RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 KIDINS220Q9ULH0 1771 aa15.97■□□□□ 0.15
CNOT3-210ENST00000618939 IFNKQ9P0W0 207 aa15.97■□□□□ 0.15
CNOT3-210ENST00000618939 ADGRB1O14514 1584 aa15.96■□□□□ 0.15
CNOT3-210ENST00000618939 SPDYE4A6NLX3 237 aa15.96■□□□□ 0.15
CNOT3-210ENST00000618939 LIG1P18858 919 aa15.96■□□□□ 0.15
CNOT3-210ENST00000618939 ATP6V1AP38606 617 aa15.96■□□□□ 0.15
CNOT3-210ENST00000618939 IFIT1BQ5T764 474 aaKnown RBP15.96■□□□□ 0.15
CNOT3-210ENST00000618939 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.96■□□□□ 0.15
CNOT3-210ENST00000618939 TTC6Q86TZ1 520 aa15.96■□□□□ 0.15
CNOT3-210ENST00000618939 BMP15O95972 392 aa15.96■□□□□ 0.15
CNOT3-210ENST00000618939 GNAT2P19087 354 aa15.96■□□□□ 0.15
CNOT3-210ENST00000618939 PIP4K2BP78356 416 aa15.96■□□□□ 0.15
CNOT3-210ENST00000618939 NOM1Q5C9Z4 860 aaKnown RBP15.96■□□□□ 0.15
CNOT3-210ENST00000618939 CWC15Q9P013 229 aaKnown RBP15.96■□□□□ 0.15
CNOT3-210ENST00000618939 E7EWF7 191 aa15.96■□□□□ 0.14
CNOT3-210ENST00000618939 DBNLQ9UJU6 430 aaKnown RBP15.96■□□□□ 0.14
CNOT3-210ENST00000618939 B4E1Z4 1266 aa15.95■□□□□ 0.14
CNOT3-210ENST00000618939 HSPA2P54652 639 aa15.95■□□□□ 0.14
CNOT3-210ENST00000618939 GNG11P61952 73 aa15.95■□□□□ 0.14
CNOT3-210ENST00000618939 MIGA1Q8NAN2 632 aa15.95■□□□□ 0.14
CNOT3-210ENST00000618939 HAUS7Q99871 368 aa15.95■□□□□ 0.14
CNOT3-210ENST00000618939 CRNKL1Q9BZJ0 848 aaKnown RBP15.95■□□□□ 0.14
CNOT3-210ENST00000618939 TMX1Q9H3N1 280 aa15.95■□□□□ 0.14
CNOT3-210ENST00000618939 ANGEL1Q9UNK9 670 aaKnown RBP15.95■□□□□ 0.14
CNOT3-210ENST00000618939 ZNF500O60304 480 aaPredicted RBP15.95■□□□□ 0.14
CNOT3-210ENST00000618939 TAF5LO75529 589 aa15.95■□□□□ 0.14
CNOT3-210ENST00000618939 TERF1P54274 439 aa15.95■□□□□ 0.14
CNOT3-210ENST00000618939 NUP88Q99567 741 aaPredicted RBP15.95■□□□□ 0.14
CNOT3-210ENST00000618939 MBD4O95243 580 aa15.95■□□□□ 0.14
CNOT3-210ENST00000618939 AFMP43652 599 aa15.95■□□□□ 0.14
CNOT3-210ENST00000618939 ZNF75DP51815 510 aa15.95■□□□□ 0.14
CNOT3-210ENST00000618939 ACSBG1Q96GR2 724 aa15.95■□□□□ 0.14
CNOT3-210ENST00000618939 TRIM75PA6NK02 468 aa15.95■□□□□ 0.14
CNOT3-210ENST00000618939 KAT14Q9H8E8 782 aa15.95■□□□□ 0.14
CNOT3-210ENST00000618939 UBA7P41226 1012 aa15.94■□□□□ 0.14
CNOT3-210ENST00000618939 CCDC181Q5TID7 509 aa15.94■□□□□ 0.14
CNOT3-210ENST00000618939 ANO1Q5XXA6 986 aa15.94■□□□□ 0.14
CNOT3-210ENST00000618939 TTLL7Q6ZT98 887 aa15.94■□□□□ 0.14
CNOT3-210ENST00000618939 DNAJC10Q8IXB1 793 aa15.94■□□□□ 0.14
CNOT3-210ENST00000618939 PYM1Q9BRP8 204 aaKnown RBP15.94■□□□□ 0.14
CNOT3-210ENST00000618939 DIP2CQ9Y2E4 1556 aa15.94■□□□□ 0.14
CNOT3-210ENST00000618939 DNAI1Q9UI46 699 aa15.94■□□□□ 0.14
CNOT3-210ENST00000618939 ZAP70P43403 619 aa15.94■□□□□ 0.14
CNOT3-210ENST00000618939 LEKR1Q6ZMV7 388 aa15.94■□□□□ 0.14
CNOT3-210ENST00000618939 TMEM87BQ96K49 555 aa15.94■□□□□ 0.14
CNOT3-210ENST00000618939 PRKCSHP14314 528 aaPredicted RBP15.93■□□□□ 0.14
CNOT3-210ENST00000618939 TXLNBQ8N3L3 684 aa15.93■□□□□ 0.14
CNOT3-210ENST00000618939 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.93■□□□□ 0.14
CNOT3-210ENST00000618939 ELP1O95163 1332 aa15.93■□□□□ 0.14
CNOT3-210ENST00000618939 SLC4A8Q2Y0W8 1093 aa15.93■□□□□ 0.14
CNOT3-210ENST00000618939 AXDND1Q5T1B0 1012 aaPredicted RBP15.93■□□□□ 0.14
CNOT3-210ENST00000618939 CCDC148Q8NFR7 591 aa15.93■□□□□ 0.14
CNOT3-210ENST00000618939 ZNF397Q8NF99 534 aaPredicted RBP15.93■□□□□ 0.14
CNOT3-210ENST00000618939 ERBB4Q15303 1308 aa15.92■□□□□ 0.14
CNOT3-210ENST00000618939 MAGEB6P1A0A0J9YX57 407 aa15.92■□□□□ 0.14
CNOT3-210ENST00000618939 N4BP3O15049 544 aa15.92■□□□□ 0.14
CNOT3-210ENST00000618939 YEATS4O95619 227 aa15.92■□□□□ 0.14
CNOT3-210ENST00000618939 ERVV-2B6SEH9 535 aa15.92■□□□□ 0.14
CNOT3-210ENST00000618939 LDHCP07864 332 aa15.92■□□□□ 0.14
CNOT3-210ENST00000618939 TCIRG1Q13488 830 aa15.92■□□□□ 0.14
CNOT3-210ENST00000618939 DDB1Q16531 1140 aa15.92■□□□□ 0.14
CNOT3-210ENST00000618939 KRI1Q8N9T8 703 aaKnown RBP15.92■□□□□ 0.14
CNOT3-210ENST00000618939 ANKARQ7Z5J8 1434 aa15.92■□□□□ 0.14
CNOT3-210ENST00000618939 PUM3Q15397 648 aaKnown RBP15.92■□□□□ 0.14
CNOT3-210ENST00000618939 SPTY2D1Q68D10 685 aaPredicted RBP15.92■□□□□ 0.14
CNOT3-210ENST00000618939 DHX58Q96C10 678 aa15.92■□□□□ 0.14
CNOT3-210ENST00000618939 TCP11L1Q9NUJ3 509 aa15.92■□□□□ 0.14
CNOT3-210ENST00000618939 NSFL1CQ9UNZ2 370 aaKnown RBP15.92■□□□□ 0.14
CNOT3-210ENST00000618939 BAG3O95817 575 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 FKBP15Q5T1M5 1219 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 ZNF589Q86UQ0 364 aaPredicted RBP15.91■□□□□ 0.14
CNOT3-210ENST00000618939 ZKSCAN3Q9BRR0 538 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 GBP3Q9H0R5 595 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 SH3TC1Q8TE82 1336 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 PFKFB2O60825 505 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 SASH1O94885 1247 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 SLU7O95391 586 aaKnown RBP15.91■□□□□ 0.14
CNOT3-210ENST00000618939 HSPD1P10809 573 aaKnown RBP15.91■□□□□ 0.14
CNOT3-210ENST00000618939 MYL5Q02045 173 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 ZSCAN29Q8IWY8 852 aaPredicted RBP15.91■□□□□ 0.14
CNOT3-210ENST00000618939 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.91■□□□□ 0.14
CNOT3-210ENST00000618939 STX8Q9UNK0 236 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 V9GYY5 206 aaPredicted RBP15.91■□□□□ 0.14
CNOT3-210ENST00000618939 ZC3H13Q5T200 1668 aaKnown RBP15.91■□□□□ 0.14
CNOT3-210ENST00000618939 PDE8AO60658 829 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 NR1I2O75469 434 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 IQCEQ6IPM2 695 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 NBPF5PQ86XG9 351 aaPredicted RBP15.91■□□□□ 0.14
CNOT3-210ENST00000618939 ERBB3P21860 1342 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 MYO3AQ8NEV4 1616 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 ERICH4A6NGS2 130 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 LARGE1O95461 756 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 CCDC12Q8WUD4 166 aaPredicted RBP15.91■□□□□ 0.14
CNOT3-210ENST00000618939 UBE2Q2Q8WVN8 375 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 ZNF274Q96GC6 653 aaPredicted RBP15.91■□□□□ 0.14
CNOT3-210ENST00000618939 BTG4Q9NY30 223 aa15.91■□□□□ 0.14
CNOT3-210ENST00000618939 RTL9Q8NET4 1388 aa15.9■□□□□ 0.14
CNOT3-210ENST00000618939 RBM5P52756 815 aaKnown RBP eCLIP15.9■□□□□ 0.14
CNOT3-210ENST00000618939 SPA17Q15506 151 aa15.9■□□□□ 0.14
CNOT3-210ENST00000618939 MYRIPQ8NFW9 859 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms