RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 CLASRPQ8N2M8 674 aaKnown RBP22.84■■□□□ 1.25
CIRBP-245ENST00000621399 LRRCC1Q9C099 1032 aa22.84■■□□□ 1.25
CIRBP-245ENST00000621399 CCDC8Q9H0W5 538 aaPredicted RBP22.84■■□□□ 1.25
CIRBP-245ENST00000621399 CNOT7Q9UIV1 285 aaKnown RBP22.84■■□□□ 1.25
CIRBP-245ENST00000621399 MYO3BQ8WXR4 1341 aa22.83■■□□□ 1.25
CIRBP-245ENST00000621399 SCN9AQ15858 1988 aa22.83■■□□□ 1.25
CIRBP-245ENST00000621399 WDR90Q96KV7 1748 aa22.83■■□□□ 1.25
CIRBP-245ENST00000621399 EPHX2P34913 555 aa22.83■■□□□ 1.25
CIRBP-245ENST00000621399 C16orf71Q8IYS4 520 aaPredicted RBP22.83■■□□□ 1.25
CIRBP-245ENST00000621399 DBNDD2Q9BQY9 259 aa22.83■■□□□ 1.25
CIRBP-245ENST00000621399 RWDD1Q9H446 243 aaPredicted RBP22.83■■□□□ 1.25
CIRBP-245ENST00000621399 TAF1DQ9H5J8 278 aaPredicted RBP22.83■■□□□ 1.25
CIRBP-245ENST00000621399 H7C1D1 291 aa22.82■■□□□ 1.24
CIRBP-245ENST00000621399 KIF3CO14782 793 aa22.82■■□□□ 1.24
CIRBP-245ENST00000621399 MICALL2Q8IY33 904 aa22.82■■□□□ 1.24
CIRBP-245ENST00000621399 GMLQ99445 158 aa22.82■■□□□ 1.24
CIRBP-245ENST00000621399 SEMA3EO15041 775 aa22.81■■□□□ 1.24
CIRBP-245ENST00000621399 USP17L8P0C7I0 530 aa22.81■■□□□ 1.24
CIRBP-245ENST00000621399 CCDC158Q5M9N0 1113 aa22.81■■□□□ 1.24
CIRBP-245ENST00000621399 TLR7Q9NYK1 1049 aaKnown RBP22.81■■□□□ 1.24
CIRBP-245ENST00000621399 DBNLQ9UJU6 430 aaKnown RBP22.81■■□□□ 1.24
CIRBP-245ENST00000621399 SHTN1A0MZ66 631 aa22.8■■□□□ 1.24
CIRBP-245ENST00000621399 SMARCA5O60264 1052 aaPredicted RBP22.8■■□□□ 1.24
CIRBP-245ENST00000621399 IFIT2P09913 472 aaKnown RBP22.8■■□□□ 1.24
CIRBP-245ENST00000621399 FKBP1AP62942 108 aaKnown RBP22.8■■□□□ 1.24
CIRBP-245ENST00000621399 MFSD14BQ5SR56 506 aa22.8■■□□□ 1.24
CIRBP-245ENST00000621399 TTC39AQ5SRH9 613 aa22.8■■□□□ 1.24
CIRBP-245ENST00000621399 CERS5Q8N5B7 392 aa22.8■■□□□ 1.24
CIRBP-245ENST00000621399 ADARB2Q9NS39 739 aaKnown RBP22.8■■□□□ 1.24
CIRBP-245ENST00000621399 DENND2AQ9ULE3 1009 aa22.8■■□□□ 1.24
CIRBP-245ENST00000621399 UQCRFS1P1P0C7P4 283 aa22.79■■□□□ 1.24
CIRBP-245ENST00000621399 RASGRF1Q13972 1273 aa22.79■■□□□ 1.24
CIRBP-245ENST00000621399 EAPPQ56P03 285 aaPredicted RBP22.79■■□□□ 1.24
CIRBP-245ENST00000621399 PNMA8AQ86V59 439 aaPredicted RBP22.79■■□□□ 1.24
CIRBP-245ENST00000621399 KIAA0825Q8IV33 1275 aa22.79■■□□□ 1.24
CIRBP-245ENST00000621399 OGFOD1Q8N543 542 aa22.79■■□□□ 1.24
CIRBP-245ENST00000621399 TBC1D22AQ8WUA7 517 aa22.79■■□□□ 1.24
CIRBP-245ENST00000621399 GCC1Q96CN9 775 aa22.79■■□□□ 1.24
CIRBP-245ENST00000621399 IGHDP01880 384 aa22.78■■□□□ 1.24
CIRBP-245ENST00000621399 WDR66Q8TBY9 1149 aa22.78■■□□□ 1.24
CIRBP-245ENST00000621399 CEP350Q5VT06 3117 aa22.78■■□□□ 1.24
CIRBP-245ENST00000621399 ARAP2Q8WZ64 1704 aa22.77■■□□□ 1.24
CIRBP-245ENST00000621399 F8W031 263 aaPredicted RBP22.77■■□□□ 1.24
CIRBP-245ENST00000621399 ZBTB22O15209 634 aa22.77■■□□□ 1.24
CIRBP-245ENST00000621399 NEFLP07196 543 aa22.77■■□□□ 1.24
CIRBP-245ENST00000621399 ARID4AP29374 1257 aaPredicted RBP22.77■■□□□ 1.24
CIRBP-245ENST00000621399 ZNF280AP59817 542 aaPredicted RBP22.77■■□□□ 1.24
CIRBP-245ENST00000621399 RBM26Q5T8P6 1007 aaKnown RBP22.77■■□□□ 1.24
CIRBP-245ENST00000621399 USP50Q70EL3 339 aaPredicted RBP22.77■■□□□ 1.24
CIRBP-245ENST00000621399 TBC1D10BQ4KMP7 808 aaPredicted RBP22.76■■□□□ 1.23
CIRBP-245ENST00000621399 SAMD7Q7Z3H4 446 aa22.76■■□□□ 1.23
CIRBP-245ENST00000621399 ZBTB47Q9UFB7 747 aaPredicted RBP22.76■■□□□ 1.23
CIRBP-245ENST00000621399 HDAC9Q9UKV0 1011 aa22.76■■□□□ 1.23
CIRBP-245ENST00000621399 SCN4AP35499 1836 aa22.75■■□□□ 1.23
CIRBP-245ENST00000621399 COL1A1P02452 1464 aaPredicted RBP22.75■■□□□ 1.23
CIRBP-245ENST00000621399 MMP14P50281 582 aa22.75■■□□□ 1.23
CIRBP-245ENST00000621399 SPATA5Q8NB90 893 aa22.75■■□□□ 1.23
CIRBP-245ENST00000621399 ZNF512BQ96KM6 892 aaPredicted RBP22.75■■□□□ 1.23
CIRBP-245ENST00000621399 HMG20BQ9P0W2 317 aa22.75■■□□□ 1.23
CIRBP-245ENST00000621399 CLEC11AQ9Y240 323 aa22.75■■□□□ 1.23
CIRBP-245ENST00000621399 PSME4Q14997 1843 aa22.75■■□□□ 1.23
CIRBP-245ENST00000621399 TOMM70O94826 608 aa22.74■■□□□ 1.23
CIRBP-245ENST00000621399 SCARF1Q14162 830 aa22.74■■□□□ 1.23
CIRBP-245ENST00000621399 ANKRD45Q5TZF3 282 aa22.74■■□□□ 1.23
CIRBP-245ENST00000621399 TRPM4Q8TD43 1214 aa22.74■■□□□ 1.23
CIRBP-245ENST00000621399 MYOZ2Q9NPC6 264 aa22.74■■□□□ 1.23
CIRBP-245ENST00000621399 TTF2Q9UNY4 1162 aaKnown RBP22.74■■□□□ 1.23
CIRBP-245ENST00000621399 PDS5AQ29RF7 1337 aaKnown RBP22.74■■□□□ 1.23
CIRBP-245ENST00000621399 EGFRP00533 1210 aa22.73■■□□□ 1.23
CIRBP-245ENST00000621399 POTEIP0CG38 1075 aa22.73■■□□□ 1.23
CIRBP-245ENST00000621399 POTEJP0CG39 1038 aa22.73■■□□□ 1.23
CIRBP-245ENST00000621399 MCAMP43121 646 aa22.73■■□□□ 1.23
CIRBP-245ENST00000621399 GRIK5Q16478 980 aa22.73■■□□□ 1.23
CIRBP-245ENST00000621399 KIF4BQ2VIQ3 1234 aa22.73■■□□□ 1.23
CIRBP-245ENST00000621399 PI16Q6UXB8 463 aa22.73■■□□□ 1.23
CIRBP-245ENST00000621399 SNRKQ9NRH2 765 aa22.73■■□□□ 1.23
CIRBP-245ENST00000621399 HIRAP54198 1017 aaPredicted RBP22.72■■□□□ 1.23
CIRBP-245ENST00000621399 LDHDQ86WU2 507 aa22.72■■□□□ 1.23
CIRBP-245ENST00000621399 SMC5Q8IY18 1101 aa22.72■■□□□ 1.23
CIRBP-245ENST00000621399 ZGPATQ8N5A5 531 aaKnown RBP22.72■■□□□ 1.23
CIRBP-245ENST00000621399 SUGT1Q9Y2Z0 365 aa22.72■■□□□ 1.23
CIRBP-245ENST00000621399 SALL1Q9NSC2 1324 aa22.72■■□□□ 1.23
CIRBP-245ENST00000621399 RBM46Q8TBY0 533 aaKnown RBP22.71■■□□□ 1.23
CIRBP-245ENST00000621399 ABCF2Q9UG63 623 aa22.71■■□□□ 1.23
CIRBP-245ENST00000621399 ZNF646O15015 1829 aaPredicted RBP22.71■■□□□ 1.23
CIRBP-245ENST00000621399 LDHBP07195 334 aaKnown RBP22.7■■□□□ 1.22
CIRBP-245ENST00000621399 B4GALNT3Q6L9W6 998 aa22.7■■□□□ 1.22
CIRBP-245ENST00000621399 RBM5P52756 815 aaKnown RBP eCLIP22.69■■□□□ 1.222e-7■□□□□ 11
CIRBP-245ENST00000621399 DLGAP5Q15398 846 aa22.69■■□□□ 1.22
CIRBP-245ENST00000621399 SPTY2D1Q68D10 685 aaPredicted RBP22.69■■□□□ 1.22
CIRBP-245ENST00000621399 CHADLQ6NUI6 762 aa22.69■■□□□ 1.22
CIRBP-245ENST00000621399 TBC1D9Q6ZT07 1266 aa22.69■■□□□ 1.22
CIRBP-245ENST00000621399 SMC1BQ8NDV3 1235 aa22.69■■□□□ 1.22
CIRBP-245ENST00000621399 SERPINA10Q9UK55 444 aa22.69■■□□□ 1.22
CIRBP-245ENST00000621399 MAST3O60307 1309 aa22.68■■□□□ 1.22
CIRBP-245ENST00000621399 PRDX5P30044 214 aa22.68■■□□□ 1.22
CIRBP-245ENST00000621399 ZAP70P43403 619 aa22.68■■□□□ 1.22
CIRBP-245ENST00000621399 CFAP100Q494V2 611 aa22.68■■□□□ 1.22
CIRBP-245ENST00000621399 ZC3H15Q8WU90 426 aaKnown RBP22.68■■□□□ 1.22
CIRBP-245ENST00000621399 GPATCH3Q96I76 525 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms