RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 POLA2Q14181 598 aa32.27■■■□□ 2.76
VEGFA-226ENST00000611736 DDX19BQ9UMR2 479 aa32.27■■■□□ 2.76
VEGFA-226ENST00000611736 POLR2AP24928 1970 aaKnown RBP32.27■■■□□ 2.76
VEGFA-226ENST00000611736 FAM205AQ6ZU69 1335 aa32.26■■■□□ 2.76
VEGFA-226ENST00000611736 TRAF5O00463 557 aa32.26■■■□□ 2.75
VEGFA-226ENST00000611736 FRAT2O75474 233 aaPredicted RBP32.26■■■□□ 2.75
VEGFA-226ENST00000611736 TFCP2Q12800 502 aa32.26■■■□□ 2.75
VEGFA-226ENST00000611736 G3BP1Q13283 466 aaKnown RBP eCLIP32.26■■■□□ 2.75
VEGFA-226ENST00000611736 SSH3Q8TE77 659 aa32.26■■■□□ 2.75
VEGFA-226ENST00000611736 GLIS2Q9BZE0 524 aaPredicted RBP32.26■■■□□ 2.75
VEGFA-226ENST00000611736 FMR1Q06787 632 aaKnown RBP eCLIP32.25■■■□□ 2.75
VEGFA-226ENST00000611736 PDE3AQ14432 1141 aa32.25■■■□□ 2.75
VEGFA-226ENST00000611736 ASTN2O75129 1339 aaPredicted RBP32.25■■■□□ 2.75
VEGFA-226ENST00000611736 F8W031 263 aaPredicted RBP32.24■■■□□ 2.75
VEGFA-226ENST00000611736 CHAF1AQ13111 956 aaPredicted RBP32.24■■■□□ 2.75
VEGFA-226ENST00000611736 SCARF1Q14162 830 aa32.24■■■□□ 2.75
VEGFA-226ENST00000611736 CEP85Q6P2H3 762 aa32.24■■■□□ 2.75
VEGFA-226ENST00000611736 HDAC9Q9UKV0 1011 aa32.24■■■□□ 2.75
VEGFA-226ENST00000611736 FKBP1AP62942 108 aaKnown RBP32.23■■■□□ 2.75
VEGFA-226ENST00000611736 MFSD14BQ5SR56 506 aa32.22■■■□□ 2.75
VEGFA-226ENST00000611736 KLRG1Q96E93 195 aa32.22■■■□□ 2.75
VEGFA-226ENST00000611736 GGA3Q9NZ52 723 aa32.22■■■□□ 2.75
VEGFA-226ENST00000611736 ADORA1P30542 326 aa32.21■■■□□ 2.75
VEGFA-226ENST00000611736 OS9Q13438 667 aaPredicted RBP32.21■■■□□ 2.75
VEGFA-226ENST00000611736 CDC37L1Q7L3B6 337 aa32.21■■■□□ 2.75
VEGFA-226ENST00000611736 USP48Q86UV5 1035 aa32.21■■■□□ 2.75
VEGFA-226ENST00000611736 DCPSQ96C86 337 aaKnown RBP32.21■■■□□ 2.75
VEGFA-226ENST00000611736 CREBZFQ9NS37 354 aa32.21■■■□□ 2.75
VEGFA-226ENST00000611736 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.21■■■□□ 2.75
VEGFA-226ENST00000611736 SURF6O75683 361 aaKnown RBP32.2■■■□□ 2.75
VEGFA-226ENST00000611736 TIMM10P62072 90 aa32.2■■■□□ 2.75
VEGFA-226ENST00000611736 ZBTB40Q9NUA8 1239 aa32.2■■■□□ 2.75
VEGFA-226ENST00000611736 AKAP2Q9Y2D5 859 aa32.2■■■□□ 2.75
VEGFA-226ENST00000611736 MYH13Q9UKX3 1938 aa32.2■■■□□ 2.74
VEGFA-226ENST00000611736 TRPM7Q96QT4 1865 aa32.19■■■□□ 2.74
VEGFA-226ENST00000611736 TMEM88BA6NKF7 163 aa32.19■■■□□ 2.74
VEGFA-226ENST00000611736 MMP14P50281 582 aa32.19■■■□□ 2.74
VEGFA-226ENST00000611736 NBPF9Q3BBW0 867 aa32.19■■■□□ 2.74
VEGFA-226ENST00000611736 KRT26Q7Z3Y9 468 aa32.19■■■□□ 2.74
VEGFA-226ENST00000611736 ARAP2Q8WZ64 1704 aa32.18■■■□□ 2.74
VEGFA-226ENST00000611736 A0A1B0GUL7 405 aa32.18■■■□□ 2.74
VEGFA-226ENST00000611736 ANGEL2Q5VTE6 544 aaKnown RBP32.18■■■□□ 2.74
VEGFA-226ENST00000611736 CHMP4BQ9H444 224 aaKnown RBP32.18■■■□□ 2.74
VEGFA-226ENST00000611736 ADM5C9JUS6 153 aa32.17■■■□□ 2.74
VEGFA-226ENST00000611736 PHKA1P46020 1223 aa32.17■■■□□ 2.74
VEGFA-226ENST00000611736 DLK2Q6UY11 383 aa32.17■■■□□ 2.74
VEGFA-226ENST00000611736 WNT10BO00744 389 aa32.16■■■□□ 2.74
VEGFA-226ENST00000611736 NEUROD6Q96NK8 337 aa32.16■■■□□ 2.74
VEGFA-226ENST00000611736 GNL3LQ9NVN8 582 aaKnown RBP32.16■■■□□ 2.74
VEGFA-226ENST00000611736 SULF1Q8IWU6 871 aa32.15■■■□□ 2.74
VEGFA-226ENST00000611736 TBC1D22AQ8WUA7 517 aa32.15■■■□□ 2.74
VEGFA-226ENST00000611736 XAGE2Q96GT9 111 aa32.15■■■□□ 2.74
VEGFA-226ENST00000611736 ZNF408Q9H9D4 720 aa32.15■■■□□ 2.74
VEGFA-226ENST00000611736 TTF2Q9UNY4 1162 aaKnown RBP32.15■■■□□ 2.74
VEGFA-226ENST00000611736 CELF2O95319 508 aaKnown RBP32.14■■■□□ 2.74
VEGFA-226ENST00000611736 RRP1P56182 461 aaKnown RBP32.14■■■□□ 2.74
VEGFA-226ENST00000611736 DLGAP5Q15398 846 aa32.14■■■□□ 2.74
VEGFA-226ENST00000611736 NOP58Q9Y2X3 529 aaKnown RBP32.14■■■□□ 2.74
VEGFA-226ENST00000611736 PCDHAC2Q9Y5I4 1007 aa32.14■■■□□ 2.74
VEGFA-226ENST00000611736 COL1A1P02452 1464 aaPredicted RBP32.13■■■□□ 2.73
VEGFA-226ENST00000611736 GRIK5Q16478 980 aa32.13■■■□□ 2.73
VEGFA-226ENST00000611736 CFAP100Q494V2 611 aa32.13■■■□□ 2.73
VEGFA-226ENST00000611736 CST9Q5W186 159 aa32.13■■■□□ 2.73
VEGFA-226ENST00000611736 CCDC102BQ68D86 513 aa32.13■■■□□ 2.73
VEGFA-226ENST00000611736 SCAF8Q9UPN6 1271 aaKnown RBP32.13■■■□□ 2.73
VEGFA-226ENST00000611736 ZBED3Q96IU2 234 aaPredicted RBP32.12■■■□□ 2.73
VEGFA-226ENST00000611736 PITPNM2Q9BZ72 1349 aa32.11■■■□□ 2.73
VEGFA-226ENST00000611736 RBM5P52756 815 aaKnown RBP eCLIP32.11■■■□□ 2.731e-9■□□□□ 9.1
VEGFA-226ENST00000611736 ABT1Q9ULW3 272 aaKnown RBP32.11■■■□□ 2.73
VEGFA-226ENST00000611736 RPAP2Q8IXW5 612 aaPredicted RBP32.1■■■□□ 2.73
VEGFA-226ENST00000611736 JMYQ8N9B5 988 aa32.1■■■□□ 2.73
VEGFA-226ENST00000611736 MTMR14Q8NCE2 650 aa32.1■■■□□ 2.73
VEGFA-226ENST00000611736 MKRN1Q9UHC7 482 aaKnown RBP32.1■■■□□ 2.73
VEGFA-226ENST00000611736 EXOC6BQ9Y2D4 811 aa32.1■■■□□ 2.73
VEGFA-226ENST00000611736 PCNTO95613 3336 aa32.09■■■□□ 2.73
VEGFA-226ENST00000611736 GORABQ5T7V8 394 aa32.09■■■□□ 2.73
VEGFA-226ENST00000611736 WDR66Q8TBY9 1149 aa32.09■■■□□ 2.73
VEGFA-226ENST00000611736 DENND2AQ9ULE3 1009 aa32.09■■■□□ 2.73
VEGFA-226ENST00000611736 TNNI3KQ59H18 835 aa32.08■■■□□ 2.73
VEGFA-226ENST00000611736 SIRT2Q8IXJ6 389 aa32.08■■■□□ 2.73
VEGFA-226ENST00000611736 FPGT-TNNI3KV9GXZ4 949 aa32.08■■■□□ 2.73
VEGFA-226ENST00000611736 SPDYE2BA6NHP3 402 aa32.07■■■□□ 2.72
VEGFA-226ENST00000611736 SEMA3EO15041 775 aa32.07■■■□□ 2.72
VEGFA-226ENST00000611736 HMMRO75330 724 aa32.07■■■□□ 2.72
VEGFA-226ENST00000611736 SPDYE6P0CI01 402 aa32.07■■■□□ 2.72
VEGFA-226ENST00000611736 SERPINA10Q9UK55 444 aa32.07■■■□□ 2.72
VEGFA-226ENST00000611736 RASGRF1Q13972 1273 aa32.06■■■□□ 2.72
VEGFA-226ENST00000611736 CDCA5Q96FF9 252 aa32.06■■■□□ 2.72
VEGFA-226ENST00000611736 PRMT6Q96LA8 375 aaPredicted RBP32.06■■■□□ 2.72
VEGFA-226ENST00000611736 GPR108Q9NPR9 543 aa32.06■■■□□ 2.72
VEGFA-226ENST00000611736 AOX1Q06278 1338 aa32.05■■■□□ 2.72
VEGFA-226ENST00000611736 CRKP46108 304 aa32.05■■■□□ 2.72
VEGFA-226ENST00000611736 SUGT1Q9Y2Z0 365 aa32.05■■■□□ 2.72
VEGFA-226ENST00000611736 CNTNAP1P78357 1384 aa32.05■■■□□ 2.72
VEGFA-226ENST00000611736 ECM29Q5VYK3 1845 aa32.05■■■□□ 2.72
VEGFA-226ENST00000611736 CLRN2A0PK11 232 aa32.04■■■□□ 2.72
VEGFA-226ENST00000611736 APOBEC3FQ8IUX4 373 aaKnown RBP32.04■■■□□ 2.72
VEGFA-226ENST00000611736 MYO1BO43795 1136 aa32.03■■■□□ 2.72
VEGFA-226ENST00000611736 ERC1Q8IUD2 1116 aa32.03■■■□□ 2.72
VEGFA-226ENST00000611736 HSP90AB4PQ58FF6 505 aa32.02■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms