RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.49□□□□□ -1.37
CPNE4-214ENST00000617767 RBM27Q9P2N5 1060 aaKnown RBP6.49□□□□□ -1.37
CPNE4-214ENST00000617767 IQSEC3Q9UPP2 1182 aaPredicted RBP6.49□□□□□ -1.37
CPNE4-214ENST00000617767 RBM8AQ9Y5S9 174 aaKnown RBP6.49□□□□□ -1.37
CPNE4-214ENST00000617767 ROBO1Q9Y6N7 1651 aa6.49□□□□□ -1.37
CPNE4-214ENST00000617767 GOLGA6L22H0YM25 854 aa6.49□□□□□ -1.37
CPNE4-214ENST00000617767 CAND2O75155 1236 aa6.49□□□□□ -1.37
CPNE4-214ENST00000617767 CALRP27797 417 aaKnown RBP6.49□□□□□ -1.37
CPNE4-214ENST00000617767 RFX5P48382 616 aaPredicted RBP6.49□□□□□ -1.37
CPNE4-214ENST00000617767 AK2P54819 239 aa6.49□□□□□ -1.37
CPNE4-214ENST00000617767 RAB3GAP1Q15042 981 aa6.49□□□□□ -1.37
CPNE4-214ENST00000617767 ANKRD20A12PQ8NF67 263 aa6.49□□□□□ -1.37
CPNE4-214ENST00000617767 BAG4O95429 457 aaKnown RBP6.49□□□□□ -1.37
CPNE4-214ENST00000617767 VPS53Q5VIR6 699 aa6.49□□□□□ -1.37
CPNE4-214ENST00000617767 RAB11FIP4Q86YS3 637 aa6.49□□□□□ -1.37
CPNE4-214ENST00000617767 GREM2Q9H772 168 aa6.49□□□□□ -1.37
CPNE4-214ENST00000617767 ARFGEF2Q9Y6D5 1785 aa6.49□□□□□ -1.37
CPNE4-214ENST00000617767 TAF5LO75529 589 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 POLD1P28340 1107 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 INHBEP58166 350 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 HAND2P61296 217 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 DZIP3Q86Y13 1208 aaKnown RBP6.48□□□□□ -1.37
CPNE4-214ENST00000617767 FAM184AQ8NB25 1140 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 EVI5LQ96CN4 794 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 CNNM1Q9NRU3 951 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 IRAK4Q9NWZ3 460 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 RAD50Q92878 1312 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 HSPA4P34932 840 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 BMS1Q14692 1282 aaKnown RBP6.48□□□□□ -1.37
CPNE4-214ENST00000617767 WASHC4Q2M389 1173 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 FERMT3Q86UX7 667 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 MARCH10Q8NA82 808 aaPredicted RBP6.48□□□□□ -1.37
CPNE4-214ENST00000617767 TTC41PQ6P2S7 1318 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 NCOA3Q9Y6Q9 1424 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 SCP2P22307 547 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 CASP7P55210 303 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 TCIRG1Q13488 830 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 LDHAL6AQ6ZMR3 332 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 ATG9AQ7Z3C6 839 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 CREBRFQ8IUR6 639 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 ZDHHC9Q9Y397 364 aa6.48□□□□□ -1.37
CPNE4-214ENST00000617767 VPS37CA5D8V6 355 aaPredicted RBP6.47□□□□□ -1.37
CPNE4-214ENST00000617767 WTIPA6NIX2 430 aaPredicted RBP6.47□□□□□ -1.37
CPNE4-214ENST00000617767 H7C1W4 665 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 IFIT1P09914 478 aaKnown RBP6.47□□□□□ -1.37
CPNE4-214ENST00000617767 DDIT3P35638 169 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 IFIT5Q13325 482 aaKnown RBP6.47□□□□□ -1.37
CPNE4-214ENST00000617767 SCARF1Q14162 830 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 C11orf91Q3C1V1 193 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 MUM1L1Q5H9M0 696 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 METTL24Q5JXM2 366 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 RUFY3Q7L099 469 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 RUFY2Q8WXA3 655 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 COPRSQ9NQ92 184 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 CEP126Q9P2H0 1117 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 NSFL1CQ9UNZ2 370 aaKnown RBP6.47□□□□□ -1.37
CPNE4-214ENST00000617767 IRS4O14654 1257 aaPredicted RBP6.47□□□□□ -1.37
CPNE4-214ENST00000617767 CYP19A1P11511 503 aaPredicted RBP6.47□□□□□ -1.37
CPNE4-214ENST00000617767 ITGA6P23229 1130 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 MTA1Q13330 715 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 C1QTNF12Q5T7M4 302 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 CREB3L3Q68CJ9 461 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 NAIF1Q69YI7 327 aaPredicted RBP6.47□□□□□ -1.37
CPNE4-214ENST00000617767 FAM173BQ6P4H8 233 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 SLC24A3Q9HC58 644 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 SEC31BQ9NQW1 1179 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 PDRG1Q9NUG6 133 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 SPTLC3Q9NUV7 552 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 RRP15Q9Y3B9 282 aaKnown RBP6.47□□□□□ -1.37
CPNE4-214ENST00000617767 UTYO14607 1347 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 CCDC171Q6TFL3 1326 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 PKD1L3Q7Z443 1732 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 TOGARAM1Q9Y4F4 1720 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 PARP4Q9UKK3 1724 aaKnown RBP6.47□□□□□ -1.37
CPNE4-214ENST00000617767 TPM3P06753 285 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 NKX1-1Q15270 411 aaPredicted RBP6.47□□□□□ -1.37
CPNE4-214ENST00000617767 SWT1Q5T5J6 900 aaKnown RBP6.47□□□□□ -1.37
CPNE4-214ENST00000617767 TTLL5Q6EMB2 1281 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 GTF3C6Q969F1 213 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 ITGB4P16144 1822 aa6.47□□□□□ -1.37
CPNE4-214ENST00000617767 ABCA3Q99758 1704 aa6.46□□□□□ -1.37
CPNE4-214ENST00000617767 TUBGCP6Q96RT7 1819 aa6.46□□□□□ -1.37
CPNE4-214ENST00000617767 EYA2O00167 538 aa6.46□□□□□ -1.37
CPNE4-214ENST00000617767 ZKSCAN1P17029 563 aaPredicted RBP6.46□□□□□ -1.37
CPNE4-214ENST00000617767 TTC39AQ5SRH9 613 aa6.46□□□□□ -1.37
CPNE4-214ENST00000617767 MCTP2Q6DN12 878 aa6.46□□□□□ -1.37
CPNE4-214ENST00000617767 SRLQ86TD4 932 aa6.46□□□□□ -1.37
CPNE4-214ENST00000617767 DDX11Q96FC9 970 aa6.46□□□□□ -1.37
CPNE4-214ENST00000617767 NBPF3Q9H094 633 aa6.46□□□□□ -1.37
CPNE4-214ENST00000617767 KIF3CO14782 793 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 NPHP1O15259 732 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 IPO7O95373 1038 aaKnown RBP6.46□□□□□ -1.38
CPNE4-214ENST00000617767 LIG1P18858 919 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 CRKLP46109 303 aaKnown RBP6.46□□□□□ -1.38
CPNE4-214ENST00000617767 ITPK1Q13572 414 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 ZSCAN26Q16670 478 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 KMT5BQ4FZB7 885 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 NLRP10Q86W26 655 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 XAGE2Q96GT9 111 aa6.46□□□□□ -1.38
CPNE4-214ENST00000617767 PAIP2Q9BPZ3 127 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms