RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-223	ENST00000617585	FAM84B	Q96KN1	310 aa	Predicted RBP	28.05	■■■□□ 2.08
ARHGEF1-223	ENST00000617585	ARAP2	Q8WZ64	1704 aa		28.04	■■■□□ 2.08
ARHGEF1-223	ENST00000617585	PDE8B	O95263	885 aa		28.03	■■■□□ 2.08
ARHGEF1-223	ENST00000617585	HIBADH	P31937	336 aa	Known RBP	28.03	■■■□□ 2.08
ARHGEF1-223	ENST00000617585	PAPPA2	Q9BXP8	1791 aa		28.03	■■■□□ 2.08
ARHGEF1-223	ENST00000617585	UBTFL1	P0CB47	393 aa	Predicted RBP	28.02	■■■□□ 2.08
ARHGEF1-223	ENST00000617585	FKBP1B	P68106	108 aa		28.02	■■■□□ 2.08
ARHGEF1-223	ENST00000617585	INTS3	Q68E01	1043 aa	Known RBP	28.02	■■■□□ 2.08
ARHGEF1-223	ENST00000617585	FBXO33	Q7Z6M2	555 aa		28.02	■■■□□ 2.08
ARHGEF1-223	ENST00000617585	KLHDC4	Q8TBB5	520 aa		28.02	■■■□□ 2.08
ARHGEF1-223	ENST00000617585	HDAC5	Q9UQL6	1122 aa		28.02	■■■□□ 2.08
ARHGEF1-223	ENST00000617585	AOC2	O75106	756 aa		28.01	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	PTPN12	Q05209	780 aa	Known RBP	28.01	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	METTL24	Q5JXM2	366 aa		28.01	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	RGMB	Q6NW40	437 aa		28.01	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	FBXO3	Q9UK99	471 aa		28.01	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	GYG1	P46976	350 aa		28	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	NOG	Q13253	232 aa		28	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	FAM155A	B1AL88	458 aa	Predicted RBP	27.99	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	EYA2	O00167	538 aa		27.99	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	GRM1	Q13255	1194 aa		27.99	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	HSPA8	P11142	646 aa	Known RBP	27.98	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	FGFR2	P21802	821 aa		27.98	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	CCDC102A	Q96A19	550 aa		27.98	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	COL1A1	P02452	1464 aa	Predicted RBP	27.97	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	IPO8	O15397	1037 aa	Known RBP	27.97	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	DLGAP5	Q15398	846 aa		27.97	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	APOBEC3F	Q8IUX4	373 aa	Known RBP	27.97	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	HNRNPU	Q00839	825 aa	Known RBP eCLIP	27.96	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	ATG9A	Q7Z3C6	839 aa		27.96	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	TNS4	Q8IZW8	715 aa		27.96	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	SCAF8	Q9UPN6	1271 aa	Known RBP	27.96	■■■□□ 2.07
ARHGEF1-223	ENST00000617585	CIAO1	O76071	339 aa		27.95	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	LBX1	P52954	281 aa		27.95	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	PUM3	Q15397	648 aa	Known RBP	27.95	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	CAVIN4	Q5BKX8	364 aa		27.95	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	MEIS3	Q99687	375 aa		27.95	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	BEGAIN	Q9BUH8	593 aa		27.95	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	SPDYE2B	A6NHP3	402 aa		27.94	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	CA12	O43570	354 aa		27.94	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	BCAR3	O75815	825 aa		27.94	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	SPDYE6	P0CI01	402 aa		27.94	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	MFSD14B	Q5SR56	506 aa		27.94	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	ATF7IP	Q6VMQ6	1270 aa		27.94	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	LRRFIP2	Q9Y608	721 aa	Known RBP	27.94	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	SLC10A3	P09131	477 aa		27.93	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	TRIM27	P14373	513 aa		27.93	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	ZNF157	P51786	506 aa	Predicted RBP	27.93	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	CFAP100	Q494V2	611 aa		27.93	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	JAG2	Q9Y219	1238 aa		27.93	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	MYH13	Q9UKX3	1938 aa		27.92	■■■□□ 2.06
ARHGEF1-223	ENST00000617585		F8W031	263 aa	Predicted RBP	27.92	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	GNAI3	P08754	354 aa		27.92	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	PRMT6	Q96LA8	375 aa	Predicted RBP	27.92	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	ZIC5	Q96T25	663 aa		27.92	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	SERPINA10	Q9UK55	444 aa		27.92	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	IFIT1	P09914	478 aa	Known RBP	27.91	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	PRAMEF18	Q5VWM3	479 aa		27.91	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	VPS37D	Q86XT2	251 aa		27.91	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	LPIN2	Q92539	896 aa		27.91	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	COPRS	Q9NQ92	184 aa		27.91	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	PCDHAC2	Q9Y5I4	1007 aa		27.91	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	MTX1	Q13505	466 aa		27.9	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	TBC1D22A	Q8WUA7	517 aa		27.9	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	PPP2R3B	Q9Y5P8	575 aa		27.9	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	AKAP11	Q9UKA4	1901 aa		27.9	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	MYO1B	O43795	1136 aa		27.89	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	NF2	P35240	595 aa		27.89	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	BCAM	P50895	628 aa		27.89	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	DEFB129	Q9H1M3	183 aa		27.89	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	TTF2	Q9UNY4	1162 aa	Known RBP	27.89	■■■□□ 2.06
ARHGEF1-223	ENST00000617585	ZBED9	Q6R2W3	1325 aa		27.89	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	ZBTB22	O15209	634 aa		27.88	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	HDLBP	Q00341	1268 aa	Known RBP	27.88	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	RASAL3	Q86YV0	1011 aa		27.88	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	SLC5A1	P13866	664 aa		27.87	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	IL15	P40933	162 aa	Predicted RBP	27.87	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	MOB2	Q70IA6	237 aa		27.87	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	REM2	Q8IYK8	340 aa	Predicted RBP	27.87	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	MRI	Q9BWK5	157 aa		27.87	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	KIF23	Q02241	960 aa	Predicted RBP	27.86	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	CEP126	Q9P2H0	1117 aa		27.86	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	27.86	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	TNN	Q9UQP3	1299 aa		27.86	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	SUGT1	Q9Y2Z0	365 aa		27.86	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	AOX1	Q06278	1338 aa		27.86	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	UBE2Q2L	H0YL09	131 aa		27.85	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	ZKSCAN2	Q63HK3	967 aa		27.85	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	FRAT1	Q92837	279 aa	Predicted RBP	27.85	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	SIL1	Q9H173	461 aa		27.85	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	GRIK5	Q16478	980 aa		27.84	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	MAP3K11	Q16584	847 aa		27.84	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	SPDYE2	Q495Y8	402 aa		27.84	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	SAGE1	Q9NXZ1	904 aa		27.84	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	PA2G4	Q9UQ80	394 aa	Known RBP	27.84	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	CLRN2	A0PK11	232 aa		27.83	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	FRAT2	O75474	233 aa	Predicted RBP	27.83	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	CRK	P46108	304 aa		27.83	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	RBM5	P52756	815 aa	Known RBP eCLIP	27.83	■■■□□ 2.05
ARHGEF1-223	ENST00000617585	LDLRAD1	Q5T700	205 aa		27.83	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms