAMP4-213ENST00000621748 AOX1Q06278 1338 aa22.39■■□□□ 1.18
SCAMP4-213ENST00000621748 ECM29Q5VYK3 1845 aa22.39■■□□□ 1.17
SCAMP4-213ENST00000621748 SPDYE2BA6NHP3 402 aa22.39■■□□□ 1.17
SCAMP4-213ENST00000621748 CIAO1O76071 339 aa22.39■■□□□ 1.17
SCAMP4-213ENST00000621748 IFIT1P09914 478 aaKnown RBP22.39■■□□□ 1.17
SCAMP4-213ENST00000621748 SPDYE6P0CI01 402 aa22.39■■□□□ 1.17
SCAMP4-213ENST00000621748 ZNF157P51786 506 aaPredicted RBP22.39■■□□□ 1.17
SCAMP4-213ENST00000621748 LBX1P52954 281 aa22.39■■□□□ 1.17
SCAMP4-213ENST00000621748 GRIK5Q16478 980 aa22.39■■□□□ 1.17
SCAMP4-213ENST00000621748 MOB2Q70IA6 237 aa22.39■■□□□ 1.17
SCAMP4-213ENST00000621748 APOBEC3FQ8IUX4 373 aaKnown RBP22.39■■□□□ 1.17
SCAMP4-213ENST00000621748 HSPA8P11142 646 aaKnown RBP22.38■■□□□ 1.17
SCAMP4-213ENST00000621748 FKBP1BP68106 108 aa22.38■■□□□ 1.17
SCAMP4-213ENST00000621748 CHAF1AQ13111 956 aaPredicted RBP22.38■■□□□ 1.17
SCAMP4-213ENST00000621748 NOGQ13253 232 aa22.38■■□□□ 1.17
SCAMP4-213ENST00000621748 ZKSCAN2Q63HK3 967 aa22.38■■□□□ 1.17
SCAMP4-213ENST00000621748 COPRSQ9NQ92 184 aa22.38■■□□□ 1.17
SCAMP4-213ENST00000621748 PRDM10Q9NQV6 1147 aa22.38■■□□□ 1.17
SCAMP4-213ENST00000621748 TTF2Q9UNY4 1162 aaKnown RBP22.38■■□□□ 1.17
SCAMP4-213ENST00000621748 PAPPA2Q9BXP8 1791 aa22.38■■□□□ 1.17
SCAMP4-213ENST00000621748 FRAT2O75474 233 aaPredicted RBP22.37■■□□□ 1.17
SCAMP4-213ENST00000621748 RBM5P52756 815 aaKnown RBP eCLIP22.37■■□□□ 1.17
SCAMP4-213ENST00000621748 TNS4Q8IZW8 715 aa22.37■■□□□ 1.17
SCAMP4-213ENST00000621748 TMEM57Q8N5G2 664 aa22.37■■□□□ 1.17
SCAMP4-213ENST00000621748 LPIN2Q92539 896 aa22.37■■□□□ 1.17
SCAMP4-213ENST00000621748 CCDC102AQ96A19 550 aa22.37■■□□□ 1.17
SCAMP4-213ENST00000621748 BEGAINQ9BUH8 593 aa22.37■■□□□ 1.17
SCAMP4-213ENST00000621748 CEP126Q9P2H0 1117 aa22.37■■□□□ 1.17
SCAMP4-213ENST00000621748 ARAP2Q8WZ64 1704 aa22.37■■□□□ 1.17
SCAMP4-213ENST00000621748 CLRN2A0PK11 232 aa22.36■■□□□ 1.17
SCAMP4-213ENST00000621748 UBE2Q2LH0YL09 131 aa22.36■■□□□ 1.17
SCAMP4-213ENST00000621748 SLC5A1P13866 664 aa22.36■■□□□ 1.17
SCAMP4-213ENST00000621748 IL15P40933 162 aaPredicted RBP22.36■■□□□ 1.17
SCAMP4-213ENST00000621748 DEFB129Q9H1M3 183 aa22.36■■□□□ 1.17
SCAMP4-213ENST00000621748 SRGAP3O43295 1099 aa22.35■■□□□ 1.17
SCAMP4-213ENST00000621748 MTX1Q13505 466 aa22.35■■□□□ 1.17
SCAMP4-213ENST00000621748 ATP2B3Q16720 1220 aa22.35■■□□□ 1.17
SCAMP4-213ENST00000621748 SERPINA10Q9UK55 444 aa22.35■■□□□ 1.17
SCAMP4-213ENST00000621748 MYO1BO43795 1136 aa22.34■■□□□ 1.17
SCAMP4-213ENST00000621748 GNAI2P04899 355 aa22.34■■□□□ 1.17
SCAMP4-213ENST00000621748 SLC10A3P09131 477 aa22.34■■□□□ 1.17
SCAMP4-213ENST00000621748 TBC1D22AQ8WUA7 517 aa22.34■■□□□ 1.17
SCAMP4-213ENST00000621748 TSKSQ9UJT2 592 aa22.34■■□□□ 1.17
SCAMP4-213ENST00000621748 NF2P35240 595 aa22.33■■□□□ 1.17
SCAMP4-213ENST00000621748 KIF23Q02241 960 aaPredicted RBP22.33■■□□□ 1.17
SCAMP4-213ENST00000621748 TTLL12Q14166 644 aaPredicted RBP22.33■■□□□ 1.17
SCAMP4-213ENST00000621748 VEZTQ9HBM0 779 aa22.33■■□□□ 1.17
SCAMP4-213ENST00000621748 MYH13Q9UKX3 1938 aa22.33■■□□□ 1.16
SCAMP4-213ENST00000621748 CRKP46108 304 aa22.32■■□□□ 1.16
SCAMP4-213ENST00000621748 PRKG1Q13976 671 aa22.32■■□□□ 1.16
SCAMP4-213ENST00000621748 RASAL3Q86YV0 1011 aa22.32■■□□□ 1.16
SCAMP4-213ENST00000621748 DZIP1LQ8IYY4 767 aaKnown RBP22.32■■□□□ 1.16
SCAMP4-213ENST00000621748 TDRD3Q9H7E2 651 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms