RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 ANKRD36CQ5JPF3 1778 aa20.19■□□□□ 0.82
NEK3-206ENST00000611833 FGAP02671 866 aa20.19■□□□□ 0.82
NEK3-206ENST00000611833 CTSWP56202 376 aa20.19■□□□□ 0.82
NEK3-206ENST00000611833 ATL3Q6DD88 541 aa20.19■□□□□ 0.82
NEK3-206ENST00000611833 DNAJC25Q9H1X3 360 aa20.19■□□□□ 0.82
NEK3-206ENST00000611833 GPHNQ9NQX3 736 aaPredicted RBP20.19■□□□□ 0.82
NEK3-206ENST00000611833 FAM13BQ9NYF5 915 aa20.19■□□□□ 0.82
NEK3-206ENST00000611833 DYNC1I1O14576 645 aa20.19■□□□□ 0.82
NEK3-206ENST00000611833 MCAMP43121 646 aa20.19■□□□□ 0.82
NEK3-206ENST00000611833 DRC7Q8IY82 874 aa20.19■□□□□ 0.82
NEK3-206ENST00000611833 FBXL16Q8N461 479 aa20.19■□□□□ 0.82
NEK3-206ENST00000611833 USP28Q96RU2 1077 aa20.19■□□□□ 0.82
NEK3-206ENST00000611833 SPTLC3Q9NUV7 552 aa20.19■□□□□ 0.82
NEK3-206ENST00000611833 MYH7P12883 1935 aa20.18■□□□□ 0.82
NEK3-206ENST00000611833 CCDC73Q6ZRK6 1079 aa20.18■□□□□ 0.82
NEK3-206ENST00000611833 TRIM5Q9C035 493 aa20.18■□□□□ 0.82
NEK3-206ENST00000611833 PDCL3Q9H2J4 239 aa20.18■□□□□ 0.82
NEK3-206ENST00000611833 KCNF1Q9H3M0 494 aa20.18■□□□□ 0.82
NEK3-206ENST00000611833 MYH3P11055 1940 aa20.18■□□□□ 0.82
NEK3-206ENST00000611833 AKAP11Q9UKA4 1901 aa20.18■□□□□ 0.82
NEK3-206ENST00000611833 CARMIL3Q8ND23 1372 aa20.18■□□□□ 0.82
NEK3-206ENST00000611833 IRS4O14654 1257 aaPredicted RBP20.18■□□□□ 0.82
NEK3-206ENST00000611833 EVCP57679 992 aa20.18■□□□□ 0.82
NEK3-206ENST00000611833 KAT6BQ8WYB5 2073 aa20.17■□□□□ 0.82
NEK3-206ENST00000611833 ANKRD18BA2A2Z9 1011 aa20.17■□□□□ 0.82
NEK3-206ENST00000611833 CTAGE5O15320 804 aa20.17■□□□□ 0.82
NEK3-206ENST00000611833 CAVIN2O95810 425 aa20.17■□□□□ 0.82
NEK3-206ENST00000611833 VGLL2Q8N8G2 317 aa20.17■□□□□ 0.82
NEK3-206ENST00000611833 TDRD7Q8NHU6 1098 aaKnown RBP20.17■□□□□ 0.82
NEK3-206ENST00000611833 PRC1O43663 620 aa20.16■□□□□ 0.82
NEK3-206ENST00000611833 KIAA1524Q8TCG1 905 aa20.16■□□□□ 0.82
NEK3-206ENST00000611833 DNAJC5Q9H3Z4 198 aa20.16■□□□□ 0.82
NEK3-206ENST00000611833 CNNM1Q9NRU3 951 aa20.16■□□□□ 0.82
NEK3-206ENST00000611833 TRMT112Q9UI30 125 aaKnown RBP20.16■□□□□ 0.82
NEK3-206ENST00000611833 NUP98P52948 1817 aa20.16■□□□□ 0.82
NEK3-206ENST00000611833 GPAA1O43292 621 aa20.16■□□□□ 0.82
NEK3-206ENST00000611833 ME1P48163 572 aa20.16■□□□□ 0.82
NEK3-206ENST00000611833 RALYLQ86SE5 291 aaKnown RBP20.16■□□□□ 0.82
NEK3-206ENST00000611833 SYTL4Q96C24 671 aaPredicted RBP20.16■□□□□ 0.82
NEK3-206ENST00000611833 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.16■□□□□ 0.82
NEK3-206ENST00000611833 PYCARDQ9ULZ3 195 aa20.16■□□□□ 0.82
NEK3-206ENST00000611833 ZNF213O14771 459 aa20.15■□□□□ 0.82
NEK3-206ENST00000611833 DHX16O60231 1041 aaKnown RBP20.15■□□□□ 0.82
NEK3-206ENST00000611833 FDPSP14324 419 aaKnown RBP20.15■□□□□ 0.82
NEK3-206ENST00000611833 PTGS1P23219 599 aa20.15■□□□□ 0.82
NEK3-206ENST00000611833 MB21D2Q8IYB1 491 aaPredicted RBP20.15■□□□□ 0.82
NEK3-206ENST00000611833 NCOA7Q8NI08 942 aa20.15■□□□□ 0.82
NEK3-206ENST00000611833 PRIMPOLQ96LW4 560 aa20.15■□□□□ 0.82
NEK3-206ENST00000611833 COL14A1Q05707 1796 aaKnown RBP20.15■□□□□ 0.82
NEK3-206ENST00000611833 KLF18A0A0U1RQI7 1052 aa20.15■□□□□ 0.82
NEK3-206ENST00000611833 KDM4FA0A1W2PPD8 638 aa20.15■□□□□ 0.82
NEK3-206ENST00000611833 KINO60870 393 aaKnown RBP20.15■□□□□ 0.82
NEK3-206ENST00000611833 ZNF75DP51815 510 aa20.15■□□□□ 0.82
NEK3-206ENST00000611833 GLIPR1L2Q4G1C9 344 aa20.15■□□□□ 0.82
NEK3-206ENST00000611833 GOLPH3LQ9H4A5 285 aa20.15■□□□□ 0.82
NEK3-206ENST00000611833 TBC1D2BQ9UPU7 963 aa20.15■□□□□ 0.82
NEK3-206ENST00000611833 ILDR1Q86SU0 546 aaPredicted RBP20.14■□□□□ 0.82
NEK3-206ENST00000611833 MYRIPQ8NFW9 859 aa20.14■□□□□ 0.82
NEK3-206ENST00000611833 UBN2Q6ZU65 1347 aa20.14■□□□□ 0.81
NEK3-206ENST00000611833 GOLGA8BA8MQT2 603 aa20.14■□□□□ 0.81
NEK3-206ENST00000611833 GOLGA6L19H0YKK7 550 aa20.14■□□□□ 0.81
NEK3-206ENST00000611833 ZSCAN25Q6NSZ9 544 aa20.14■□□□□ 0.81
NEK3-206ENST00000611833 ZNF512BQ96KM6 892 aaPredicted RBP20.14■□□□□ 0.81
NEK3-206ENST00000611833 DDX60Q8IY21 1712 aaKnown RBP20.13■□□□□ 0.81
NEK3-206ENST00000611833 PDE8AO60658 829 aa20.13■□□□□ 0.81
NEK3-206ENST00000611833 PDE8BO95263 885 aa20.13■□□□□ 0.81
NEK3-206ENST00000611833 ADD2P35612 726 aa20.13■□□□□ 0.81
NEK3-206ENST00000611833 ANTXR2P58335 489 aa20.13■□□□□ 0.81
NEK3-206ENST00000611833 CCDC186Q7Z3E2 898 aa20.13■□□□□ 0.81
NEK3-206ENST00000611833 PLA2G4DQ86XP0 818 aa20.13■□□□□ 0.81
NEK3-206ENST00000611833 DZIP3Q86Y13 1208 aaKnown RBP20.13■□□□□ 0.81
NEK3-206ENST00000611833 C8orf76Q96K31 380 aa20.13■□□□□ 0.81
NEK3-206ENST00000611833 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.13■□□□□ 0.81
NEK3-206ENST00000611833 EXOC5O00471 708 aa20.13■□□□□ 0.81
NEK3-206ENST00000611833 CPLX1O14810 134 aa20.13■□□□□ 0.81
NEK3-206ENST00000611833 FAM160A1Q05DH4 1040 aa20.13■□□□□ 0.81
NEK3-206ENST00000611833 SNW1Q13573 536 aaKnown RBP20.13■□□□□ 0.81
NEK3-206ENST00000611833 STX1AQ16623 288 aa20.13■□□□□ 0.81
NEK3-206ENST00000611833 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.13■□□□□ 0.81
NEK3-206ENST00000611833 FSIP1Q8NA03 581 aa20.13■□□□□ 0.81
NEK3-206ENST00000611833 UBE2Q2Q8WVN8 375 aa20.13■□□□□ 0.81
NEK3-206ENST00000611833 MYO5AQ9Y4I1 1855 aaKnown RBP20.13■□□□□ 0.81
NEK3-206ENST00000611833 SLC9C2Q5TAH2 1124 aa20.12■□□□□ 0.81
NEK3-206ENST00000611833 OTUD7BQ6GQQ9 843 aa20.12■□□□□ 0.81
NEK3-206ENST00000611833 PIH1D3Q9NQM4 214 aaKnown RBP20.12■□□□□ 0.81
NEK3-206ENST00000611833 PLCH1Q4KWH8 1693 aa20.12■□□□□ 0.81
NEK3-206ENST00000611833 ERVV-1B6SEH8 477 aa20.11■□□□□ 0.81
NEK3-206ENST00000611833 IL6STP40189 918 aaPredicted RBP20.11■□□□□ 0.81
NEK3-206ENST00000611833 ORC3Q9UBD5 711 aaPredicted RBP20.11■□□□□ 0.81
NEK3-206ENST00000611833 HPS5Q9UPZ3 1129 aa20.11■□□□□ 0.81
NEK3-206ENST00000611833 SLIT2O94813 1529 aa20.11■□□□□ 0.81
NEK3-206ENST00000611833 PHKA1P46020 1223 aa20.11■□□□□ 0.81
NEK3-206ENST00000611833 TRDNQ13061 729 aa20.11■□□□□ 0.81
NEK3-206ENST00000611833 CCDC102BQ68D86 513 aa20.11■□□□□ 0.81
NEK3-206ENST00000611833 RAB11FIP4Q86YS3 637 aa20.11■□□□□ 0.81
NEK3-206ENST00000611833 MAP7D2Q96T17 732 aa20.11■□□□□ 0.81
NEK3-206ENST00000611833 NBPF3Q9H094 633 aa20.11■□□□□ 0.81
NEK3-206ENST00000611833 RTEL1Q9NZ71 1219 aa20.11■□□□□ 0.81
NEK3-206ENST00000611833 ATRNO75882 1429 aa20.11■□□□□ 0.81
NEK3-206ENST00000611833 TTF1Q15361 905 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms