RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 RABEP2Q9H5N1 569 aa17.47■□□□□ 0.39
TNXB-209ENST00000613214 E7EVH7 732 aa17.47■□□□□ 0.39
TNXB-209ENST00000613214 CCT6BQ92526 530 aa17.47■□□□□ 0.39
TNXB-209ENST00000613214 BEGAINQ9BUH8 593 aa17.47■□□□□ 0.39
TNXB-209ENST00000613214 LRPPRCP42704 1394 aaKnown RBP17.47■□□□□ 0.39
TNXB-209ENST00000613214 ERICH3Q5RHP9 1530 aa17.47■□□□□ 0.39
TNXB-209ENST00000613214 IRS4O14654 1257 aaPredicted RBP17.47■□□□□ 0.39
TNXB-209ENST00000613214 LDHBP07195 334 aaKnown RBP17.47■□□□□ 0.39
TNXB-209ENST00000613214 DNM1Q05193 864 aaKnown RBP17.47■□□□□ 0.39
TNXB-209ENST00000613214 RHPN1Q8TCX5 695 aa17.47■□□□□ 0.39
TNXB-209ENST00000613214 NAP1L3Q99457 506 aaPredicted RBP17.47■□□□□ 0.39
TNXB-209ENST00000613214 LRRC27Q9C0I9 530 aa17.47■□□□□ 0.39
TNXB-209ENST00000613214 PAG1Q9NWQ8 432 aa17.47■□□□□ 0.39
TNXB-209ENST00000613214 SLU7O95391 586 aaKnown RBP17.47■□□□□ 0.39
TNXB-209ENST00000613214 TFCP2Q12800 502 aa17.47■□□□□ 0.39
TNXB-209ENST00000613214 ZSCAN23Q3MJ62 389 aa17.46■□□□□ 0.39
TNXB-209ENST00000613214 KANK3Q6NY19 840 aa17.46■□□□□ 0.39
TNXB-209ENST00000613214 ZGPATQ8N5A5 531 aaKnown RBP17.46■□□□□ 0.39
TNXB-209ENST00000613214 TTC12Q9H892 705 aaPredicted RBP17.46■□□□□ 0.39
TNXB-209ENST00000613214 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.39
TNXB-209ENST00000613214 USP48Q86UV5 1035 aa17.46■□□□□ 0.39
TNXB-209ENST00000613214 UBLCP1Q8WVY7 318 aaPredicted RBP17.46■□□□□ 0.39
TNXB-209ENST00000613214 EPSTI1Q96J88 318 aa17.46■□□□□ 0.39
TNXB-209ENST00000613214 USTQ9Y2C2 406 aa17.46■□□□□ 0.39
TNXB-209ENST00000613214 CTNND2Q9UQB3 1225 aa17.46■□□□□ 0.39
TNXB-209ENST00000613214 CEP83Q9Y592 693 aa17.46■□□□□ 0.39
TNXB-209ENST00000613214 KRT19P08727 400 aa17.46■□□□□ 0.38
TNXB-209ENST00000613214 SEC62Q99442 399 aaKnown RBP17.46■□□□□ 0.38
TNXB-209ENST00000613214 GRIN2BQ13224 1484 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 MCMDC2Q4G0Z9 681 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 WDR97A6NE52 1622 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 PIK3R4Q99570 1358 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 UFL1O94874 794 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 TTC22Q5TAA0 569 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 CASKIN1Q8WXD9 1431 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 MSH6P52701 1360 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 HFM1A2PYH4 1435 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 NOP56O00567 594 aaKnown RBP17.45■□□□□ 0.38
TNXB-209ENST00000613214 CYLC1P35663 651 aaPredicted RBP17.45■□□□□ 0.38
TNXB-209ENST00000613214 USP37Q86T82 979 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 TMOD4Q9NZQ9 345 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 VWA3AA6NCI4 1184 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 KIF2AO00139 706 aaPredicted RBP17.45■□□□□ 0.38
TNXB-209ENST00000613214 CCNT1O60563 726 aaKnown RBP17.45■□□□□ 0.38
TNXB-209ENST00000613214 KRT79Q5XKE5 535 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 CCDC129Q6ZRS4 1044 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 NEK11Q8NG66 645 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 PTPRCP08575 1304 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 TOM1O60784 492 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 SDSP20132 328 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 ANAPC4Q9UJX5 808 aa17.45■□□□□ 0.38
TNXB-209ENST00000613214 CNGA1P29973 690 aa17.44■□□□□ 0.38
TNXB-209ENST00000613214 GSDMDP57764 484 aa17.44■□□□□ 0.38
TNXB-209ENST00000613214 TMX3Q96JJ7 454 aa17.44■□□□□ 0.38
TNXB-209ENST00000613214 FNBP1Q96RU3 617 aa17.44■□□□□ 0.38
TNXB-209ENST00000613214 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.44■□□□□ 0.38
TNXB-209ENST00000613214 SATB1Q01826 763 aa17.44■□□□□ 0.38
TNXB-209ENST00000613214 LONRF3Q496Y0 759 aa17.44■□□□□ 0.38
TNXB-209ENST00000613214 FAM47CQ5HY64 1035 aa17.44■□□□□ 0.38
TNXB-209ENST00000613214 SEPT14Q6ZU15 432 aa17.44■□□□□ 0.38
TNXB-209ENST00000613214 NKTRP30414 1462 aaKnown RBP17.44■□□□□ 0.38
TNXB-209ENST00000613214 IDI1Q13907 227 aa17.44■□□□□ 0.38
TNXB-209ENST00000613214 LEO1Q8WVC0 666 aaPredicted RBP17.44■□□□□ 0.38
TNXB-209ENST00000613214 PPP1R12AO14974 1030 aaPredicted RBP17.44■□□□□ 0.38
TNXB-209ENST00000613214 SYT1P21579 422 aa17.44■□□□□ 0.38
TNXB-209ENST00000613214 CAMSAP2Q08AD1 1489 aa17.44■□□□□ 0.38
TNXB-209ENST00000613214 KRT24Q2M2I5 525 aa17.44■□□□□ 0.38
TNXB-209ENST00000613214 PLVAPQ9BX97 442 aa17.44■□□□□ 0.38
TNXB-209ENST00000613214 PSMA7O14818 248 aa17.43■□□□□ 0.38
TNXB-209ENST00000613214 HMGB2P26583 209 aaKnown RBP17.43■□□□□ 0.38
TNXB-209ENST00000613214 MNAT1P51948 309 aa17.43■□□□□ 0.38
TNXB-209ENST00000613214 DAAM2Q86T65 1068 aa17.43■□□□□ 0.38
TNXB-209ENST00000613214 CFAP57Q96MR6 1250 aa17.43■□□□□ 0.38
TNXB-209ENST00000613214 PLEKHH2Q8IVE3 1493 aa17.43■□□□□ 0.38
TNXB-209ENST00000613214 C4orf50Q6ZRC1 276 aa17.43■□□□□ 0.38
TNXB-209ENST00000613214 NCKAP5LQ9HCH0 1330 aa17.43■□□□□ 0.38
TNXB-209ENST00000613214 KMT5BQ4FZB7 885 aa17.43■□□□□ 0.38
TNXB-209ENST00000613214 TPTE2Q6XPS3 522 aa17.43■□□□□ 0.38
TNXB-209ENST00000613214 SMC6Q96SB8 1091 aa17.43■□□□□ 0.38
TNXB-209ENST00000613214 ZSCAN22P10073 491 aaPredicted RBP17.42■□□□□ 0.38
TNXB-209ENST00000613214 CPA1P15085 419 aa17.42■□□□□ 0.38
TNXB-209ENST00000613214 HSPA1LP34931 641 aa17.42■□□□□ 0.38
TNXB-209ENST00000613214 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.42■□□□□ 0.38
TNXB-209ENST00000613214 CD109Q6YHK3 1445 aa17.42■□□□□ 0.38
TNXB-209ENST00000613214 ZNF569Q5MCW4 686 aa17.42■□□□□ 0.38
TNXB-209ENST00000613214 RTL1A6NKG5 1358 aa17.42■□□□□ 0.38
TNXB-209ENST00000613214 FAM135AQ9P2D6 1515 aa17.42■□□□□ 0.38
TNXB-209ENST00000613214 NYXQ9GZU5 481 aa17.42■□□□□ 0.38
TNXB-209ENST00000613214 PARP1P09874 1014 aaKnown RBP17.42■□□□□ 0.38
TNXB-209ENST00000613214 NCAPH2Q6IBW4 605 aa17.42■□□□□ 0.38
TNXB-209ENST00000613214 DAPK1P53355 1430 aa17.42■□□□□ 0.38
TNXB-209ENST00000613214 GRM8O00222 908 aa17.41■□□□□ 0.38
TNXB-209ENST00000613214 UBE2HP62256 183 aa17.41■□□□□ 0.38
TNXB-209ENST00000613214 RPUSD2Q8IZ73 545 aaKnown RBP17.41■□□□□ 0.38
TNXB-209ENST00000613214 DACT1Q9NYF0 836 aa17.41■□□□□ 0.38
TNXB-209ENST00000613214 hCG_1642624A0A1W2PR95 340 aa17.41■□□□□ 0.38
TNXB-209ENST00000613214 TAF5LO75529 589 aa17.41■□□□□ 0.38
TNXB-209ENST00000613214 GAS8O95995 478 aa17.41■□□□□ 0.38
TNXB-209ENST00000613214 TRAPPC3LQ5T215 181 aa17.41■□□□□ 0.38
TNXB-209ENST00000613214 AFG3L2Q9Y4W6 797 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms